BLASTX nr result

ID: Glycyrrhiza23_contig00020435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020435
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   358   6e-97
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   337   1e-90
emb|CBI28192.3| unnamed protein product [Vitis vinifera]              337   1e-90
gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri]    302   5e-80
ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arab...   302   6e-80

>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  358 bits (920), Expect = 6e-97
 Identities = 188/220 (85%), Positives = 193/220 (87%)
 Frame = +3

Query: 141 MVSPKQXXXXXXXXXXXXXXXXXXQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 320
           MVSPKQ                   RVELLHA+RTS  S  SLLS PPPKPSDRSQVQSK
Sbjct: 1   MVSPKQLLGTIESALLGTSPPMAAHRVELLHALRTSRTSLQSLLSYPPPKPSDRSQVQSK 60

Query: 321 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 500
           SVRLPDSPPISLDDQDV IALKLSDDLHLNEVDCVRLLV+AN+EWGLMGREPLEILRLAA
Sbjct: 61  SVRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANKEWGLMGREPLEILRLAA 120

Query: 501 GLWYTERRYLITSLHLLLRAVVLDQGLEDDILVDIQKYLEDLINSGLRQRLISLIKELNR 680
           GLWYTERR LITSLHLLLRAVVLDQGL+DDILVDIQKYLEDLI+SGLRQRLISLIKELNR
Sbjct: 121 GLWYTERRDLITSLHLLLRAVVLDQGLQDDILVDIQKYLEDLISSGLRQRLISLIKELNR 180

Query: 681 EEPSGLGGPQCERYVLDSRGSLVERQAVVSRERLILGHCL 800
           EEPSGLGGPQCE YVLDSRGSLVERQAVVSRERLILGHCL
Sbjct: 181 EEPSGLGGPQCESYVLDSRGSLVERQAVVSRERLILGHCL 220


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score =  337 bits (865), Expect = 1e-90
 Identities = 173/220 (78%), Positives = 189/220 (85%)
 Frame = +3

Query: 141 MVSPKQXXXXXXXXXXXXXXXXXXQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 320
           MVSPKQ                  Q VEL+HA+R+S+ S  SLLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60

Query: 321 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 500
            VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA 
Sbjct: 61  EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120

Query: 501 GLWYTERRYLITSLHLLLRAVVLDQGLEDDILVDIQKYLEDLINSGLRQRLISLIKELNR 680
           GLWYTERR LIT+L+ LLRAVVLDQGLE D++VDIQKYLEDLIN+GLRQRLISL+KELNR
Sbjct: 121 GLWYTERRDLITALYTLLRAVVLDQGLEADLVVDIQKYLEDLINTGLRQRLISLMKELNR 180

Query: 681 EEPSGLGGPQCERYVLDSRGSLVERQAVVSRERLILGHCL 800
           EEP+GLGGP  ERYVLDSRG+LVER+AVV RERLILGHCL
Sbjct: 181 EEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCL 220


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score =  337 bits (865), Expect = 1e-90
 Identities = 173/220 (78%), Positives = 189/220 (85%)
 Frame = +3

Query: 141 MVSPKQXXXXXXXXXXXXXXXXXXQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 320
           MVSPKQ                  Q VEL+HA+R+S+ S  SLLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKQLLSIIESSLLGPSPPTPAQWVELIHAIRSSLSSLQSLLSFPPPKPSDRAQVQSK 60

Query: 321 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 500
            VRLPDSPPISLDDQDVQIALKLSDDLHLNE+DCVRLLV+ANQEWGLMGREPLEILRLA 
Sbjct: 61  EVRLPDSPPISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWGLMGREPLEILRLAE 120

Query: 501 GLWYTERRYLITSLHLLLRAVVLDQGLEDDILVDIQKYLEDLINSGLRQRLISLIKELNR 680
           GLWYTERR LIT+L+ LLRAVVLDQGLE D++VDIQKYLEDLIN+GLRQRLISL+KELNR
Sbjct: 121 GLWYTERRDLITALYTLLRAVVLDQGLEADLVVDIQKYLEDLINTGLRQRLISLMKELNR 180

Query: 681 EEPSGLGGPQCERYVLDSRGSLVERQAVVSRERLILGHCL 800
           EEP+GLGGP  ERYVLDSRG+LVER+AVV RERLILGHCL
Sbjct: 181 EEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCL 220


>gb|AFJ66182.1| hypothetical protein 11M19.28 [Arabidopsis halleri]
          Length = 1729

 Score =  302 bits (774), Expect = 5e-80
 Identities = 152/220 (69%), Positives = 178/220 (80%)
 Frame = +3

Query: 141 MVSPKQXXXXXXXXXXXXXXXXXXQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 320
           MVSPK+                  QR+EL HA+R S  S  +LLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKELVAIVHSSLLGTSRPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60

Query: 321 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 500
            +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA 
Sbjct: 61  EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120

Query: 501 GLWYTERRYLITSLHLLLRAVVLDQGLEDDILVDIQKYLEDLINSGLRQRLISLIKELNR 680
           GLWYT RR L ++L+ LLRAVVLDQGLE D++ DIQ  LE+LI +GLRQRLI+LIKELNR
Sbjct: 121 GLWYTGRRDLTSTLYTLLRAVVLDQGLEPDLIADIQGLLEELIKAGLRQRLITLIKELNR 180

Query: 681 EEPSGLGGPQCERYVLDSRGSLVERQAVVSRERLILGHCL 800
           ++P+GLGGP CERY++DSRG+LVER+AVV RERLILGHCL
Sbjct: 181 QDPTGLGGPLCERYLIDSRGALVERRAVVQRERLILGHCL 220


>ref|XP_002864101.1| hypothetical protein ARALYDRAFT_495190 [Arabidopsis lyrata subsp.
           lyrata] gi|297309936|gb|EFH40360.1| hypothetical protein
           ARALYDRAFT_495190 [Arabidopsis lyrata subsp. lyrata]
          Length = 1808

 Score =  302 bits (773), Expect = 6e-80
 Identities = 151/220 (68%), Positives = 178/220 (80%)
 Frame = +3

Query: 141 MVSPKQXXXXXXXXXXXXXXXXXXQRVELLHAVRTSIHSFHSLLSCPPPKPSDRSQVQSK 320
           MVSPK+                  QR+EL HA+R S  S  +LLS PPPKPSDR+QVQSK
Sbjct: 1   MVSPKELVAIVHSSLLGTSLPTPTQRIELTHAIRNSFSSIQNLLSFPPPKPSDRAQVQSK 60

Query: 321 SVRLPDSPPISLDDQDVQIALKLSDDLHLNEVDCVRLLVAANQEWGLMGREPLEILRLAA 500
            +RLPDS PISLDDQDV I+LKLSD+LHLNE+D VRLLV+ANQEWGLMGR+PLEI RLA 
Sbjct: 61  EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLMGRDPLEIQRLAT 120

Query: 501 GLWYTERRYLITSLHLLLRAVVLDQGLEDDILVDIQKYLEDLINSGLRQRLISLIKELNR 680
           GLWYT RR L ++L+ LLRAVVLDQGLE D++ DIQ  LE+LI +GLRQRLI+L+KELNR
Sbjct: 121 GLWYTGRRDLTSTLYTLLRAVVLDQGLEPDLIADIQGLLEELIKAGLRQRLITLVKELNR 180

Query: 681 EEPSGLGGPQCERYVLDSRGSLVERQAVVSRERLILGHCL 800
           ++P+GLGGP CERY++DSRG+LVER+AVV RERLILGHCL
Sbjct: 181 QDPTGLGGPLCERYLIDSRGALVERRAVVQRERLILGHCL 220


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