BLASTX nr result

ID: Glycyrrhiza23_contig00020441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020441
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like ...    92   4e-17
ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...    88   6e-16
ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...    84   9e-15
ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like ...    80   1e-13
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 340

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
 Frame = +2

Query: 2   IRRSFSMDSSMHRQFYVAVQQALHQQ--HGHVHEASSIEVYGDSSGRANKRSFFSFGHGS 175
           ++RSFSMDSS+ R+FY AVQ+ALHQQ  +G+V E S+IE  G+S     KRSFFSFGHGS
Sbjct: 270 MKRSFSMDSSVDRKFYGAVQEALHQQQQNGNVFEVSTIEASGESD--RVKRSFFSFGHGS 327

Query: 176 RTRSAVLPVYLDP 214
           ++RSAVLPVYLDP
Sbjct: 328 KSRSAVLPVYLDP 340


>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/71 (67%), Positives = 55/71 (77%)
 Frame = +2

Query: 2   IRRSFSMDSSMHRQFYVAVQQALHQQHGHVHEASSIEVYGDSSGRANKRSFFSFGHGSRT 181
           IRRSFSMDSS  RQFY+AVQ+AL  Q+  V+E +SIE    S  RA KRSFFSFGHGSR+
Sbjct: 295 IRRSFSMDSSGDRQFYLAVQEALRHQNRQVNEVNSIEGCSGSGSRA-KRSFFSFGHGSRS 353

Query: 182 RSAVLPVYLDP 214
           RS+V PV LDP
Sbjct: 354 RSSVQPVSLDP 364


>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/71 (64%), Positives = 54/71 (76%)
 Frame = +2

Query: 2   IRRSFSMDSSMHRQFYVAVQQALHQQHGHVHEASSIEVYGDSSGRANKRSFFSFGHGSRT 181
           IRRSFSMDSS  R+FY+AVQ+AL  Q+  V+E +SIE       RA KRSFFSFGHGSR+
Sbjct: 298 IRRSFSMDSSGDRRFYLAVQEALRNQNWQVNEVNSIEGCSGIGSRA-KRSFFSFGHGSRS 356

Query: 182 RSAVLPVYLDP 214
           RS+V PV LDP
Sbjct: 357 RSSVQPVSLDP 367


>ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 352

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/69 (68%), Positives = 55/69 (79%), Gaps = 3/69 (4%)
 Frame = +2

Query: 2   IRRSFSMDSSMHRQFYVAVQQALHQ---QHGHVHEASSIEVYGDSSGRANKRSFFSFGHG 172
           +RRSFSMDSS+ R+FY AVQ+AL Q   Q+G+V E S+IE   D SGR  KRSFFSFGHG
Sbjct: 279 MRRSFSMDSSVDRKFYEAVQEALQQPQQQNGNVLEVSTIEAC-DGSGRV-KRSFFSFGHG 336

Query: 173 SRTRSAVLP 199
           SR+RSAVLP
Sbjct: 337 SRSRSAVLP 345


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 41/70 (58%), Positives = 52/70 (74%)
 Frame = +2

Query: 2   IRRSFSMDSSMHRQFYVAVQQALHQQHGHVHEASSIEVYGDSSGRANKRSFFSFGHGSRT 181
           IRRSFSMDSS  RQ Y+++Q+ + QQ   V E SS+E     SGRA +R+FFSFGHG  +
Sbjct: 275 IRRSFSMDSSADRQLYLSIQEIV-QQSRQVTEVSSVE---GCSGRA-RRAFFSFGHGRGS 329

Query: 182 RSAVLPVYLD 211
           RS+VLPVYL+
Sbjct: 330 RSSVLPVYLE 339


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