BLASTX nr result

ID: Glycyrrhiza23_contig00020591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020591
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|2...   119   9e-25
ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containi...   108   3e-21
ref|XP_002528136.1| conserved hypothetical protein [Ricinus comm...   100   5e-19
ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containi...    89   2e-15
ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [S...    67   9e-09

>ref|XP_002297916.1| predicted protein [Populus trichocarpa] gi|222845174|gb|EEE82721.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  119 bits (299), Expect = 9e-25
 Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 2/179 (1%)
 Frame = -2

Query: 945 SNPPLHSLDLSPLIHSLTTQHDLTQTMSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXX 766
           +NPP  SL  S L HSLT+Q D+T+ MSLLT L HTPQ+H ++SP+              
Sbjct: 84  ANPPPKSLSFSILTHSLTSQPDMTKPMSLLTILRHTPQAHSHLSPM--NTMLITSYIKKK 141

Query: 765 SPNHALKILRWLQRPGSPCPPDHTVYTLLIPGLCRHGLLLHALTAFRDMIAGGGVHSVPS 586
            P  ALK+  W+ RPGSPC  +  V+ +L+ GLC  G +L  L   +DM+      SV  
Sbjct: 142 RPKEALKVYNWMLRPGSPCKVEKIVFCVLVNGLCEIGWVLEGLKVLKDMV------SVGF 195

Query: 585 LPSPDSAAQSLYRGLLRVARVNEALELNAALSCLARD--PQGPERLLHVLDRIITQWTD 415
           LP      + +YR LL  ARV EA+EL+ AL     D   +G ++++ +LD +I  W++
Sbjct: 196 LPI-GGLKERVYRSLLSEARVKEAVELDKALCDCFEDVSGEGGKKVIDLLDSLIRNWSE 253


>ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449471407|ref|XP_004153300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449474047|ref|XP_004154059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449503375|ref|XP_004161971.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 258

 Score =  108 bits (269), Expect = 3e-21
 Identities = 71/180 (39%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
 Frame = -2

Query: 945 SNPPLHSLDLSPLIHSLTTQHDLTQTMSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXX 766
           +NP LHSL LS L HSL +Q D   TMSLLT L H P +  Y +PI              
Sbjct: 89  TNPSLHSLSLSVLSHSLASQSDFALTMSLLTRLKHHPNALLYSTPIVTMLISSYCKRRKS 148

Query: 765 SPNHALKILRWLQRPGSPCPPDHTVYTLLIPGLCRHGLLLHALTAFRDMIAGGGVHSVPS 586
               ALK+  W+ RPGSPC P+  VY  LI GL R G+   AL   R+MI    V     
Sbjct: 149 --KEALKLFHWMLRPGSPCKPEERVYKTLIAGLYRKGMTFDALKVLRNMIDSNLV----- 201

Query: 585 LPSPDSAAQS-LYRGLLRVARVNEALELNAALSCLA--RDPQGPERLLHVLDRIITQWTD 415
              PD   ++ ++R LL+ A + EA+E N AL+ +          R+  +L+RIIT W D
Sbjct: 202 ---PDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSELLNRIITNWID 258


>ref|XP_002528136.1| conserved hypothetical protein [Ricinus communis]
           gi|223532434|gb|EEF34227.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  100 bits (249), Expect = 5e-19
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
 Frame = -2

Query: 879 LTQTMSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXXSPNHALKILRWLQRPGSPCPPD 700
           +T+ +SLLT L HTPQ+H Y++PI               P  A K+ +W+ RPGSPC  +
Sbjct: 1   MTKPVSLLTILRHTPQAHDYLTPITTMLITSYVKRKR--PKEAFKVYQWMLRPGSPCRVE 58

Query: 699 HTVYTLLIPGLCRHGLLLHALTAFRDMIAGGGVHSVPSLPSPDSAAQSLYRGLLRVARVN 520
             V+  L+ G C  GL+L  L   RDM+  G V  V          + +YR LL  ARV 
Sbjct: 59  KIVFLALVNGFCEFGLVLEGLRILRDMVDVGFVPGV-------RLRRRVYRSLLMEARVR 111

Query: 519 EALELNAALSCLAR-DPQGPERLLHVLDRIITQWTD 415
           EA+EL+ AL   A  D  G  +L  +LD +I  WT+
Sbjct: 112 EAVELDKALCFYANGDVDGVSKLRKLLDPVIRNWTE 147


>ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 142

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 52/151 (34%), Positives = 75/151 (49%)
 Frame = -2

Query: 867 MSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXXSPNHALKILRWLQRPGSPCPPDHTVY 688
           M+LLT L H   +H  + PI               P  A K+  W+ RP S C P    Y
Sbjct: 1   MALLTRLKHNQFAHYSLRPITTLLISSYFKKRR--PKEAFKVFNWMSRPDSHCTPHVAAY 58

Query: 687 TLLIPGLCRHGLLLHALTAFRDMIAGGGVHSVPSLPSPDSAAQSLYRGLLRVARVNEALE 508
           +LL+ G CR+G +L AL   R M+           P+ D   + +YR LLR AR+ EA E
Sbjct: 59  SLLVHGFCRNGFVLEALKVLRAMV------GADMAPAADLRTR-VYRSLLREARIGEAKE 111

Query: 507 LNAALSCLARDPQGPERLLHVLDRIITQWTD 415
           L+A L C+    +G  ++ ++LDR+I  W +
Sbjct: 112 LDAVLRCVGDGGEGFGKVANLLDRMIGNWVE 142


>ref|XP_002455958.1| hypothetical protein SORBIDRAFT_03g027950 [Sorghum bicolor]
           gi|241927933|gb|EES01078.1| hypothetical protein
           SORBIDRAFT_03g027950 [Sorghum bicolor]
          Length = 231

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 52/168 (30%), Positives = 76/168 (45%)
 Frame = -2

Query: 924 LDLSPLIHSLTTQHDLTQTMSLLTHLLHTPQSHPYISPIXXXXXXXXXXXXXXSPNHALK 745
           L L  L   L +   L+   +LLT L H P + P  SP+                  A  
Sbjct: 76  LPLDSLAAHLASIPTLSPAFALLTALRHHP-ARP--SPLLLASPLLGSLLSLRRARDASS 132

Query: 744 ILRWLQRPGSPCPPDHTVYTLLIPGLCRHGLLLHALTAFRDMIAGGGVHSVPSLPSPDSA 565
           +LRWL RP SP  PD   Y   + GLCR      AL A R+M A G       LP+    
Sbjct: 133 VLRWLCRPDSPRRPDAATYADAVVGLCRLEDPRAALAALREMAADG-------LPATREL 185

Query: 564 AQSLYRGLLRVARVNEALELNAALSCLARDPQGPERLLHVLDRIITQW 421
            +++   +L+ AR+ EA  L  AL    R P+   +L+ ++D++++ W
Sbjct: 186 REAVRDAMLQDARIEEAWALEEAL----RQPEETGKLVELIDKLLSAW 229


Top