BLASTX nr result

ID: Glycyrrhiza23_contig00020505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020505
         (856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]           220   3e-55
ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein ...   206   4e-51
gb|AFK44512.1| unknown [Medicago truncatula]                          203   4e-50
gb|AFK43918.1| unknown [Lotus japonicus]                              202   1e-49
ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   180   4e-43

>ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
          Length = 145

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/135 (82%), Positives = 119/135 (88%), Gaps = 5/135 (3%)
 Frame = +1

Query: 103 FRRLFCTNTSSPSATFPFVPTPSSGAPPA--RQMAEPSTNLFVSGLSKRTTTERLREEFA 276
           FRR FCTN++SPS  FPFVPTP  GA P   R  AEP+ NLFVSGLSKRTTTERLREEFA
Sbjct: 13  FRRFFCTNSASPS--FPFVPTPPPGATPTPTRPTAEPNPNLFVSGLSKRTTTERLREEFA 70

Query: 277 KFGEVVHARVVTDRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 456
           KFGEVVHARVVTDRVSGYSKGFGFV+YATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP
Sbjct: 71  KFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPP 130

Query: 457 PGQAMTN---QYGQQ 492
           PGQ++ N   QYG+Q
Sbjct: 131 PGQSLNNNSPQYGRQ 145


>ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 145

 Score =  206 bits (525), Expect = 4e-51
 Identities = 107/134 (79%), Positives = 116/134 (86%), Gaps = 5/134 (3%)
 Frame = +1

Query: 106 RRLFCTNTSSPSATFPFVPTPSSGAPPA--RQMAEPSTNLFVSGLSKRTTTERLREEFAK 279
           RR FCTN++S S  FPFV T   GA PA  R  AEP+TNLFVSGLSKRT TERLREEFAK
Sbjct: 14  RRFFCTNSASSS--FPFVSTLPPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAK 71

Query: 280 FGEVVHARVVTDRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPP 459
           FGEVVHARVVTDRVSGYSKGFGFV+YATIE+AAKGIEGMDGKFLDGWVIFAEYARPRPPP
Sbjct: 72  FGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPP 131

Query: 460 GQAM---TNQYGQQ 492
           GQ +   ++QYG+Q
Sbjct: 132 GQPLNSNSSQYGRQ 145


>gb|AFK44512.1| unknown [Medicago truncatula]
          Length = 144

 Score =  203 bits (517), Expect = 4e-50
 Identities = 102/125 (81%), Positives = 109/125 (87%)
 Frame = +1

Query: 103 FRRLFCTNTSSPSATFPFVPTPSSGAPPARQMAEPSTNLFVSGLSKRTTTERLREEFAKF 282
           F RLFCTN   P A+ P  P+ SS  P ARQMAEPSTNLFVSGLSKRTTTE LRE F KF
Sbjct: 18  FCRLFCTN---PIASSPAFPSFSSSPPSARQMAEPSTNLFVSGLSKRTTTETLREAFQKF 74

Query: 283 GEVVHARVVTDRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPG 462
           GEVVHARVVTDRVSGYSKGFGFVKYAT+E+AAKGIEGMDGKFL+GWVIFAEYARPRPPPG
Sbjct: 75  GEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWVIFAEYARPRPPPG 134

Query: 463 QAMTN 477
           +A+ N
Sbjct: 135 EAVNN 139


>gb|AFK43918.1| unknown [Lotus japonicus]
          Length = 141

 Score =  202 bits (513), Expect = 1e-49
 Identities = 102/135 (75%), Positives = 112/135 (82%), Gaps = 4/135 (2%)
 Frame = +1

Query: 100 GFRRLFCTNTSSPSATFPFVPTPSSGAPPARQMAEPSTNLFVSGLSKRTTTERLREEFAK 279
           G RRLFCTN++SPS+ F       +G P  RQM EPSTNLFVSGL+KRTTTE+LREEFAK
Sbjct: 12  GLRRLFCTNSTSPSSPFTL-----TGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAK 66

Query: 280 FGEVVHARVVTDRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPP 459
           FGEVVHARVVTDRVSGYSKGFGFVKYATIEEA+KGI+GMDGKFLDGWVIFAEYA+  P P
Sbjct: 67  FGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYAKSSPAP 126

Query: 460 GQA----MTNQYGQQ 492
           GQ     MTN Y +Q
Sbjct: 127 GQQPANNMTNPYARQ 141


>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 174

 Score =  180 bits (456), Expect = 4e-43
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = +1

Query: 133 SPSATFPFVPTPSSGAPPARQMAEPSTNLFVSGLSKRTTTERLREEFAKFGEVVHARVVT 312
           S ++T  F+P P   +   R++AEPSTNLFVSGLSKRTTTE+L E FAKFGEV HARVVT
Sbjct: 53  SSASTSSFIPPPLPPSAQQREVAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVT 112

Query: 313 DRVSGYSKGFGFVKYATIEEAAKGIEGMDGKFLDGWVIFAEYARPRPPP 459
           DRV+GYSKGFGFVKYAT+E+AAKGIEGMDGKFLDGWVIFAEYARPRPPP
Sbjct: 113 DRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPP 161


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