BLASTX nr result

ID: Glycyrrhiza23_contig00020715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020715
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   161   6e-38
ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|3...   130   1e-28
gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago tru...   130   1e-28
ref|XP_002526753.1| pentatricopeptide repeat-containing protein,...   114   1e-23
ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/89 (85%), Positives = 81/89 (91%)
 Frame = +2

Query: 173 PPNPIPVTVSVADFGAAGDGVRYDTVPIQSAIDSCPPGGPCQVTFPALGKYLTATVFLKS 352
           P NPIPVT+SVADFGAAGDG+RYDT  IQSAI+SCP G PC VTFPA GKYLTATVFLKS
Sbjct: 24  PLNPIPVTLSVADFGAAGDGLRYDTEAIQSAINSCPEGDPCHVTFPAPGKYLTATVFLKS 83

Query: 353 GVVLNVEAGATILGGARLEDYPQESWRWY 439
           GVVLNVE+GATILGG RLEDYP+ESWRWY
Sbjct: 84  GVVLNVESGATILGGTRLEDYPEESWRWY 112


>ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|355500208|gb|AES81411.1|
           Polygalacturonase [Medicago truncatula]
          Length = 482

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/87 (68%), Positives = 71/87 (81%)
 Frame = +2

Query: 179 NPIPVTVSVADFGAAGDGVRYDTVPIQSAIDSCPPGGPCQVTFPALGKYLTATVFLKSGV 358
           NP  VT SV ++GA GDG+ YDTV IQ+AIDSCP   PC++TFP+ G YLTAT+FL+SGV
Sbjct: 42  NPTTVTFSVTEYGAIGDGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGV 101

Query: 359 VLNVEAGATILGGARLEDYPQESWRWY 439
           VLNVE GATILGG R +DYP+ES RWY
Sbjct: 102 VLNVEPGATILGGPRQKDYPKESSRWY 128


>gb|ABN08146.1| Virulence factor, pectin lyase fold [Medicago truncatula]
          Length = 205

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/87 (68%), Positives = 71/87 (81%)
 Frame = +2

Query: 179 NPIPVTVSVADFGAAGDGVRYDTVPIQSAIDSCPPGGPCQVTFPALGKYLTATVFLKSGV 358
           NP  VT SV ++GA GDG+ YDTV IQ+AIDSCP   PC++TFP+ G YLTAT+FL+SGV
Sbjct: 42  NPTTVTFSVTEYGAIGDGIHYDTVSIQTAIDSCPYSIPCRITFPSPGNYLTATIFLRSGV 101

Query: 359 VLNVEAGATILGGARLEDYPQESWRWY 439
           VLNVE GATILGG R +DYP+ES RWY
Sbjct: 102 VLNVEPGATILGGPRQKDYPKESSRWY 128


>ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533942|gb|EEF35667.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 818

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/83 (65%), Positives = 64/83 (77%)
 Frame = +2

Query: 191 VTVSVADFGAAGDGVRYDTVPIQSAIDSCPPGGPCQVTFPALGKYLTATVFLKSGVVLNV 370
           +T+SV DFGA G+G  YDTVPIQS ID+CPP   C V FP  GKYLTAT+ LKS VVL +
Sbjct: 39  ITLSVTDFGATGNGHDYDTVPIQSTIDACPPTTTCHVKFPP-GKYLTATIHLKSKVVLEI 97

Query: 371 EAGATILGGARLEDYPQESWRWY 439
           + GAT+LGG R+EDYP+E  RWY
Sbjct: 98  QKGATLLGGTRMEDYPKEFSRWY 120


>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/91 (61%), Positives = 66/91 (72%), Gaps = 3/91 (3%)
 Frame = +2

Query: 176 PNPIPVTVSVADFGAAGDGVRYDTVPIQSAIDSCPPGGP---CQVTFPALGKYLTATVFL 346
           P+P P T+SV DFGA GDG+ YDT  IQS I+SCP   P   C V FP  G YLTAT+ L
Sbjct: 6   PHPTPTTLSVTDFGAIGDGIHYDTEAIQSTINSCPTTPPTKACHVNFPP-GIYLTATIHL 64

Query: 347 KSGVVLNVEAGATILGGARLEDYPQESWRWY 439
           KS VVLN++ GAT+LGG +LEDYP+E  RWY
Sbjct: 65  KSNVVLNIQEGATLLGGTKLEDYPKEFNRWY 95


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