BLASTX nr result

ID: Glycyrrhiza23_contig00020492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020492
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago trun...   460   e-127
ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-lik...   455   e-126
ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-lik...   450   e-124
ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   384   e-104
ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis...   381   e-104

>ref|XP_003638789.1| tRNA modification GTPase mnmE [Medicago truncatula]
            gi|355504724|gb|AES85927.1| tRNA modification GTPase mnmE
            [Medicago truncatula]
          Length = 543

 Score =  460 bits (1183), Expect = e-127
 Identities = 233/251 (92%), Positives = 241/251 (96%)
 Frame = -1

Query: 827  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVIEASISINGVPITLLDTAGI 648
            SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTE+AGTTRDVIEASI+ING+PITLLDTAGI
Sbjct: 293  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASININGIPITLLDTAGI 352

Query: 647  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTNLLERIQSAKGSTRSSTPVI 468
            RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDT LLERIQSAK ST SSTPVI
Sbjct: 353  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSAKESTGSSTPVI 412

Query: 467  LVVNKIDCEPCAETEWDNGCHHHKFFSKRVFTCAVTGQGLQDLERAVLEIVGLDGIHAGG 288
            LVVNKIDC+PCAETEWD G H HK FSK+VFTCAVT QGLQDLERAVLEIVG+DGI +GG
Sbjct: 413  LVVNKIDCKPCAETEWDKGMHSHKIFSKQVFTCAVTSQGLQDLERAVLEIVGMDGIASGG 472

Query: 287  RRWTVNQRQCEQLVRTKEALTRLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 108
            RRWTVNQRQCEQLVRTKEAL RLQSSIKEELP+DFWTIDLRDAALSLGQISGEDISEEVL
Sbjct: 473  RRWTVNQRQCEQLVRTKEALVRLQSSIKEELPMDFWTIDLRDAALSLGQISGEDISEEVL 532

Query: 107  SNIFGKFCIGK 75
            SNIFGKFCIGK
Sbjct: 533  SNIFGKFCIGK 543


>ref|XP_003527915.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 548

 Score =  455 bits (1170), Expect = e-126
 Identities = 232/251 (92%), Positives = 240/251 (95%)
 Frame = -1

Query: 827  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVIEASISINGVPITLLDTAGI 648
            SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTE+AGTTRDVIEASIS++G+PITLLDTAGI
Sbjct: 299  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAGI 358

Query: 647  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTNLLERIQSAKGSTRSSTPVI 468
            RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDT LLERIQS KGST SSTPVI
Sbjct: 359  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQSTKGSTGSSTPVI 418

Query: 467  LVVNKIDCEPCAETEWDNGCHHHKFFSKRVFTCAVTGQGLQDLERAVLEIVGLDGIHAGG 288
            LVVNKIDC+PCAET+WD GC  H  FSKRVFTCAVTGQGL DLERAVL+IVGL+GI AGG
Sbjct: 419  LVVNKIDCKPCAETKWDKGCQSH-IFSKRVFTCAVTGQGLHDLERAVLQIVGLEGIPAGG 477

Query: 287  RRWTVNQRQCEQLVRTKEALTRLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 108
            RRWTVNQRQCEQLVRTKEAL RLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL
Sbjct: 478  RRWTVNQRQCEQLVRTKEALARLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 537

Query: 107  SNIFGKFCIGK 75
            SNIFGKFCIGK
Sbjct: 538  SNIFGKFCIGK 548


>ref|XP_003522812.1| PREDICTED: tRNA modification GTPase MnmE-like [Glycine max]
          Length = 520

 Score =  450 bits (1158), Expect = e-124
 Identities = 229/251 (91%), Positives = 239/251 (95%)
 Frame = -1

Query: 827  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVIEASISINGVPITLLDTAGI 648
            SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTE+AGTTRDVIEASIS++G+PITLLDTAGI
Sbjct: 271  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAGI 330

Query: 647  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTNLLERIQSAKGSTRSSTPVI 468
            RDTDDIVEKIGVERSEAVARGADLIIMT+SAVEGWTSEDT LLERIQS KGST SSTPVI
Sbjct: 331  RDTDDIVEKIGVERSEAVARGADLIIMTMSAVEGWTSEDTKLLERIQSTKGSTGSSTPVI 390

Query: 467  LVVNKIDCEPCAETEWDNGCHHHKFFSKRVFTCAVTGQGLQDLERAVLEIVGLDGIHAGG 288
            LVVNKIDC+PCAETEWD GC +H  FSK VFTCAVTGQGL DLE AVL+IVGL+GI AGG
Sbjct: 391  LVVNKIDCKPCAETEWDKGCQNH-IFSKHVFTCAVTGQGLHDLEGAVLQIVGLEGIPAGG 449

Query: 287  RRWTVNQRQCEQLVRTKEALTRLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 108
            RRWTVNQRQCEQLVRTKEAL RLQSSIK+ELPLDFWTIDLRDAALSLGQISGEDISEEVL
Sbjct: 450  RRWTVNQRQCEQLVRTKEALVRLQSSIKDELPLDFWTIDLRDAALSLGQISGEDISEEVL 509

Query: 107  SNIFGKFCIGK 75
            SNIFGKFCIGK
Sbjct: 510  SNIFGKFCIGK 520


>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
            gi|302141924|emb|CBI19127.3| unnamed protein product
            [Vitis vinifera]
          Length = 571

 Score =  384 bits (985), Expect = e-104
 Identities = 197/251 (78%), Positives = 220/251 (87%)
 Frame = -1

Query: 827  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVIEASISINGVPITLLDTAGI 648
            SGLQIAI+GRPNVGKSSLLNAWSKSERAIVTE+AGTTRDV+EAS+SI+G+P+TLLDTAGI
Sbjct: 324  SGLQIAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEASVSIHGIPVTLLDTAGI 383

Query: 647  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTNLLERIQSAKGSTRSSTPVI 468
            R+TDDIVEKIGVERSEAVA  AD+IIMT+SA++GWTS+DT L  RI S K    SSTPVI
Sbjct: 384  RETDDIVEKIGVERSEAVAISADVIIMTISALDGWTSQDTKLFNRIISNKKFVESSTPVI 443

Query: 467  LVVNKIDCEPCAETEWDNGCHHHKFFSKRVFTCAVTGQGLQDLERAVLEIVGLDGIHAGG 288
            LVVNKIDC P A TE          FSK +FTCAVTGQG+ DLE A++EIVGL+ I AGG
Sbjct: 444  LVVNKIDCAPSACTEL---FMEGNSFSKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGG 500

Query: 287  RRWTVNQRQCEQLVRTKEALTRLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 108
            RRWTVNQRQCEQLVRTKEAL RL SSI+EE+PLDFWTIDLR+AAL+LGQISGEDISEEVL
Sbjct: 501  RRWTVNQRQCEQLVRTKEALARLISSIEEEMPLDFWTIDLREAALALGQISGEDISEEVL 560

Query: 107  SNIFGKFCIGK 75
            +NIFGKFCIGK
Sbjct: 561  TNIFGKFCIGK 571


>ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis]
            gi|223546964|gb|EEF48461.1| gtpase mss1/trme, putative
            [Ricinus communis]
          Length = 557

 Score =  381 bits (979), Expect = e-104
 Identities = 190/251 (75%), Positives = 219/251 (87%)
 Frame = -1

Query: 827  SGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVIEASISINGVPITLLDTAGI 648
            SGLQIA+VGRPNVGKSSLLNAWSKSERAIVTE+AGTTRDV+EA +++ G+P+TLLDTAGI
Sbjct: 309  SGLQIALVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEAGVTVGGIPVTLLDTAGI 368

Query: 647  RDTDDIVEKIGVERSEAVARGADLIIMTVSAVEGWTSEDTNLLERIQSAKGSTRSSTPVI 468
            R+TDDIVEKIGVERSEAVA GAD+II+T+SA +GWTSED+ LL RI+S K S  SSTPV+
Sbjct: 369  RETDDIVEKIGVERSEAVAMGADVIILTISAFDGWTSEDSELLSRIESNKKSVGSSTPVV 428

Query: 467  LVVNKIDCEPCAETEWDNGCHHHKFFSKRVFTCAVTGQGLQDLERAVLEIVGLDGIHAGG 288
            L +NKID  P    EW     + K FSK VFTCAVTGQG+++LE A+ EIVGL+ I  GG
Sbjct: 429  LAINKIDTAPSLSMEWIG--RYSKAFSKHVFTCAVTGQGIKELEMAISEIVGLNRIPTGG 486

Query: 287  RRWTVNQRQCEQLVRTKEALTRLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVL 108
            R+WTVNQRQCEQL+RTKEAL RL+SSIK+E+PLDFWTIDLRDAAL+LGQISGE ISEEVL
Sbjct: 487  RKWTVNQRQCEQLMRTKEALARLKSSIKDEMPLDFWTIDLRDAALALGQISGEGISEEVL 546

Query: 107  SNIFGKFCIGK 75
            SNIFGKFCIGK
Sbjct: 547  SNIFGKFCIGK 557


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