BLASTX nr result

ID: Glycyrrhiza23_contig00020687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020687
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [...    99   3e-19
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [...    99   4e-19
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat...    95   5e-18
gb|ACJ86221.1| unknown [Medicago truncatula]                           95   5e-18
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...    89   4e-16

>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 57/92 (61%), Positives = 62/92 (67%), Gaps = 9/92 (9%)
 Frame = +3

Query: 3    ELVVCKKKRNEREKSLVKTRIXXXXXXXXXXXXXXXXRSPGSGSTPKDS-----SRLAQP 167
            +LVVCKKKRNER+KSL K R                 RSPGSGSTPKD+      R++QP
Sbjct: 2134 QLVVCKKKRNERDKSLGKGRTGSTGPVSPPSAAI---RSPGSGSTPKDARLAQQGRVSQP 2190

Query: 168  ----NGSGGSVGWANPVKRLRTDSGKRRPSHM 251
                NGS GSVGWANPVKRLRTDSGKRRPSHM
Sbjct: 2191 SQHSNGSAGSVGWANPVKRLRTDSGKRRPSHM 2222


>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2222

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/93 (62%), Positives = 62/93 (66%), Gaps = 10/93 (10%)
 Frame = +3

Query: 3    ELVVCKKKRNEREKSLVKTRIXXXXXXXXXXXXXXXXRSPGSGSTPKDSSRLAQP----- 167
            +LVVCKKKRN+R+KSL K R                 RSPGSGSTPKD+ RLAQ      
Sbjct: 2135 QLVVCKKKRNDRDKSLGKGRTGSTGPISPPSAI----RSPGSGSTPKDA-RLAQQGRGSQ 2189

Query: 168  -----NGSGGSVGWANPVKRLRTDSGKRRPSHM 251
                 NGSGGSVGWANPVKRLRTDSGKRRPSHM
Sbjct: 2190 PSQHSNGSGGSVGWANPVKRLRTDSGKRRPSHM 2222


>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
            gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
            [Medicago truncatula]
          Length = 2175

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/93 (58%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
 Frame = +3

Query: 3    ELVVCKKKRNEREKSLVKTRIXXXXXXXXXXXXXXXXRSPGSGSTPKDSSRLAQPNG--- 173
            ELVVCKK+RNEREKSLVK+R                 RSPG+GS PKD     Q  G   
Sbjct: 2092 ELVVCKKRRNEREKSLVKSRTGPVSPSM---------RSPGAGSVPKDVRLTQQTQGWTG 2142

Query: 174  -------SGGSVGWANPVKRLRTDSGKRRPSHM 251
                   +GGSVGWANPVKRLRTDSGKRRPSHM
Sbjct: 2143 QPSSQQPNGGSVGWANPVKRLRTDSGKRRPSHM 2175


>gb|ACJ86221.1| unknown [Medicago truncatula]
          Length = 218

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/93 (58%), Positives = 58/93 (62%), Gaps = 10/93 (10%)
 Frame = +3

Query: 3   ELVVCKKKRNEREKSLVKTRIXXXXXXXXXXXXXXXXRSPGSGSTPKDSSRLAQPNG--- 173
           ELVVCKK+RNEREKSLVK+R                 RSPG+GS PKD     Q  G   
Sbjct: 135 ELVVCKKRRNEREKSLVKSRTGPVSPSM---------RSPGAGSVPKDVRLTQQTQGWTG 185

Query: 174 -------SGGSVGWANPVKRLRTDSGKRRPSHM 251
                  +GGSVGWANPVKRLRTDSGKRRPSHM
Sbjct: 186 QPSSQQPNGGSVGWANPVKRLRTDSGKRRPSHM 218


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/97 (53%), Positives = 58/97 (59%), Gaps = 15/97 (15%)
 Frame = +3

Query: 3    ELVVCKKKRNEREKSLVKTRIXXXXXXXXXXXXXXXXRSPGSGSTPKDSSRLAQ------ 164
            ELVVCKK+RN+REKS VK +                 R+PG  S PK++ RL Q      
Sbjct: 2141 ELVVCKKRRNDREKSAVKPKTGPVSPSSM--------RTPGPSSVPKEA-RLTQQGSHAQ 2191

Query: 165  ---------PNGSGGSVGWANPVKRLRTDSGKRRPSH 248
                     PNGSGGSVGWANPVKRLRTDSGKRRPSH
Sbjct: 2192 GWAGQPSQQPNGSGGSVGWANPVKRLRTDSGKRRPSH 2228