BLASTX nr result

ID: Glycyrrhiza23_contig00020523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020523
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791...   111   5e-23
ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800...   106   2e-21
ref|XP_003607305.1| Chromodomain helicase DNA binding protein [M...   101   5e-20
ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus c...    77   1e-12
ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260...    69   5e-10

>ref|XP_003540620.1| PREDICTED: uncharacterized protein LOC100791832 [Glycine max]
          Length = 1702

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/111 (53%), Positives = 59/111 (53%)
 Frame = +3

Query: 3    GLLLGPWLNLHQTNLWHKDLLKTXXXXXXXXXXXXXXXXXXXXXXXADWLKHVDSVVTMG 182
            GLLLGPWLNLHQTNLWHKDLLKT                       ADWLKHVDSV TMG
Sbjct: 1074 GLLLGPWLNLHQTNLWHKDLLKTSDFFPVKRLLLLLESNLCLLALSADWLKHVDSVATMG 1133

Query: 183  SAXXXXXXXXXXXXXXXXXXKRARYSDIEXXXXXXXXXGLGMYWWRGGRLS 335
            SA                  KRAR SDIE         GLGMYWWRGGRLS
Sbjct: 1134 SATHIVVSSSRTSSRHGIGRKRARNSDIETSSSSNTASGLGMYWWRGGRLS 1184


>ref|XP_003538947.1| PREDICTED: uncharacterized protein LOC100800973 [Glycine max]
          Length = 1735

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/111 (50%), Positives = 58/111 (52%)
 Frame = +3

Query: 3    GLLLGPWLNLHQTNLWHKDLLKTXXXXXXXXXXXXXXXXXXXXXXXADWLKHVDSVVTMG 182
            GLLLGPWLNLHQT+LWHKDLLK                        ADWLKHVDSV TMG
Sbjct: 1104 GLLLGPWLNLHQTDLWHKDLLKASDFLPVKRLLLLLESNLRLLALSADWLKHVDSVATMG 1163

Query: 183  SAXXXXXXXXXXXXXXXXXXKRARYSDIEXXXXXXXXXGLGMYWWRGGRLS 335
            SA                  KRAR +DIE         GLGMYWWRGGRLS
Sbjct: 1164 SATHIVVSSSRTSSRHGIGRKRARNTDIETSSSSNTASGLGMYWWRGGRLS 1214


>ref|XP_003607305.1| Chromodomain helicase DNA binding protein [Medicago truncatula]
            gi|355508360|gb|AES89502.1| Chromodomain helicase DNA
            binding protein [Medicago truncatula]
          Length = 1573

 Score =  101 bits (252), Expect = 5e-20
 Identities = 56/111 (50%), Positives = 58/111 (52%)
 Frame = +3

Query: 3    GLLLGPWLNLHQTNLWHKDLLKTXXXXXXXXXXXXXXXXXXXXXXXADWLKHVDSVVTMG 182
            GLLLGPWLNLHQTNLWH+DLLKT                       ADWLKHVDSV TMG
Sbjct: 1191 GLLLGPWLNLHQTNLWHEDLLKTFDFLSVKRVLLLLESNLRHRALSADWLKHVDSVGTMG 1250

Query: 183  SAXXXXXXXXXXXXXXXXXXKRARYSDIEXXXXXXXXXGLGMYWWRGGRLS 335
            SA                  KRAR+SDIE         GL MYW RGGRLS
Sbjct: 1251 SATHIVVNLSRTSSKHGVGKKRARHSDIESSSSSKTTGGLVMYWSRGGRLS 1301


>ref|XP_002513535.1| hypothetical protein RCOM_1578820 [Ricinus communis]
            gi|223547443|gb|EEF48938.1| hypothetical protein
            RCOM_1578820 [Ricinus communis]
          Length = 1915

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/111 (37%), Positives = 49/111 (44%)
 Frame = +3

Query: 3    GLLLGPWLNLHQTNLWHKDLLKTXXXXXXXXXXXXXXXXXXXXXXXADWLKHVDSVVTMG 182
            GLLLGPWLN + + LW K +LK                        A+WLKHVDS   MG
Sbjct: 1140 GLLLGPWLNPNYSKLWRKSVLKASDIVSLKHLLLTLESNLSRLALSAEWLKHVDSSPRMG 1199

Query: 183  SAXXXXXXXXXXXXXXXXXXKRARYSDIEXXXXXXXXXGLGMYWWRGGRLS 335
            SA                  KRAR+S+ +         GL M WWRGGRLS
Sbjct: 1200 SASHIVMASLRASSKNGISKKRARFSEFDSNPSSNSSSGLSMLWWRGGRLS 1250


>ref|XP_002274937.2| PREDICTED: uncharacterized protein LOC100260139 [Vitis vinifera]
          Length = 1976

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/111 (35%), Positives = 46/111 (41%)
 Frame = +3

Query: 3    GLLLGPWLNLHQTNLWHKDLLKTXXXXXXXXXXXXXXXXXXXXXXXADWLKHVDSVVTMG 182
            GLL+GPW+N H   LW K+ LK                        ADWLK +DS +TMG
Sbjct: 1033 GLLMGPWMNPHHAKLWCKNALKASDVASVKHLLLTLESNLRRLALSADWLKQMDSFITMG 1092

Query: 183  SAXXXXXXXXXXXXXXXXXXKRARYSDIEXXXXXXXXXGLGMYWWRGGRLS 335
            SA                  KR R S            GL ++WWRGGRLS
Sbjct: 1093 SA-SHIVISSRASSKLGVGKKRTRCSGFVSKPSSNAATGLSLFWWRGGRLS 1142


Top