BLASTX nr result

ID: Glycyrrhiza23_contig00020701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020701
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...   106   2e-21
ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago t...    94   1e-17
emb|CBI28799.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...    86   4e-15
emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]    86   4e-15

>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/87 (64%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
 Frame = +2

Query: 2   SYTPFKHLXXXXXXXXXXXXXX----HPFETEITALLKSPQPEIELSAEGVDMEMNDSYV 169
           SYTPFKHL                  HP+E EITALLK+P PEIEL  E  D+EM DSYV
Sbjct: 61  SYTPFKHLINDDAEFSCFLTENASNSHPYEAEITALLKNPLPEIELGTEIADLEMKDSYV 120

Query: 170 WVDTEMQLKELVDVLTKERFFAVDTEQ 250
           WV TEMQLKELVDVL++ERFFAVDTEQ
Sbjct: 121 WVHTEMQLKELVDVLSEERFFAVDTEQ 147


>ref|XP_003605934.1| Exosome complex exonuclease RRP6 [Medicago truncatula]
           gi|355506989|gb|AES88131.1| Exosome complex exonuclease
           RRP6 [Medicago truncatula]
          Length = 974

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/61 (75%), Positives = 54/61 (88%)
 Frame = +2

Query: 68  HPFETEITALLKSPQPEIELSAEGVDMEMNDSYVWVDTEMQLKELVDVLTKERFFAVDTE 247
           HPF+ EITALL++ QPEIEL AE   +EMNDSYVWVDTEMQLK+LV+VL+KE+FF VDTE
Sbjct: 123 HPFQAEITALLQNHQPEIELGAE--KLEMNDSYVWVDTEMQLKKLVNVLSKEKFFGVDTE 180

Query: 248 Q 250
           Q
Sbjct: 181 Q 181


>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/83 (50%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   SYTPFKHLXXXXXXXXXXXXXXHPFETEITALLKSPQPEIELSAEGVDMEMNDSYVWVDT 181
           SY+ FKHL              HP+E EI+ALL++ + E     E +D++++DSYVWV+T
Sbjct: 60  SYSAFKHLKLGESNSETSLHS-HPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVET 118

Query: 182 EMQLKELVDVLTKERFFAVDTEQ 250
           E+QLKEL DVL+K+R FAVDTEQ
Sbjct: 119 ELQLKELADVLSKQRVFAVDTEQ 141


>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/83 (50%), Positives = 57/83 (68%)
 Frame = +2

Query: 2   SYTPFKHLXXXXXXXXXXXXXXHPFETEITALLKSPQPEIELSAEGVDMEMNDSYVWVDT 181
           SY+ FKHL              HP+E EI+ALL++ + E     E +D++++DSYVWV+T
Sbjct: 60  SYSAFKHLKLGESNSETSLHS-HPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVET 118

Query: 182 EMQLKELVDVLTKERFFAVDTEQ 250
           E+QLKEL DVL+K+R FAVDTEQ
Sbjct: 119 ELQLKELADVLSKQRVFAVDTEQ 141


>emb|CAN79186.1| hypothetical protein VITISV_035853 [Vitis vinifera]
          Length = 951

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/83 (51%), Positives = 58/83 (69%)
 Frame = +2

Query: 2   SYTPFKHLXXXXXXXXXXXXXXHPFETEITALLKSPQPEIELSAEGVDMEMNDSYVWVDT 181
           SY+ FKHL              HP+E EI+ALL++ + E     E +D++++DSYVWV+T
Sbjct: 60  SYSAFKHLKLGESXSETSLHS-HPYEAEISALLENAEIEFSFGTESMDLKISDSYVWVET 118

Query: 182 EMQLKELVDVLTKERFFAVDTEQ 250
           E+QLKEL DVL+K+R FAVDTEQ
Sbjct: 119 ELQLKELADVLSKQRVFAVDTEQ 141


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