BLASTX nr result

ID: Glycyrrhiza23_contig00020454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020454
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   252   3e-65
ref|XP_003598666.1| Integrator complex subunit [Medicago truncat...   223   1e-56
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   214   8e-54
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   211   4e-53
emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]   210   1e-52

>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  252 bits (643), Expect = 3e-65
 Identities = 121/141 (85%), Positives = 129/141 (91%)
 Frame = +2

Query: 2   LLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFSAKIYVTEASARLGQ 181
           LLFAEPWYKTV NLHLWNAS IDV+LISSPMGIMGLPFLTR KGFSAKIYVTEASAR+GQ
Sbjct: 173 LLFAEPWYKTVNNLHLWNASFIDVVLISSPMGIMGLPFLTRTKGFSAKIYVTEASARIGQ 232

Query: 182 LMMEDLVSMHVEFRQFYGLEESNFPPWMRQEELEILPSVLREIISGKDGVKLGGWMPLYS 361
           LMMEDLVSMH EFRQFYG  ESNFP W+R EELE+LPS LRE+I GKDGV+LGGWMPLYS
Sbjct: 233 LMMEDLVSMHAEFRQFYGPGESNFPSWLRHEELEVLPSELRELILGKDGVELGGWMPLYS 292

Query: 362 AADVKDCMLKINTLNYAEEAC 424
           AADVKD MLKI+T+NYAEE C
Sbjct: 293 AADVKDFMLKIHTVNYAEEVC 313


>ref|XP_003598666.1| Integrator complex subunit [Medicago truncatula]
           gi|355487714|gb|AES68917.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 268

 Score =  223 bits (569), Expect = 1e-56
 Identities = 106/119 (89%), Positives = 113/119 (94%)
 Frame = +2

Query: 2   LLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFSAKIYVTEASARLGQ 181
           L+FAEPWYKTV  LHLWNASLIDVILISSPMGIMGLP+LTR KGFSAKIYVTEASAR+GQ
Sbjct: 149 LVFAEPWYKTVNKLHLWNASLIDVILISSPMGIMGLPYLTRQKGFSAKIYVTEASARIGQ 208

Query: 182 LMMEDLVSMHVEFRQFYGLEESNFPPWMRQEELEILPSVLREIISGKDGVKLGGWMPLY 358
           LMMEDLVSMH EFRQFYG EESNFPPW+RQEELEILPSVL+EI+ GKDGV+LGGWMPLY
Sbjct: 209 LMMEDLVSMHAEFRQFYGPEESNFPPWLRQEELEILPSVLKEILVGKDGVELGGWMPLY 267


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score =  214 bits (544), Expect = 8e-54
 Identities = 102/141 (72%), Positives = 118/141 (83%)
 Frame = +2

Query: 2   LLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFSAKIYVTEASARLGQ 181
           L++AEPWYKT  NLHLW+ S ID++LISS MG++GLPFLT+ KGFSAKIY TEA+AR+GQ
Sbjct: 86  LIYAEPWYKTAKNLHLWDPSSIDIVLISSTMGMLGLPFLTQCKGFSAKIYATEATARVGQ 145

Query: 182 LMMEDLVSMHVEFRQFYGLEESNFPPWMRQEELEILPSVLREIISGKDGVKLGGWMPLYS 361
           L+MEDLVSMHVEFRQFYG EES+ P WMR EELE+LPS LRE+  GKDG +LG W PLYS
Sbjct: 146 LIMEDLVSMHVEFRQFYGSEESD-PQWMRWEELELLPSELREVTLGKDGSELGAWFPLYS 204

Query: 362 AADVKDCMLKINTLNYAEEAC 424
           + DVKDCM KI  L YAE AC
Sbjct: 205 SVDVKDCMQKIEMLKYAEAAC 225


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  211 bits (538), Expect = 4e-53
 Identities = 97/141 (68%), Positives = 118/141 (83%)
 Frame = +2

Query: 2   LLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFSAKIYVTEASARLGQ 181
           L+ A+PW+KTVT+LHLWN   IDV+LISSPMG++GLPFL+R+ GF AKIYVTE +AR+GQ
Sbjct: 157 LIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVNGFRAKIYVTEVTARIGQ 216

Query: 182 LMMEDLVSMHVEFRQFYGLEESNFPPWMRQEELEILPSVLREIISGKDGVKLGGWMPLYS 361
           L+MEDLV M+ EFRQFYG EES  P WM  E+LE LPS+ REI+ G+DGV+LGGWMPLYS
Sbjct: 217 LLMEDLVLMNKEFRQFYGCEESGLPQWMNWEKLESLPSLFREIVLGEDGVELGGWMPLYS 276

Query: 362 AADVKDCMLKINTLNYAEEAC 424
           A DVK CM K++TL YA+E C
Sbjct: 277 ADDVKGCMQKVHTLKYAQEVC 297


>emb|CAN78953.1| hypothetical protein VITISV_004722 [Vitis vinifera]
          Length = 665

 Score =  210 bits (534), Expect = 1e-52
 Identities = 96/141 (68%), Positives = 118/141 (83%)
 Frame = +2

Query: 2   LLFAEPWYKTVTNLHLWNASLIDVILISSPMGIMGLPFLTRMKGFSAKIYVTEASARLGQ 181
           L+ A+PW+KTVT+LHLWN   IDV+LISSPMG++GLPFL+R+ GF AKIYVTE +AR+GQ
Sbjct: 98  LIRAQPWFKTVTSLHLWNVPFIDVVLISSPMGMLGLPFLSRVNGFRAKIYVTEVTARIGQ 157

Query: 182 LMMEDLVSMHVEFRQFYGLEESNFPPWMRQEELEILPSVLREIISGKDGVKLGGWMPLYS 361
           L+MEDLV M+ EFRQFYG EES  P WM  E+LE LPS+ REI+ G+DGV+LGGWMPLYS
Sbjct: 158 LLMEDLVLMNKEFRQFYGCEESGLPQWMNWEKLESLPSLFREIVLGEDGVELGGWMPLYS 217

Query: 362 AADVKDCMLKINTLNYAEEAC 424
           A DVK C+ K++TL YA+E C
Sbjct: 218 ADDVKGCIQKVHTLKYAQEVC 238


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