BLASTX nr result
ID: Glycyrrhiza23_contig00020565
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00020565
(901 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera] 429 e-118
dbj|BAK61850.1| PPR containing protein [Citrus unshiu] 383 e-104
ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|2... 375 e-101
ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containi... 317 2e-84
ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi... 277 2e-72
>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
Length = 912
Score = 429 bits (1103), Expect = e-118
Identities = 196/300 (65%), Positives = 247/300 (82%)
Frame = -2
Query: 900 HHALYFFNWASNPIPNPNNYSHPRSCYAAITDVLLSHSLFSTAHSLLRRSNKLSDPIISR 721
+HAL+FFNWASNP PNPNNYSH CY AITD+L+SH LFSTA SLL+ ++LSD ++
Sbjct: 128 YHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAK 187
Query: 720 FIAAFGDRGDIRSAIHWFHKAKTISRGHCEFSSNAILGVLVKANRVNLAKAIYDQVLSEG 541
F+ A+GDRGDIR AIHWFH+AK + G C FS NAILGV VKANR+ LA+A++DQ++ EG
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEG 247
Query: 540 ILKPDVFTYTTMIRGFCKMGMVESALQVFDEMRCEPNTVTYNTLIHGFCKKGDVEGAKRV 361
++KPDV TYTT+IRG+CKMGM+E+A VFDEM C+PN VTYNT+I+GFCKKG +E A ++
Sbjct: 248 VVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKI 307
Query: 360 YNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLS 181
+++ ET+ C PD VT+TTLIDGY ++GE +EA+ M+EM+ + C PNV+TYNAI+ GL
Sbjct: 308 VDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLC 367
Query: 180 LSGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPDVK 1
L+GNVDEAK+MMTRMRLNGLKDNVAT+TSILKG C+VG+ DDA +HLKEMV GM D K
Sbjct: 368 LNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAK 427
Score = 67.0 bits (162), Expect = 6e-09
Identities = 64/279 (22%), Positives = 122/279 (43%), Gaps = 41/279 (14%)
Frame = -2
Query: 717 IAAFGDRGDIRSAIHWFHKAKTISRGHCE---FSSNAILGVLVKANRVNLAKAIYDQVLS 547
I + RG++ A+ + + +SR +CE + NAI+ L V+ AK + ++
Sbjct: 328 IDGYCKRGELEEAMKYMEEM--VSR-NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRL 384
Query: 546 EGILKPDVFTYTTMIRGFCKMGMVESALQVFDEM---RCEPNTVTYNTLIHGFCKKGDVE 376
G LK +V T+T++++G C +G ++ A + EM E + Y +++ +CK G +
Sbjct: 385 NG-LKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKAD 443
Query: 375 GA-------------------KRVYNRLLETKS---------------CKPDVVTFTTLI 298
A V+ L+E+ C P+ ++++T+I
Sbjct: 444 DAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVI 503
Query: 297 DGYSR-KGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLSLSGNVDEAKKMMTRMRLNGL 121
DG + KG E + +M G + + Y+ +V+G GN D A ++ M G
Sbjct: 504 DGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGY 563
Query: 120 KDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPDV 4
N+ + + +KG ++ + K +EM R D+
Sbjct: 564 VINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDI 602
>dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 383 bits (984), Expect = e-104
Identities = 173/300 (57%), Positives = 232/300 (77%)
Frame = -2
Query: 900 HHALYFFNWASNPIPNPNNYSHPRSCYAAITDVLLSHSLFSTAHSLLRRSNKLSDPIISR 721
+HAL+FFNWASNP PNPN Y H CY AITDVLLSHSL S A SLL+ SNKLSD IS+
Sbjct: 69 YHALFFFNWASNPNPNPNKYHHTTPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISK 128
Query: 720 FIAAFGDRGDIRSAIHWFHKAKTISRGHCEFSSNAILGVLVKANRVNLAKAIYDQVLSEG 541
I A+GDRG++++AI WFH+AK I G C +S N++LGVLV+ N + LA+ + Q++ E
Sbjct: 129 LIKAYGDRGNVKAAIFWFHQAKQIENGACLYSYNSLLGVLVRVNSIKLAEEFFHQIVKEN 188
Query: 540 ILKPDVFTYTTMIRGFCKMGMVESALQVFDEMRCEPNTVTYNTLIHGFCKKGDVEGAKRV 361
++ PDV TYTTMIRG+CKMGM+E+A +VFD M +PN + YNT+I+GFCKKGD+E A+ V
Sbjct: 189 VVPPDVSTYTTMIRGYCKMGMIENAKKVFDVMTVKPNLLAYNTMINGFCKKGDMESARLV 248
Query: 360 YNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLS 181
++R++ + C P+ VT+TTLIDGY +KGE +EA CM EM+ +GC PN +TYNA++ GL
Sbjct: 249 FDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLC 308
Query: 180 LSGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPDVK 1
++G VDEAK +M +MRLNG KDNV+T+ S+LKG C+VG+ D A+ +L+ ++ MNPDVK
Sbjct: 309 INGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVK 368
>ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|222854510|gb|EEE92057.1|
predicted protein [Populus trichocarpa]
Length = 567
Score = 375 bits (962), Expect = e-101
Identities = 174/300 (58%), Positives = 230/300 (76%)
Frame = -2
Query: 900 HHALYFFNWASNPIPNPNNYSHPRSCYAAITDVLLSHSLFSTAHSLLRRSNKLSDPIISR 721
+ AL+FFNWASN PNPNNYSH CY AI D+LLSHSLF A +LL + SD ++S+
Sbjct: 75 YQALFFFNWASNLNPNPNNYSHNHRCYVAIIDLLLSHSLFPIAKNLLEKHGTFSDLLVSK 134
Query: 720 FIAAFGDRGDIRSAIHWFHKAKTISRGHCEFSSNAILGVLVKANRVNLAKAIYDQVLSEG 541
I A+G GD +SAI WFHK K I +G C FS NAILGVLVK N++N+AK+ +DQ++++
Sbjct: 135 LIRAYGYSGDTKSAIFWFHKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDA 194
Query: 540 ILKPDVFTYTTMIRGFCKMGMVESALQVFDEMRCEPNTVTYNTLIHGFCKKGDVEGAKRV 361
++KPD TYTTMIRGFCK+GM+++A +VFDEM CEPN +T NTLI+G+CKKGD+E A+
Sbjct: 195 VVKPDASTYTTMIRGFCKVGMIDNARKVFDEMICEPNLITCNTLINGYCKKGDMENARIF 254
Query: 360 YNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLS 181
R++E+K C PD VT++TLIDGY +KGE EA M ML +GCNPN+ TYNAI+ GL
Sbjct: 255 LCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLC 314
Query: 180 LSGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPDVK 1
L GNVDEA++++T+MRLNG+K+NVAT+ SILKG + G+S++AI + EM+ +GM D K
Sbjct: 315 LRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAK 374
>ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 472
Score = 317 bits (812), Expect = 2e-84
Identities = 160/297 (53%), Positives = 208/297 (70%)
Frame = -2
Query: 897 HALYFFNWASNPIPNPNNYSHPRSCYAAITDVLLSHSLFSTAHSLLRRSNKLSDPIISRF 718
HAL+FFNWASNP PNPNNYSH CY AITD+LLSHSLFSTA SLLR SN+LSD ++ RF
Sbjct: 72 HALHFFNWASNPNPNPNNYSHTPLCYTAITDLLLSHSLFSTAFSLLRHSNRLSDNLVCRF 131
Query: 717 IAAFGDRGDIRSAIHWFHKAKTISRGHCEFSSNAILGVLVKANRVNLAKAIYDQVLSEGI 538
I A G RGDIR AIHWFH+A T +RG C FS NAILGVLV+ANRVN+AKAIYDQVL+E +
Sbjct: 132 INALGHRGDIRGAIHWFHQANTFTRGRCVFSCNAILGVLVRANRVNIAKAIYDQVLAEAV 191
Query: 537 LKPDVFTYTTMIRGFCKMGMVESALQVFDEMRCEPNTVTYNTLIHGFCKKGDVEGAKRVY 358
L+PDV+TYTTMIRGFCK+G VESA +VFDEMRCEPN VTYNT G+V+ A+++
Sbjct: 192 LEPDVYTYTTMIRGFCKVGKVESARKVFDEMRCEPNIVTYNT--------GEVDEARKMM 243
Query: 357 NRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLSL 178
+R + K DV T T+L+ G+ G+ EA+ ++EM+ +G P+V Y +V
Sbjct: 244 SR-MRLNGLKDDVATNTSLLKGFCIVGKSDEAVKHLREMVSRGMKPDVKAYGVVVNEYCK 302
Query: 177 SGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPD 7
EA ++ M + G+K NV++ ++ + G+ D+ + LK+M G +P+
Sbjct: 303 IRKPSEAVLLLREMVVRGVKPNVSSFNAVFRVLVDEGKIDEGLHLLKQMPKMGCSPN 359
Score = 143 bits (360), Expect = 6e-32
Identities = 73/139 (52%), Positives = 97/139 (69%)
Frame = -2
Query: 417 NTLIHGFCKKGDVEGAKRVYNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEML 238
N ++ + V AK +Y+++L +PDV T+TT+I G+ + G+ + A EM
Sbjct: 164 NAILGVLVRANRVNIAKAIYDQVLAEAVLEPDVYTYTTMIRGFCKVGKVESARKVFDEMR 223
Query: 237 EQGCNPNVVTYNAIVEGLSLSGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSD 58
C PN+VTYN +G VDEA+KMM+RMRLNGLKD+VATNTS+LKGFCIVG+SD
Sbjct: 224 ---CEPNIVTYN--------TGEVDEARKMMSRMRLNGLKDDVATNTSLLKGFCIVGKSD 272
Query: 57 DAIKHLKEMVSRGMNPDVK 1
+A+KHL+EMVSRGM PDVK
Sbjct: 273 EAVKHLREMVSRGMKPDVK 291
>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like
[Vitis vinifera]
Length = 563
Score = 277 bits (709), Expect = 2e-72
Identities = 138/321 (42%), Positives = 203/321 (63%), Gaps = 23/321 (7%)
Frame = -2
Query: 900 HHALYFFNWASNPIPNPNNYSHPRSCYAAITDVLLSHSLFSTAHSLLRRSNKLSDPIISR 721
+HAL+FFNWASNP PNPNNYSH CY AITD+L+SH LFSTA SLL+ ++LSD ++
Sbjct: 128 YHALFFFNWASNPNPNPNNYSHSHLCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAK 187
Query: 720 FIAAFGDRGDIRSAIHWFHKAKTISRGHCEFSSNAILGVLVKANRVNLAKAIYDQVLSEG 541
F+ A+GDRGDIR AIHWFH+AK + G C FS NAILGV VKANR+ LA+A++DQ++ EG
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEG 247
Query: 540 ILKPDVFTYTTMIRGFCKMGMVESALQVFDEMRCEP----------------------NT 427
++KPDV TYTT+IRG+CKMGM+E+A VFDEM C+P N
Sbjct: 248 VVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMGCKPNLGNVDEAKRMMTRMRLNGLKDNV 307
Query: 426 VTYNTLIHGFCKKGDVEGAKRVYNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMK 247
T+ +++ G C G ++ A R ++ + D + +++ Y + G+ +A++ +K
Sbjct: 308 ATHTSILKGLCVVGKLDDAARHLKEMVGL-GMEADAKAYGVVVNEYCKIGKADDAISLLK 366
Query: 246 EMLEQGCNPNVVTYNAIVEGLSLSGNVDEAKKMMTRMRLNGLKDNVATNTSILKGFC-IV 70
EM +G NP+V ++NA+ L SG D+A ++ +M+ G N + ++++ G C
Sbjct: 367 EMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAK 426
Query: 69 GRSDDAIKHLKEMVSRGMNPD 7
GR + + + +M G + D
Sbjct: 427 GRMHEVEEFVDDMCRNGHHLD 447
Score = 133 bits (335), Expect = 5e-29
Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 3/177 (1%)
Frame = -2
Query: 522 FTYTTMIRGFCKMGMVESALQVFD---EMRCEPNTVTYNTLIHGFCKKGDVEGAKRVYNR 352
F ++ + G + A+ F +M +YN ++ F K + A+ V+++
Sbjct: 183 FAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQ 242
Query: 351 LLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCMKEMLEQGCNPNVVTYNAIVEGLSLSG 172
+++ KPDV T+TT+I GY + G + A N EM GC PN+ G
Sbjct: 243 IVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNL-------------G 286
Query: 171 NVDEAKKMMTRMRLNGLKDNVATNTSILKGFCIVGRSDDAIKHLKEMVSRGMNPDVK 1
NVDEAK+MMTRMRLNGLKDNVAT+TSILKG C+VG+ DDA +HLKEMV GM D K
Sbjct: 287 NVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAK 343
Score = 56.6 bits (135), Expect = 8e-06
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 4/158 (2%)
Frame = -2
Query: 597 KANRVNLAKAIYDQVLSEGILKPDVFTYTTMIRGFCKMGMVESALQVFDEMR---CEPNT 427
K + + A ++ ++ S GI P V ++ + R + G + A + +M+ C PN
Sbjct: 354 KIGKADDAISLLKEMKSRGI-NPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNF 412
Query: 426 VTYNTLIHGFCK-KGDVEGAKRVYNRLLETKSCKPDVVTFTTLIDGYSRKGEFQEALNCM 250
++Y+T+I G CK KG + + + + D ++ L+ GY G A+
Sbjct: 413 LSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGH-HLDASMYSWLVKGYCEDGNADMAMRLF 471
Query: 249 KEMLEQGCNPNVVTYNAIVEGLSLSGNVDEAKKMMTRM 136
EML+ G N+ ++ A V+GLS E +K M
Sbjct: 472 CEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEM 509