BLASTX nr result

ID: Glycyrrhiza23_contig00020682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020682
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550166.1| PREDICTED: pleiotropic drug resistance prote...    77   2e-12
ref|XP_003588699.1| Pleiotropic drug resistance ABC transporter ...    74   1e-11
ref|XP_003549246.1| PREDICTED: pleiotropic drug resistance prote...    73   3e-11
ref|XP_003545503.1| PREDICTED: pleiotropic drug resistance prote...    71   8e-11
gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]      64   1e-08

>ref|XP_003550166.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1447

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = +3

Query: 168 MESSEVVSRVDSLRASSSNMWRNSSMDVFSTSEREDDEEALKWAA 302
           MESS++ SRVDS RAS SN+WRN+SMDVFSTSEREDDEEALKWAA
Sbjct: 1   MESSDI-SRVDSARASGSNIWRNNSMDVFSTSEREDDEEALKWAA 44


>ref|XP_003588699.1| Pleiotropic drug resistance ABC transporter family protein
           [Medicago truncatula] gi|355477747|gb|AES58950.1|
           Pleiotropic drug resistance ABC transporter family
           protein [Medicago truncatula]
          Length = 1454

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/46 (86%), Positives = 44/46 (95%), Gaps = 1/46 (2%)
 Frame = +3

Query: 168 MESSEVVSRVDSLR-ASSSNMWRNSSMDVFSTSEREDDEEALKWAA 302
           MES+EV SRVDSLR ASSSN+WRN+SM+VFSTSEREDDEEALKWAA
Sbjct: 1   MESNEV-SRVDSLRRASSSNIWRNNSMNVFSTSEREDDEEALKWAA 45


>ref|XP_003549246.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 119

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/45 (80%), Positives = 40/45 (88%)
 Frame = +3

Query: 168 MESSEVVSRVDSLRASSSNMWRNSSMDVFSTSEREDDEEALKWAA 302
           ME S++ SRVDS RAS  N+WRN+SMDVFSTSEREDDEEALKWAA
Sbjct: 1   MEGSDI-SRVDSARASGYNIWRNNSMDVFSTSEREDDEEALKWAA 44


>ref|XP_003545503.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1447

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/39 (82%), Positives = 37/39 (94%)
 Frame = +3

Query: 186 VSRVDSLRASSSNMWRNSSMDVFSTSEREDDEEALKWAA 302
           +SRVDS RAS SN+WRN++MDVFSTSEREDDE+ALKWAA
Sbjct: 6   ISRVDSARASGSNIWRNNNMDVFSTSEREDDEDALKWAA 44


>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
          Length = 1452

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
 Frame = +3

Query: 168 MESSEVVSRVDSLRASSSNMWRNSSMDVFSTSERE-DDEEALKWAA 302
           ME  E + RV S R SSSN+WRNS+MDVFS S RE DDEEALKWAA
Sbjct: 1   MEGGEELFRVSSARLSSSNVWRNSAMDVFSRSSREADDEEALKWAA 46


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