BLASTX nr result

ID: Glycyrrhiza23_contig00020560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020560
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46266.1| unknown [Medicago truncatula]                           70   2e-10
gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold ...    70   2e-10
ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|...    69   3e-10
ref|XP_003626684.1| hypothetical protein MTR_8g005840 [Medicago ...    65   6e-09
ref|XP_003613621.1| WD-repeat protein GhTTG1 [Medicago truncatul...    62   5e-08

>gb|AFK46266.1| unknown [Medicago truncatula]
          Length = 140

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 11/70 (15%)
 Frame = -2

Query: 332 QTRWRNCFSLTSGMQFRVTHIYREGNSCADKLAN-----------WWDLIPQFIWEDFFR 186
           + RW NC  +T  M+F  +HIYREGN CAD LAN           W+D IP F+  ++ R
Sbjct: 68  RNRWENCIHITHRMRFCASHIYREGNICADSLANFGLSLSSLDLFWFDSIPDFVRREYNR 127

Query: 185 NRFDLPSYRF 156
           NR  +P++RF
Sbjct: 128 NRLGMPNFRF 137


>gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 111

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 11/70 (15%)
 Frame = -2

Query: 332 QTRWRNCFSLTSGMQFRVTHIYREGNSCADKLAN-----------WWDLIPQFIWEDFFR 186
           + RW NC  LT  M+F  THIYREGN+CAD LAN           W+D +P F+  +  +
Sbjct: 39  RNRWENCLKLTHRMRFCATHIYREGNTCADSLANFGLTLSSLDLFWFDTVPDFVRGECIK 98

Query: 185 NRFDLPSYRF 156
           NR  +P++R+
Sbjct: 99  NRLGMPNFRY 108


>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
           gi|357503391|ref|XP_003621984.1| Heat shock protein
           [Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
           shock protein [Medicago truncatula]
           gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
           truncatula]
          Length = 553

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/68 (50%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
 Frame = -2

Query: 332 QTRWRNCFSLTSGMQFRVTHIYREGNSCADKLAN---------WWDLIPQFIWEDFFRNR 180
           + RW NC  L S M   +THIYREGN CADKLA          WW+  P  I ED  +NR
Sbjct: 387 KNRWLNCVHLMSNMNCMITHIYREGNHCADKLARLGLALDGFLWWNSPPVDIREDLIKNR 446

Query: 179 FDLPSYRF 156
             LP YRF
Sbjct: 447 LGLPFYRF 454


>ref|XP_003626684.1| hypothetical protein MTR_8g005840 [Medicago truncatula]
           gi|355520706|gb|AET01160.1| hypothetical protein
           MTR_8g005840 [Medicago truncatula]
          Length = 239

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/71 (45%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
 Frame = -2

Query: 332 QTRWRNCFSLTSGMQFRVTHIYREGNSCADKLAN---------WWDLIPQFIWEDFFRNR 180
           + RW NC  L +G+   +TH+Y EGN CADKLAN         WW   P  I  D   NR
Sbjct: 144 KNRWLNCLHLMTGLTCMITHMYSEGNHCADKLANIGLTVDGFTWWSSPPVNIRADLVNNR 203

Query: 179 FDLPSYRFK*F 147
             LP YRF  F
Sbjct: 204 LGLPYYRFSKF 214


>ref|XP_003613621.1| WD-repeat protein GhTTG1 [Medicago truncatula]
           gi|355514956|gb|AES96579.1| WD-repeat protein GhTTG1
           [Medicago truncatula]
          Length = 203

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
 Frame = -2

Query: 332 QTRWRNCFSLTSGMQFRVTHIYREGNSCADKLANWWDLIPQFIW---------EDFFRNR 180
           + +W NC    S M F V+HIYRE NSCAD +AN    +  F+W          D+ RNR
Sbjct: 128 RNKWLNCLQQVSNMNFLVSHIYREENSCADSMANLGLALSVFVWFPSLSDCIRHDYGRNR 187

Query: 179 FDLPSYRF 156
             +PS+RF
Sbjct: 188 LGIPSFRF 195


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