BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020421
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containi...   329   6e-88
ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containi...   322   1e-85
ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi...   319   8e-85
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...   315   1e-83
ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi...   288   1e-75

>ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 706

 Score =  329 bits (844), Expect = 6e-88
 Identities = 179/298 (60%), Positives = 211/298 (70%), Gaps = 6/298 (2%)
 Frame = +3

Query: 180  DLKHMTTPISS--SYSLINLKLPNFRPSHKLFPLNPQSKTFLQQPTFSSSQDTIPQVTQS 353
            D++    P SS  SYS  + KLPNF  SH       Q KT LQ                 
Sbjct: 40   DIRMSKEPPSSVPSYSSRHFKLPNFSSSH-------QPKTLLQD---------------- 76

Query: 354  SNSLEDATELDDPDAKSSPLSKTHIWVNPKSPRAKQLWKNSHDA----VSFLAKSLNSCH 521
                    +LDDP+AKSSPLSKT IWVNPKSPRAK LWKNS+ A    ++ LAKSL+SC+
Sbjct: 77   -------AKLDDPNAKSSPLSKTSIWVNPKSPRAKHLWKNSYHARSSSLTKLAKSLDSCN 129

Query: 522  PSEQHVSEILKGNLGDNVTEHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVIL 701
            P+++HVSEILK  LGD+V E DA  IL+++VNP TA+LA++YF QK++  RH++LYNV L
Sbjct: 130  PTQEHVSEILK-VLGDSVLEPDAVFILNSMVNPYTALLAVEYFKQKVKSVRHVILYNVTL 188

Query: 702  KLFRENKDFERAEKLFDEMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCE 881
            KLFR+ KDFE AEKLFDEM  RGV P+++TFST+I CA+VCSLPHKAV+ FEMMPSFGCE
Sbjct: 189  KLFRKVKDFEGAEKLFDEMLHRGVNPNLITFSTMISCASVCSLPHKAVKWFEMMPSFGCE 248

Query: 882  PDETVSSSMIYVYARTGNADMALSLYDRAKKEKWHVRTVAFSTLIKMYGMLGNYDGCL 1055
            PD  V SSMIY Y RTGN DMAL LYDRAK  KWHV T  FS LIKMYG+ GNY GCL
Sbjct: 249  PDNNVCSSMIYAYTRTGNTDMALRLYDRAKAGKWHVDTAVFSGLIKMYGVSGNYVGCL 306


>ref|XP_003534742.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 646

 Score =  322 bits (825), Expect = 1e-85
 Identities = 163/224 (72%), Positives = 189/224 (84%), Gaps = 4/224 (1%)
 Frame = +3

Query: 396  AKSSPLSKTHIWVNPKSPRAKQLWKNSH----DAVSFLAKSLNSCHPSEQHVSEILKGNL 563
            AKSS LSKT IWVNPKSPRAK LWKNS+     +++ LA+SL+SC+P++QHVSEILK  L
Sbjct: 24   AKSSSLSKTSIWVNPKSPRAKHLWKNSYHTRSSSLTKLARSLDSCNPTQQHVSEILKV-L 82

Query: 564  GDNVTEHDAEHILHNIVNPDTAILALKYFTQKIEPDRHIVLYNVILKLFRENKDFERAEK 743
            GDNV E DA  IL+++VNP TA+LA++YF QKI+  RH++LYNV LKLFRE KDFE AEK
Sbjct: 83   GDNVLEADAVFILNSMVNPYTALLAVEYFKQKIKHARHVILYNVTLKLFREVKDFEGAEK 142

Query: 744  LFDEMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVELFEMMPSFGCEPDETVSSSMIYVYA 923
            LFDEM QRGV P+++TFST+I CA+VCSLPHKAV+ FEMMPSFGCEPD+ V SSMIY YA
Sbjct: 143  LFDEMLQRGVNPNLITFSTMIICASVCSLPHKAVKWFEMMPSFGCEPDDNVCSSMIYSYA 202

Query: 924  RTGNADMALSLYDRAKKEKWHVRTVAFSTLIKMYGMLGNYDGCL 1055
            RTGNADMAL LYDRAK EKWHV TV FS LIKM+GM GNYDGCL
Sbjct: 203  RTGNADMALRLYDRAKAEKWHVDTVVFSGLIKMHGMSGNYDGCL 246


>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 693

 Score =  319 bits (817), Expect = 8e-85
 Identities = 183/314 (58%), Positives = 216/314 (68%), Gaps = 6/314 (1%)
 Frame = +3

Query: 132  MAQAYPLCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFR--PSHKLFPLNPQSKTFLQQ 305
            MAQ YPLCSS S+S           SS Y     ++P F   PSH        SKT L  
Sbjct: 1    MAQPYPLCSSRSAS---------SFSSHY-----RIPFFTIIPSH--------SKTLLHA 38

Query: 306  PTFSSSQDTIPQVTQSSNSLEDATELDDPDAKSSPLSKTHIWVNPKSPRAKQLWKNSHDA 485
            P FS          Q  N+L+DA +LDDPDAKS  LSK   WVNP+SPRAKQL +NS  A
Sbjct: 39   PRFSF---------QPFNTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAKQLQQNSPHA 89

Query: 486  VSF----LAKSLNSCHPSEQHVSEILKGNLGDNVTEHDAEHILHNIVNPDTAILALKYFT 653
             S     LAKSL+SC+P+E+HVSEIL   LG+NV E DA  IL+ + NP+TA+LALKYF 
Sbjct: 90   RSSSLTKLAKSLDSCNPTEEHVSEILNV-LGNNVAERDAVFILNTMANPNTALLALKYFQ 148

Query: 654  QKIEPDRHIVLYNVILKLFRENKDFERAEKLFDEMPQRGVKPSVLTFSTLIRCAAVCSLP 833
            QKI P +H+VLYNV LK+ RE KDFE +EKLFDEM QRGV+P+++TFST+I  A+VCSLP
Sbjct: 149  QKISPGKHVVLYNVTLKVLREVKDFEGSEKLFDEMLQRGVEPNLITFSTIISSASVCSLP 208

Query: 834  HKAVELFEMMPSFGCEPDETVSSSMIYVYARTGNADMALSLYDRAKKEKWHVRTVAFSTL 1013
             KA+E FE MPSFG EPD +V+S MI+ YA +GNADMAL LY RAK EKW V T AFS L
Sbjct: 209  DKAMEWFEKMPSFGVEPDASVASFMIHAYAHSGNADMALKLYGRAKAEKWRVDTAAFSAL 268

Query: 1014 IKMYGMLGNYDGCL 1055
            IKM GML N+DGCL
Sbjct: 269  IKMCGMLENFDGCL 282


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 692

 Score =  315 bits (807), Expect = 1e-83
 Identities = 181/314 (57%), Positives = 211/314 (67%), Gaps = 6/314 (1%)
 Frame = +3

Query: 132  MAQAYPLCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFR--PSHKLFPLNPQSKTFLQQ 305
            MAQ YPLC SPS+S             S+S  + ++P F   PSH        SKT L  
Sbjct: 1    MAQPYPLCPSPSAS-------------SFSF-HSRIPFFTIVPSH--------SKTLLHA 38

Query: 306  PTFSSSQDTIPQVTQSSNSLEDATELDDPDAKSSPLSKTHIWVNPKSPRAKQLWKNSHDA 485
            P FS          Q  N+L+DA +LDDPDAKS  LSK  IWVNP+SPRAK L KNS  A
Sbjct: 39   PRFS---------LQPVNTLQDA-KLDDPDAKSPSLSKNSIWVNPRSPRAKHLQKNSPHA 88

Query: 486  VSF----LAKSLNSCHPSEQHVSEILKGNLGDNVTEHDAEHILHNIVNPDTAILALKYFT 653
             S     LAKSL+SC+P+EQHVSEIL   L DNV+E DA  IL+ +VNP+TA+LALKYF 
Sbjct: 89   RSSSLTKLAKSLDSCNPTEQHVSEILNV-LRDNVSERDAVFILNTMVNPNTALLALKYFQ 147

Query: 654  QKIEPDRHIVLYNVILKLFRENKDFERAEKLFDEMPQRGVKPSVLTFSTLIRCAAVCSLP 833
             KI P +H+VLYNV LK+ RE++DFE AEKLFDEM QRGVKP  +TFSTL+ CA+V  LP
Sbjct: 148  PKINPAKHVVLYNVTLKVLRESRDFEGAEKLFDEMLQRGVKPDNITFSTLVNCASVSGLP 207

Query: 834  HKAVELFEMMPSFGCEPDETVSSSMIYVYARTGNADMALSLYDRAKKEKWHVRTVAFSTL 1013
            +KAVELFE M  FGCEPD    S M+Y YART N D A++LYDRAK E W +  V FSTL
Sbjct: 208  NKAVELFEKMSGFGCEPDGITCSGMVYAYARTNNVDKAVNLYDRAKAENWSLDAVTFSTL 267

Query: 1014 IKMYGMLGNYDGCL 1055
            IKMY M GNYD CL
Sbjct: 268  IKMYSMAGNYDKCL 281


>ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
            chloroplastic-like [Glycine max]
          Length = 705

 Score =  288 bits (738), Expect = 1e-75
 Identities = 165/308 (53%), Positives = 196/308 (63%), Gaps = 6/308 (1%)
 Frame = +3

Query: 150  LCSSPSSSFCDLKHMTTPISSSYSLINLKLPNFRPSHKLFPLNPQSKTFLQQPTFSSSQD 329
            +C+S SS F D  +++T ISSS+SL N K PN   SHK   L+ ++   L Q   S    
Sbjct: 5    ICASHSSLFHDRHYVSTSISSSFSLRNFKFPNAASSHKSLSLHSKASQALHQDAASH--- 61

Query: 330  TIPQVTQSSNSLEDATELDDPDAKSSPLSKTHIWVNPKSPRAKQLWKNSHDA-VSFLAK- 503
                               DPDA S  LSKT IWVNP SPRAK L   S  A  S+LA+ 
Sbjct: 62   -------------------DPDANSLSLSKTRIWVNPNSPRAKHLQPKSPSARYSYLARL 102

Query: 504  --SLNSCHPSEQHVSEILKGNLGDNVTEHDAEHILHNIVNPDTAILALKYFTQKIEP--D 671
              SLNSC PS QHVS ILKG L DNV+E DA  IL  + NP+TA   L +F  KI+P  D
Sbjct: 103  TESLNSCTPSAQHVSTILKG-LRDNVSERDAVFILDKMTNPETAPFVLGHFRDKIKPSTD 161

Query: 672  RHIVLYNVILKLFRENKDFERAEKLFDEMPQRGVKPSVLTFSTLIRCAAVCSLPHKAVEL 851
            + ++LYN  LK FR+++DFE AEKLFDEM QRGVKP  +TFSTLI  A +C+LP KAVE 
Sbjct: 162  KEVILYNATLKAFRKSRDFEGAEKLFDEMLQRGVKPDNITFSTLINSARMCALPDKAVEW 221

Query: 852  FEMMPSFGCEPDETVSSSMIYVYARTGNADMALSLYDRAKKEKWHVRTVAFSTLIKMYGM 1031
            F+ MPSFGCEPD    S+M+  YA+T N DMALSLY RAK EKW +    FSTLIKMYG+
Sbjct: 222  FKKMPSFGCEPDAMTCSAMVSAYAQTNNVDMALSLYGRAKAEKWSLDASTFSTLIKMYGV 281

Query: 1032 LGNYDGCL 1055
            LGNY  CL
Sbjct: 282  LGNYVECL 289