BLASTX nr result

ID: Glycyrrhiza23_contig00020497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020497
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521229.1| PREDICTED: histone H2AX-like [Glycine max]        189   6e-46
gb|ACU20713.1| unknown [Glycine max]                                  187   2e-45
ref|XP_003554230.1| PREDICTED: histone H2AX-like [Glycine max]        186   4e-45
ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycin...   181   9e-44
ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|3555008...   181   1e-43

>ref|XP_003521229.1| PREDICTED: histone H2AX-like [Glycine max]
          Length = 144

 Score =  189 bits (479), Expect = 6e-46
 Identities = 98/124 (79%), Positives = 103/124 (83%)
 Frame = +2

Query: 125 SKSVSRSTKAGLQFPVGRVARFLKAGRYSQRVGSGSPXXXXXXXXXXXXXXXXXXGNAAR 304
           SKSVSRS+KAGLQFPVGRVAR+LKAGRY+QRVGSGSP                  GNAAR
Sbjct: 21  SKSVSRSSKAGLQFPVGRVARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAAR 80

Query: 305 DNKKSRIIPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGNKGKGEIGSA 484
           DNKK+RI+PRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKV  KGK EIGSA
Sbjct: 81  DNKKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVAGKGKTEIGSA 140

Query: 485 SQEF 496
           SQEF
Sbjct: 141 SQEF 144


>gb|ACU20713.1| unknown [Glycine max]
          Length = 144

 Score =  187 bits (475), Expect = 2e-45
 Identities = 97/124 (78%), Positives = 102/124 (82%)
 Frame = +2

Query: 125 SKSVSRSTKAGLQFPVGRVARFLKAGRYSQRVGSGSPXXXXXXXXXXXXXXXXXXGNAAR 304
           SKSVSRS+KAGLQFPVGR AR+LKAGRY+QRVGSGSP                  GNAAR
Sbjct: 21  SKSVSRSSKAGLQFPVGRAARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAAR 80

Query: 305 DNKKSRIIPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGNKGKGEIGSA 484
           DNKK+RI+PRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKV  KGK EIGSA
Sbjct: 81  DNKKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVAGKGKTEIGSA 140

Query: 485 SQEF 496
           SQEF
Sbjct: 141 SQEF 144


>ref|XP_003554230.1| PREDICTED: histone H2AX-like [Glycine max]
          Length = 144

 Score =  186 bits (472), Expect = 4e-45
 Identities = 96/124 (77%), Positives = 102/124 (82%)
 Frame = +2

Query: 125 SKSVSRSTKAGLQFPVGRVARFLKAGRYSQRVGSGSPXXXXXXXXXXXXXXXXXXGNAAR 304
           +KSVSRS+KAGLQFPVGRVAR+LKAGRY+QRVGSGSP                  GNAAR
Sbjct: 21  TKSVSRSSKAGLQFPVGRVARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAAR 80

Query: 305 DNKKSRIIPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGNKGKGEIGSA 484
           DNKK+RI+PRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKK   KGK EIGSA
Sbjct: 81  DNKKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKAAGKGKPEIGSA 140

Query: 485 SQEF 496
           SQEF
Sbjct: 141 SQEF 144


>ref|NP_001235770.1| uncharacterized protein LOC100305465 [Glycine max]
           gi|255625587|gb|ACU13138.1| unknown [Glycine max]
          Length = 140

 Score =  181 bits (460), Expect = 9e-44
 Identities = 94/124 (75%), Positives = 103/124 (83%)
 Frame = +2

Query: 125 SKSVSRSTKAGLQFPVGRVARFLKAGRYSQRVGSGSPXXXXXXXXXXXXXXXXXXGNAAR 304
           SKSVSRS KAGLQFPVGR+ARFLKAG+Y++RVG+G+P                  GNAAR
Sbjct: 18  SKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAAR 77

Query: 305 DNKKSRIIPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGNKGKGEIGSA 484
           DNKK+RI+PRHIQLAVRNDEELSKL+GSVTIANGGVLPNIHQ LLPKKVG KGKGEIGSA
Sbjct: 78  DNKKNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG-KGKGEIGSA 136

Query: 485 SQEF 496
           SQEF
Sbjct: 137 SQEF 140


>ref|XP_003625881.1| Histone H2A [Medicago truncatula] gi|355500896|gb|AES82099.1|
           Histone H2A [Medicago truncatula]
           gi|388495504|gb|AFK35818.1| unknown [Medicago
           truncatula]
          Length = 142

 Score =  181 bits (459), Expect = 1e-43
 Identities = 93/124 (75%), Positives = 104/124 (83%)
 Frame = +2

Query: 125 SKSVSRSTKAGLQFPVGRVARFLKAGRYSQRVGSGSPXXXXXXXXXXXXXXXXXXGNAAR 304
           SKSVSRS+KAGLQFPVGR+ARFLKAG+Y++RVG+G+P                  GNAAR
Sbjct: 20  SKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAAR 79

Query: 305 DNKKSRIIPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVGNKGKGEIGSA 484
           DNKK+RI+PRHIQLAVRNDEELSKL+G+VTIANGGVLPNIHQ LLPKKVG KGKGEIGSA
Sbjct: 80  DNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQTLLPKKVG-KGKGEIGSA 138

Query: 485 SQEF 496
           SQEF
Sbjct: 139 SQEF 142