BLASTX nr result

ID: Glycyrrhiza23_contig00020693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020693
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003613698.1| Pentatricopeptide repeat-containing protein ...   128   6e-28
ref|XP_003528020.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   125   4e-27
ref|XP_003611821.1| Pentatricopeptide repeat-containing protein ...   125   4e-27
emb|CBI29825.3| unnamed protein product [Vitis vinifera]              114   6e-24

>ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/88 (75%), Positives = 72/88 (81%)
 Frame = -3

Query: 265 ALYANSFKEGIVPDVVLYTIMIRGLSAEGRVGEAVKMLDEMTWGGLTPDAYCYNAIIKGF 86
           A Y   FK+GIVPDVVLYTI+IRGLS+EGRVGEA KML EM   GL PDA CYN IIKG 
Sbjct: 104 AWYGRMFKKGIVPDVVLYTILIRGLSSEGRVGEAAKMLGEMIQIGLVPDAVCYNEIIKGL 163

Query: 85  CNIGLLDRARSLQLEISEHDQFHNACTY 2
           C++GLLDRARSLQLEISEH  FHN CT+
Sbjct: 164 CDVGLLDRARSLQLEISEHQGFHNVCTH 191


>ref|XP_003613698.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515033|gb|AES96656.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 749

 Score =  128 bits (321), Expect = 6e-28
 Identities = 63/88 (71%), Positives = 73/88 (82%)
 Frame = -3

Query: 265 ALYANSFKEGIVPDVVLYTIMIRGLSAEGRVGEAVKMLDEMTWGGLTPDAYCYNAIIKGF 86
           A Y   FK+GIVPDVVLY IMIRGLS EGRVGEA KML+EMT  GLTPDAYCYNA+I+G 
Sbjct: 280 AWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGL 339

Query: 85  CNIGLLDRARSLQLEISEHDQFHNACTY 2
           C++GLL+RA+SL+LEISE    HN CT+
Sbjct: 340 CDVGLLNRAQSLRLEISE----HNVCTH 363


>ref|XP_003528020.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g79540-like [Glycine max]
          Length = 535

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/80 (76%), Positives = 65/80 (81%)
 Frame = -3

Query: 241 EGIVPDVVLYTIMIRGLSAEGRVGEAVKMLDEMTWGGLTPDAYCYNAIIKGFCNIGLLDR 62
           E I PDVVLYTI+IRGLS EGRVGEA KML EMT  GL PD  CYN IIKG CN+GLLD+
Sbjct: 16  ESIEPDVVLYTILIRGLSREGRVGEAGKMLGEMTQRGLVPDVVCYNEIIKGLCNVGLLDQ 75

Query: 61  ARSLQLEISEHDQFHNACTY 2
           ARSLQLEISEH  FHN CT+
Sbjct: 76  ARSLQLEISEHRXFHNVCTH 95


>ref|XP_003611821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513156|gb|AES94779.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 749

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/88 (70%), Positives = 71/88 (80%)
 Frame = -3

Query: 265 ALYANSFKEGIVPDVVLYTIMIRGLSAEGRVGEAVKMLDEMTWGGLTPDAYCYNAIIKGF 86
           A Y   FKEGIVPDVVLY IMIRGLS EGRVGEA KML+EMT  GLTPD+YCYNA+I+G 
Sbjct: 280 ACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGL 339

Query: 85  CNIGLLDRARSLQLEISEHDQFHNACTY 2
           C++ LL+RA+SL LEISE    HN CT+
Sbjct: 340 CDVDLLNRAQSLSLEISE----HNVCTH 363


>emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -3

Query: 247 FKEGIVPDVVLYTIMIRGLSAEGRVGEAVKMLDEMTWGGLTPDAYCYNAIIKGFCNIGLL 68
           FK GI PDVVLYTI+IRG    G V  A+ ML++MT  GL+PD YCYNA+IKGFC++GLL
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392

Query: 67  DRARSLQLEISEHDQFHNACTY 2
           D+ARSLQLEIS++D F  +CTY
Sbjct: 393 DKARSLQLEISKNDCFPTSCTY 414


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