BLASTX nr result

ID: Glycyrrhiza23_contig00020624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020624
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323859.1| condensin complex components subunit [Populu...   236   1e-60
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   234   4e-60
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              234   4e-60
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   233   9e-60
ref|XP_003554891.1| PREDICTED: structural maintenance of chromos...   233   2e-59

>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1256

 Score =  236 bits (603), Expect = 1e-60
 Identities = 119/121 (98%), Positives = 120/121 (99%)
 Frame = -1

Query: 363 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 184
           GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+DLDDGTYEA
Sbjct: 67  GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTYEA 126

Query: 183 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 4
           V GSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 127 VSGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 186

Query: 3   M 1
           M
Sbjct: 187 M 187


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/121 (97%), Positives = 119/121 (98%)
 Frame = -1

Query: 363 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 184
           GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA
Sbjct: 303 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 362

Query: 183 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 4
           VPGSDFVI RVAF+DNSSKYYINDR SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 363 VPGSDFVIARVAFQDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 422

Query: 3   M 1
           M
Sbjct: 423 M 423


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  234 bits (598), Expect = 4e-60
 Identities = 118/121 (97%), Positives = 119/121 (98%)
 Frame = -1

Query: 363 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 184
           GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA
Sbjct: 64  GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 123

Query: 183 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 4
           VPGSDFVI RVAF+DNSSKYYINDR SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 124 VPGSDFVIARVAFQDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 183

Query: 3   M 1
           M
Sbjct: 184 M 184


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1319

 Score =  233 bits (595), Expect = 9e-60
 Identities = 118/121 (97%), Positives = 119/121 (98%)
 Frame = -1

Query: 363 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 184
           GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVD DDGTYEA
Sbjct: 136 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEA 195

Query: 183 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 4
           V GSDFVITRVAFRDNSSKYYINDR+SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 196 VAGSDFVITRVAFRDNSSKYYINDRTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 255

Query: 3   M 1
           M
Sbjct: 256 M 256


>ref|XP_003554891.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1242

 Score =  233 bits (593), Expect = 2e-59
 Identities = 117/121 (96%), Positives = 119/121 (98%)
 Frame = -1

Query: 363 GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEA 184
           GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVD DDGTYEA
Sbjct: 59  GKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEA 118

Query: 183 VPGSDFVITRVAFRDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 4
           VPGSDFVITRVAFRDNSSKYYIN+ +SNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL
Sbjct: 119 VPGSDFVITRVAFRDNSSKYYINNHTSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISL 178

Query: 3   M 1
           M
Sbjct: 179 M 179


Top