BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020694
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar...    83   2e-14
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14

>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  129 bits (324), Expect = 3e-28
 Identities = 63/91 (69%), Positives = 72/91 (79%), Gaps = 4/91 (4%)
 Frame = -3

Query: 262 MNSPMLKPKTVPCHP----PQLRMCKSMRELKQVHAFLIKTAQTHDMTVATELLSLCATS 95
           MN+ M +P T   +P    PQ++ CKSMRELKQVHAFL+KT QTHD  +ATE+L L ATS
Sbjct: 1   MNALMFQPNTASYYPRLDVPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATS 60

Query: 94  GFRDTGYALSVFDQMPEPNCFAWNTVIRALA 2
            FRD GYALSVFDQ+PE NCFAWNTVIRALA
Sbjct: 61  DFRDIGYALSVFDQLPERNCFAWNTVIRALA 91


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/91 (48%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
 Frame = -3

Query: 262 MNSPMLKPKTVPCHP----PQLRMCKSMRELKQVHAFLIKTAQTHDMTVATELLSLCATS 95
           MN+ + KP   P HP    PQ+  CK+ R LKQ+HA  IKT Q H    A ELL     S
Sbjct: 1   MNTIIHKPSPSPNHPSSLFPQISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLS 60

Query: 94  GFRDTGYALSVFDQMPEPNCFAWNTVIRALA 2
             R+  YA   F Q+  PNCF+WNT+IRALA
Sbjct: 61  TQREIKYARKFFSQIHHPNCFSWNTIIRALA 91


>ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|15810559|gb|AAL07167.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|332008359|gb|AED95742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
 Frame = -3

Query: 259 NSPMLKPKTVPCHP-PQLRMCKSMRELKQVHAFLIKTAQTHDMTVATELLSLCATSGF-- 89
           NSP   P + P    PQ+  C+++R+L Q+HA  IK+ Q  D   A E+L  CATS    
Sbjct: 13  NSPASSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHH 72

Query: 88  RDTGYALSVFDQMPEPNCFAWNTVIRALA 2
           RD  YA  +F+QMP+ NCF+WNT+IR  +
Sbjct: 73  RDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
 Frame = -3

Query: 262 MNSPMLKPKTVPCHPPQ--------LRMCKSMRELKQVHAFLIKTAQTHDMTVATELLSL 107
           MNS +  P       PQ           CK+ R+LKQ+HA  IKT Q  D   A E++  
Sbjct: 1   MNSTIYNPNRTLNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60

Query: 106 CATSGFRDTGYALSVFDQMPEPNCFAWNTVIRALA 2
           CA S  RD  YA +VF QMPEPNCF WNT++R LA
Sbjct: 61  CAFSS-RDIDYARAVFRQMPEPNCFCWNTILRILA 94


>ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 44/95 (46%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
 Frame = -3

Query: 262 MNSPMLKPKTVPCHPPQ--------LRMCKSMRELKQVHAFLIKTAQTHDMTVATELLSL 107
           MNS +  P       PQ           CK+ R+LKQ+HA  IKT Q  D   A E++  
Sbjct: 1   MNSTIYNPNRTFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKF 60

Query: 106 CATSGFRDTGYALSVFDQMPEPNCFAWNTVIRALA 2
           CA S  RD  YA +VF QMPEPNCF WNT++R LA
Sbjct: 61  CAFSS-RDIDYARAVFRQMPEPNCFCWNTILRVLA 94