BLASTX nr result

ID: Glycyrrhiza23_contig00020426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020426
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793...   122   3e-26
ref|XP_003619547.1| Peptide chain release factor [Medicago trunc...   121   5e-26
ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-li...   113   2e-23
ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [S...   113   2e-23

>ref|XP_003548256.1| PREDICTED: uncharacterized protein LOC100793467 [Glycine max]
          Length = 250

 Score =  122 bits (306), Expect = 3e-26
 Identities = 78/147 (53%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
 Frame = +2

Query: 23  MAHRILCSKPTLFLTLRLKGSSSYTSKXXXXXXXXXXXXXXVPPSSFLNNTHPISLHSXX 202
           MAH+ L  KP+L LTLRL       +K               PP  FLN T PISL    
Sbjct: 1   MAHKTLF-KPSLILTLRL-------NKTAISFSHHHPFRHSQPPFPFLN-TSPISLPPTT 51

Query: 203 XXXXXXXXXXXXXXXXXI--DGCGGGYLEQTDEELMRQCEMGTFKSSGPGGQHRNKRESS 376
                               +G    YL  +DEELMRQCEM TFK+SGPGGQHRNKRES+
Sbjct: 52  RITNYTHLWCSNYTTVSTIEEGSEKCYLNLSDEELMRQCEMDTFKASGPGGQHRNKRESA 111

Query: 377 VRLKHIPTGIIAQASEDRSQHKNRASA 457
           VRLKH+PTGIIAQASEDRSQHKNRASA
Sbjct: 112 VRLKHLPTGIIAQASEDRSQHKNRASA 138


>ref|XP_003619547.1| Peptide chain release factor [Medicago truncatula]
           gi|355494562|gb|AES75765.1| Peptide chain release factor
           [Medicago truncatula]
          Length = 329

 Score =  121 bits (304), Expect = 5e-26
 Identities = 72/145 (49%), Positives = 86/145 (59%)
 Frame = +2

Query: 23  MAHRILCSKPTLFLTLRLKGSSSYTSKXXXXXXXXXXXXXXVPPSSFLNNTHPISLHSXX 202
           MAH+I+  KPT  L L+ + +++ TS+                   F     PISLHS  
Sbjct: 1   MAHKIIF-KPTFILNLKQQFTTTTTSQTHNISHCHFLHHPF-----FNIKIRPISLHSTT 54

Query: 203 XXXXXXXXXXXXXXXXXIDGCGGGYLEQTDEELMRQCEMGTFKSSGPGGQHRNKRESSVR 382
                                 GGYL+ TD++LMRQCEMGTFK+SGPGGQHRNKRES+VR
Sbjct: 55  PITTTAAATANH----------GGYLDLTDDDLMRQCEMGTFKTSGPGGQHRNKRESAVR 104

Query: 383 LKHIPTGIIAQASEDRSQHKNRASA 457
           LKH+PTGIIAQA EDRSQH NRASA
Sbjct: 105 LKHLPTGIIAQAGEDRSQHMNRASA 129


>ref|XP_002329188.1| predicted protein [Populus trichocarpa] gi|222870969|gb|EEF08100.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = +2

Query: 260 GCGGGYLEQTDEELMRQCEMGTFKSSGPGGQHRNKRESSVRLKHIPTGIIAQASEDRSQH 439
           G G  YLE TD+ELMRQCEM TFK+SGPGGQHRNKRES+VRLKH+PTGIIAQA EDRSQH
Sbjct: 85  GNGTNYLELTDDELMRQCEMDTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQH 144

Query: 440 KNRASA 457
            NRASA
Sbjct: 145 MNRASA 150


>ref|XP_004141513.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
           gi|449526225|ref|XP_004170114.1| PREDICTED: peptide
           chain release factor 1-like [Cucumis sativus]
          Length = 240

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/64 (84%), Positives = 59/64 (92%)
 Frame = +2

Query: 266 GGGYLEQTDEELMRQCEMGTFKSSGPGGQHRNKRESSVRLKHIPTGIIAQASEDRSQHKN 445
           G  YL  +DEELM+QCEMGTFK+SGPGGQHRNKRES+VRLKHIPTGIIAQA EDRSQHKN
Sbjct: 65  GKQYLVLSDEELMKQCEMGTFKASGPGGQHRNKRESAVRLKHIPTGIIAQAVEDRSQHKN 124

Query: 446 RASA 457
           R+SA
Sbjct: 125 RSSA 128


>ref|XP_002458885.1| hypothetical protein SORBIDRAFT_03g042170 [Sorghum bicolor]
           gi|241930860|gb|EES04005.1| hypothetical protein
           SORBIDRAFT_03g042170 [Sorghum bicolor]
          Length = 259

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/67 (82%), Positives = 60/67 (89%), Gaps = 3/67 (4%)
 Frame = +2

Query: 266 GGG---YLEQTDEELMRQCEMGTFKSSGPGGQHRNKRESSVRLKHIPTGIIAQASEDRSQ 436
           GGG   YL  +DEELM QC+MGTFK+SGPGGQHRNKRES+VRLKH+PTGIIAQA EDRSQ
Sbjct: 81  GGGHVDYLGMSDEELMEQCDMGTFKASGPGGQHRNKRESAVRLKHLPTGIIAQAVEDRSQ 140

Query: 437 HKNRASA 457
           HKNRASA
Sbjct: 141 HKNRASA 147


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