BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020416
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containi...   624   e-176
ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containi...   617   e-174
ref|XP_003593855.1| Pentatricopeptide repeat-containing protein ...   610   e-172
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,...   530   e-148
emb|CBI30945.3| unnamed protein product [Vitis vinifera]              524   e-146

>ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
            chloroplastic-like [Glycine max]
          Length = 793

 Score =  624 bits (1608), Expect = e-176
 Identities = 305/361 (84%), Positives = 324/361 (89%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            LVI+MYS+GCNPDVVTYTAI+DGFCR+G+IDEAKK+LQQMYKHGCKPNTVSYTALLNGLC
Sbjct: 433  LVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLC 492

Query: 183  HNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPV 362
            H+GKSLEAREMINVSEEHWWTPNAITY  VMHGLRREGKLSEACDL REM+EKGFFP PV
Sbjct: 493  HSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPV 552

Query: 363  EXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXM 542
            E            KVVEAKKYLEE L+KGCAINVVNFTTVIHGFCQI            M
Sbjct: 553  EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDM 612

Query: 543  YLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRV 722
            YLS KHPDAVTYTALFDALGKKGRL+EAAELIVKML KGL PTPVTYR+VIHR+ QWGRV
Sbjct: 613  YLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRV 672

Query: 723  DDMMKLLEKMLARQPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLME 902
            DDM+ LLEKML RQPFRTVYNQVIEKLCDFGNLEEAEKL+GKVLRTASK+DANTCHVLME
Sbjct: 673  DDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLME 732

Query: 903  SYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGIQQ 1082
            SYL KG+A+SAYKVAC+MFRRNL PDLKLCEKV+KKLVLDGKLVEADNLMLRFVERGIQQ
Sbjct: 733  SYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGIQQ 792

Query: 1083 K 1085
            K
Sbjct: 793  K 793



 Score =  146 bits (369), Expect = 8e-33
 Identities = 97/362 (26%), Positives = 179/362 (49%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM-YKHGCKPNTVSYTALLNGL 179
            L+  + SKGC PD V+Y  ++   C+  KI+E K ++++M +     P+ V+Y  L++ L
Sbjct: 327  LIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHML 386

Query: 180  CHNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNP 359
              +G + +A   +  +++  +  + + YS ++H   ++G++ EA  LV +M  +G  P+ 
Sbjct: 387  SKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDV 446

Query: 360  VEXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXX 539
            V             ++ EAKK L+++   GC  N V++T +++G C              
Sbjct: 447  VTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCH---SGKSLEAREM 503

Query: 540  MYLSNKH---PDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQ 710
            + +S +H   P+A+TY A+   L ++G+L EA +L  +M+ KG  PTPV    +I   CQ
Sbjct: 504  INVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQ 563

Query: 711  WGRVDDMMKLLEKMLARQPFRTVYN--QVIEKLCDFGNLEEAEKLVGKVLRTASKLDANT 884
              +V +  K LE+ L +     V N   VI   C  G++E A  ++  +  +    DA T
Sbjct: 564  NQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVT 623

Query: 885  CHVLMESYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFV 1064
               L ++   KG    A ++  +M  + L P       V  +    G++ +  NL+ + +
Sbjct: 624  YTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKML 683

Query: 1065 ER 1070
            +R
Sbjct: 684  KR 685



 Score =  120 bits (302), Expect = 5e-25
 Identities = 92/392 (23%), Positives = 166/392 (42%), Gaps = 38/392 (9%)
 Frame = +3

Query: 15   MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGK 194
            M   G  P +      I    + GK+++A K L++M   G KP+ V+Y +L+ G C   +
Sbjct: 261  MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320

Query: 195  SLEAREMIN--------------------------------VSEEHWWT----PNAITYS 266
              +A E+I                                 + E+  W     P+ +TY+
Sbjct: 321  IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380

Query: 267  VVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXXXXXXXXKVVEAKKYLEELLHK 446
             ++H L + G   +A   ++E  +KGF  + V             ++ EAK  + ++  +
Sbjct: 381  TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440

Query: 447  GCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNKHPDAVTYTALFDALGKKGRLEEA 626
            GC  +VV +T ++ GFC++            MY     P+ V+YTAL + L   G+  EA
Sbjct: 441  GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500

Query: 627  AELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLLEKMLARQPFRT--VYNQVIEK 800
             E+I         P  +TY AV+H   + G++ +   L  +M+ +  F T    N +I+ 
Sbjct: 501  REMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 560

Query: 801  LCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTKGIALSAYKVACQMFRRNLIPD 980
            LC    + EA+K + + L     ++      ++  +   G   +A  V   M+     PD
Sbjct: 561  LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPD 620

Query: 981  LKLCEKVTKKLVLDGKLVEADNLMLRFVERGI 1076
                  +   L   G+L EA  L+++ + +G+
Sbjct: 621  AVTYTALFDALGKKGRLDEAAELIVKMLSKGL 652


>ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
            [Glycine max]
          Length = 789

 Score =  617 bits (1592), Expect = e-174
 Identities = 301/361 (83%), Positives = 321/361 (88%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            LVI+MYS+ CNPDVVTYTAI+DGFCR+G+IDEAKKMLQQMYKHGCKPNTVSYTALLNGLC
Sbjct: 429  LVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 488

Query: 183  HNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPV 362
            H+GKSLEAREMINVSEEHWWTPNAITY VVMHG RREGKLSEACDL REM+EKGFFP PV
Sbjct: 489  HSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPV 548

Query: 363  EXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXM 542
            E            KVVEAKKYLEE L+KGCAINVVNFTTVIHGFCQI            M
Sbjct: 549  EINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDM 608

Query: 543  YLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRV 722
            YLSNKHPDAVTYTALFDALGKKGRL+EAAELIVKML KGL PTPVT+R+VIHR+CQWGRV
Sbjct: 609  YLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRV 668

Query: 723  DDMMKLLEKMLARQPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLME 902
            DDM+ LL++M+ R+PFRT+YN VIEKLCDFGNLEEAEKL+GKVLRTASKLDANTCHVLME
Sbjct: 669  DDMLNLLDRMVKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLME 728

Query: 903  SYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGIQQ 1082
            S L KG+ALSAYKVACQMFRRNL PDLKLCEKVTKKLVLDG LVEAD LMLRFVERGIQQ
Sbjct: 729  SCLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQQ 788

Query: 1083 K 1085
            K
Sbjct: 789  K 789



 Score =  143 bits (360), Expect = 9e-32
 Identities = 91/357 (25%), Positives = 169/357 (47%), Gaps = 3/357 (0%)
 Frame = +3

Query: 15   MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGK 194
            M   G  PD+VTY ++I G+C + +I++A +++  +   GC P+ VSY  ++  LC   K
Sbjct: 292  MQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKK 351

Query: 195  SLEAR-EMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXX 371
              + +  M  + ++    P+ +TY+ ++H L + G   +A   ++E  +KGF  + V   
Sbjct: 352  IEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYS 411

Query: 372  XXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLS 551
                      ++ EAK  + ++  + C  +VV +T ++ GFC++            MY  
Sbjct: 412  AIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKH 471

Query: 552  NKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDM 731
               P+ V+YTAL + L   G+  EA E+I         P  +TY  V+H F + G++ + 
Sbjct: 472  GCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEA 531

Query: 732  MKLLEKMLARQPFRT--VYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMES 905
              L  +M+ +  F T    N +I+ LC    + EA+K + + L     ++      ++  
Sbjct: 532  CDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHG 591

Query: 906  YLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGI 1076
            +   G   +A  V   M+  N  PD      +   L   G+L EA  L+++ + +G+
Sbjct: 592  FCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGL 648



 Score =  141 bits (356), Expect = 3e-31
 Identities = 96/362 (26%), Positives = 176/362 (48%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYK-HGCKPNTVSYTALLNGL 179
            L+  + SKGC PD V+Y  ++   C+  KI++ K ++++M +     P+ V+Y  L++ L
Sbjct: 323  LIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHML 382

Query: 180  CHNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNP 359
              +G + +A   +  +E+  +  + + YS ++H   ++G++ EA  LV +M  +   P+ 
Sbjct: 383  SKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDV 442

Query: 360  VEXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXX 539
            V             ++ EAKK L+++   GC  N V++T +++G C              
Sbjct: 443  VTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCH---SGKSLEAREM 499

Query: 540  MYLSNKH---PDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQ 710
            + +S +H   P+A+TY  +     ++G+L EA +L  +M+ KG  PTPV    +I   CQ
Sbjct: 500  INVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQ 559

Query: 711  WGRVDDMMKLLEKMLARQPFRTVYN--QVIEKLCDFGNLEEAEKLVGKVLRTASKLDANT 884
              +V +  K LE+ L +     V N   VI   C  G++E A  ++  +  +    DA T
Sbjct: 560  NQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVT 619

Query: 885  CHVLMESYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFV 1064
               L ++   KG    A ++  +M  + L P       V  +    G++ +  NL+ R V
Sbjct: 620  YTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMV 679

Query: 1065 ER 1070
            +R
Sbjct: 680  KR 681



 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 3/346 (0%)
 Frame = +3

Query: 45   VTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGKSLEAREMINV 224
            + Y  ++D   +      A+++L+ M + G + +  ++  ++      GK   A  ++ +
Sbjct: 197  LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 225  SEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXXXXXXXXK 404
             ++    PN    +  ++ L +  KL +A   +  M   G  P+ V             +
Sbjct: 257  MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 405  VVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYL-SNKHPDAVTYT 581
            + +A + +  L  KGC  + V++ TV+   C+             M   SN  PD VTY 
Sbjct: 317  IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 582  ALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLLEKMLAR 761
             L   L K G  ++A   + +   KG     V Y A++H FCQ GR+D+   L+  M +R
Sbjct: 377  TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 762  --QPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTKGIALSA 935
               P    Y  +++  C  G ++EA+K++ ++ +   K +  +   L+      G +L A
Sbjct: 437  SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 936  YKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERG 1073
             ++          P+      V      +GKL EA +L    VE+G
Sbjct: 497  REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542


>ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355482903|gb|AES64106.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  610 bits (1574), Expect = e-172
 Identities = 300/359 (83%), Positives = 316/359 (88%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            LVI+MYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTV+YT LLNGLC
Sbjct: 430  LVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLC 489

Query: 183  HNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPV 362
            HNGKSLEAREMINVSEEHWWTPNAITYS VMHGLRREGKLSEACDL REMIEKGF PNPV
Sbjct: 490  HNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPV 549

Query: 363  EXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXM 542
            +             VV AKKYLEE LHKGCA+NVVNFT+VI+GFCQI            M
Sbjct: 550  DINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDM 609

Query: 543  YLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRV 722
            YLSNKHPDA+TYT LFDALGKK RL+EA+ELIVKMLGKG+ PTPVTYRAVIHRFCQWGRV
Sbjct: 610  YLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRV 669

Query: 723  DDMMKLLEKMLARQPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLME 902
            DDMMKLLEKM+ARQPF+TVYNQVIEKLC FGN EEAEKL+GKVLRTASKLDA TCH+L+E
Sbjct: 670  DDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIE 729

Query: 903  SYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGIQ 1079
            SYL  G ALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDG   EAD+LMLRFVERGIQ
Sbjct: 730  SYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQ 788



 Score =  143 bits (361), Expect = 7e-32
 Identities = 94/353 (26%), Positives = 167/353 (47%), Gaps = 3/353 (0%)
 Frame = +3

Query: 27   GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGKSLEA 206
            G  PD+V+Y  +I G+C V +ID+A +++ +M   GC P+ VSY  ++  LC + K  E 
Sbjct: 297  GIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEV 356

Query: 207  REMI-NVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXX 383
            + ++ N+ +     P+ +TY+ +++ L + G   +A   +RE  EKGF  + V       
Sbjct: 357  KRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVD 416

Query: 384  XXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNKHP 563
                   + +AK  + ++  KGC  +VV +T +I GFC++            MY     P
Sbjct: 417  SFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKP 476

Query: 564  DAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLL 743
            + VTYT L + L   G+  EA E+I         P  +TY AV+H   + G++ +   L 
Sbjct: 477  NTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLT 536

Query: 744  EKMLAR--QPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTK 917
             +M+ +   P     N +I+ LC   N+  A+K + + L     ++      ++  +   
Sbjct: 537  REMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQI 596

Query: 918  GIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGI 1076
            G   +A  +   M+  N  PD      +   L    +L EA  L+++ + +GI
Sbjct: 597  GDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649



 Score =  131 bits (330), Expect = 3e-28
 Identities = 93/362 (25%), Positives = 169/362 (46%), Gaps = 6/362 (1%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKH-GCKPNTVSYTALLNGL 179
            L+  M  KGC PD V+Y  ++   C+  K++E K++++ M ++    P+ V+Y  L+  L
Sbjct: 324  LIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYAL 383

Query: 180  CHNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNP 359
              +G + +A   +  +EE  +  + + YS V+    +   + +A  LV +M  KG  P+ 
Sbjct: 384  SKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDV 443

Query: 360  VEXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXX 539
            V             K+ EAKK L+++   GC  N V +T +++G C              
Sbjct: 444  VTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCH---NGKSLEAREM 500

Query: 540  MYLSNKH---PDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQ 710
            + +S +H   P+A+TY+A+   L ++G+L EA +L  +M+ KG +P PV    +I   C+
Sbjct: 501  INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCR 560

Query: 711  WGRVDDMMKLLEKMLARQPFRTVYN--QVIEKLCDFGNLEEAEKLVGKVLRTASKLDANT 884
               V    K LE+ L +     V N   VI   C  G+L+ A  ++  +  +    DA T
Sbjct: 561  NQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT 620

Query: 885  CHVLMESYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFV 1064
               L ++   K     A ++  +M  + + P       V  +    G++ +   L+ + +
Sbjct: 621  YTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI 680

Query: 1065 ER 1070
             R
Sbjct: 681  AR 682


>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 737

 Score =  530 bits (1366), Expect = e-148
 Identities = 255/357 (71%), Positives = 300/357 (84%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            +V  M +KGC+PDVVTYTA+++G C+VGK++EAKKMLQQMYKHGCKPNTVSYTALLNGLC
Sbjct: 369  IVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLC 428

Query: 183  HNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPV 362
             +G SLEAREM+N SEE WWTPNAITYSVVMHGLRREGKLSEACD+VREM+ KGFFP PV
Sbjct: 429  QHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPV 488

Query: 363  EXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXM 542
            E            K+ EAKK++EE L++GCA+N VNFTTVIHGFCQ             M
Sbjct: 489  EINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDM 548

Query: 543  YLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRV 722
            YL+NKHPDAVT+TA+ DALGKKGR+EEA    +KML KGL PTPVTYRAVIH++C+ GRV
Sbjct: 549  YLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRV 608

Query: 723  DDMMKLLEKMLARQPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLME 902
            ++++KLL KML+R   RT YNQVIEKLC+FGN E A+K+VG VLRTAS++DANTCH+LME
Sbjct: 609  EELIKLLGKMLSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLME 668

Query: 903  SYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERG 1073
            SYL+KGI LSAYKVAC+MF RNLIPDLKLCEK++KKLVL+GKL EADNLML+FV+RG
Sbjct: 669  SYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRG 725



 Score =  147 bits (372), Expect = 4e-33
 Identities = 89/353 (25%), Positives = 173/353 (49%), Gaps = 3/353 (0%)
 Frame = +3

Query: 27   GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGKSLEA 206
            G  P+VVTY  +I G+C + +++ A +++ +M   GC P+ VSY  ++  LC + +  E 
Sbjct: 236  GITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEV 295

Query: 207  REMIN-VSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXX 383
            R ++  + +++   P+ +TY+ ++H L + G   EA + +RE  E+GF  + V       
Sbjct: 296  RNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVN 355

Query: 384  XXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNKHP 563
                  ++  AK+ + E++ KGC+ +VV +T V++G C++            MY     P
Sbjct: 356  SFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKP 415

Query: 564  DAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLL 743
            + V+YTAL + L + G   EA E++         P  +TY  V+H   + G++ +   ++
Sbjct: 416  NTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVV 475

Query: 744  EKMLARQPFRT--VYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTK 917
             +ML +  F T    N +I+ LC    + EA+K + + L     ++A     ++  +   
Sbjct: 476  REMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQS 535

Query: 918  GIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGI 1076
                +A  +   M+  N  PD      +   L   G++ EA    ++ +++G+
Sbjct: 536  DNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGL 588



 Score =  107 bits (268), Expect = 4e-21
 Identities = 81/348 (23%), Positives = 148/348 (42%), Gaps = 3/348 (0%)
 Frame = +3

Query: 39   DVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGKSLEAREMI 218
            D + Y  ++    +      A+++L+ M + G      ++  ++      GK   A +++
Sbjct: 135  DPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVL 194

Query: 219  NVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXXXXXXX 398
             + ++    PN +  +  +H L    KL +A   +  M   G  PN V            
Sbjct: 195  TMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDL 254

Query: 399  XKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNK-HPDAVT 575
             +V  A + + E+  KGC  + V++ TV+   CQ             M   NK  PD VT
Sbjct: 255  YQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVT 314

Query: 576  YTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLLEKML 755
            Y  L   L K G  +EA E + +   +G     V Y A+++ FC  GR+D   +++ +M+
Sbjct: 315  YNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMI 374

Query: 756  AR--QPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTKGIAL 929
             +   P    Y  V+  LC  G +EEA+K++ ++ +   K +  +   L+      G +L
Sbjct: 375  TKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSL 434

Query: 930  SAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERG 1073
             A ++          P+      V   L  +GKL EA +++   + +G
Sbjct: 435  EAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482


>emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  524 bits (1350), Expect = e-146
 Identities = 252/357 (70%), Positives = 295/357 (82%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            +V  M+SKGC PDVVTYT++I+G C+  K+D+AKKML+QMYKHGCKPNTVSYTALLNGLC
Sbjct: 430  IVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLC 489

Query: 183  HNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPV 362
             NG SLEAREM+N+SEE WW PNAITYSV+MHG RREGK SEACDLVREMI+KGFFP PV
Sbjct: 490  KNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPV 549

Query: 363  EXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXM 542
            E            KV EAK+++E+ L+ GCA+NVVNFTTVIHGFCQ             M
Sbjct: 550  EINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDM 609

Query: 543  YLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRV 722
            YLSNKHPD VTYT + DALGKKGR+EEA +L +KML  GL+PTPVTYR VIH++C+ GRV
Sbjct: 610  YLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRV 669

Query: 723  DDMMKLLEKMLARQPFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLME 902
            +D++KLLEKML+RQ  RT YNQVIEKLC FGNLE+A KL+GKVLRTASK+DANTCH+L+E
Sbjct: 670  EDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIE 729

Query: 903  SYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERG 1073
            SYL+KGI L +Y VAC+MF RNLIPDLKLCEKV+KKL+L+GK  EAD L+LRFVERG
Sbjct: 730  SYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 786



 Score =  154 bits (389), Expect = 4e-35
 Identities = 101/368 (27%), Positives = 180/368 (48%), Gaps = 6/368 (1%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYK-HGCKPNTVSYTALLNGL 179
            L+  M  KGC+PD ++Y  ++   C+  +I E + ++++M K     P+ V+Y   ++ L
Sbjct: 324  LIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHML 383

Query: 180  CHNGKSLEAREMINVSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNP 359
              +G   EA E +  +EE  +  + + YS ++H   REG++ +A ++V EM  KG  P+ 
Sbjct: 384  SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 443

Query: 360  VEXXXXXXXXXXXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXX 539
            V             KV +AKK L ++   GC  N V++T +++G C+             
Sbjct: 444  VTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCK---NGNSLEAREM 500

Query: 540  MYLSNKH---PDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQ 710
            M +S +    P+A+TY+ L     ++G+  EA +L+ +M+ KG  PTPV    +I   CQ
Sbjct: 501  MNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQ 560

Query: 711  WGRVDDMMKLLEKMLARQPFRTVYN--QVIEKLCDFGNLEEAEKLVGKVLRTASKLDANT 884
              +VD+  + +E+ L       V N   VI   C   +LE A  L+  +  +    D  T
Sbjct: 561  EEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVT 620

Query: 885  CHVLMESYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFV 1064
               ++++   KG    A K+A +M R  LIP       V  +    G++ +    +L+ +
Sbjct: 621  YTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVED----LLKLL 676

Query: 1065 ERGIQQKE 1088
            E+ + ++E
Sbjct: 677  EKMLSRQE 684



 Score =  144 bits (364), Expect = 3e-32
 Identities = 88/350 (25%), Positives = 170/350 (48%), Gaps = 3/350 (0%)
 Frame = +3

Query: 36   PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHNGKSLEAREM 215
            P+V+TY  +I G+C + ++++A +++ +M   GC P+ +SY  ++  LC   +  E R +
Sbjct: 300  PNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLL 359

Query: 216  IN-VSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFPNPVEXXXXXXXXX 392
            +  + ++    P+ +TY+  +H L + G   EA + +RE  E+ F  + V          
Sbjct: 360  MEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFC 419

Query: 393  XXXKVVEAKKYLEELLHKGCAINVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNKHPDAV 572
               ++ +AK+ + E+  KGC  +VV +T+VI+G CQ             MY     P+ V
Sbjct: 420  REGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTV 479

Query: 573  TYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGRVDDMMKLLEKM 752
            +YTAL + L K G   EA E++        +P  +TY  ++H F + G+  +   L+ +M
Sbjct: 480  SYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREM 539

Query: 753  LARQPFRT--VYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCHVLMESYLTKGIA 926
            + +  F T    N +I+ LC    ++EA++ + + L     ++      ++  +  K   
Sbjct: 540  IKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDL 599

Query: 927  LSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVERGI 1076
             +A  +   M+  N  PD+     +   L   G++ EA  L ++ +  G+
Sbjct: 600  EAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGL 649



 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 59/257 (22%), Positives = 105/257 (40%), Gaps = 36/257 (14%)
 Frame = +3

Query: 3    LVINMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVSYTALLNGLC 182
            LV  M  KG  P  V    +I   C+  K+DEAK+ ++Q   +GC  N V++T +++G C
Sbjct: 535  LVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFC 594

Query: 183  HNGKSLEAREMIN---VSEEHWWTPNAITYSVVMHGLRREGKLSEACDLVREMIEKGFFP 353
                   A  +++   +S +H   P+ +TY+ ++  L ++G++ EA  L  +M+  G  P
Sbjct: 595  QKDDLEAALSLLDDMYLSNKH---PDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIP 651

Query: 354  NPVEXXXXXXXXXXXXKVVEAKKYLEELL-------------HKGCA------------- 455
             PV             +V +  K LE++L              K C+             
Sbjct: 652  TPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGK 711

Query: 456  -------INVVNFTTVIHGFCQIXXXXXXXXXXXXMYLSNKHPDAVTYTALFDALGKKGR 614
                   I+      +I  +               M+  N  PD      +   L  +G+
Sbjct: 712  VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEGK 771

Query: 615  LEEAAELIVKMLGKGLV 665
             EEA +LI++ + +G +
Sbjct: 772  SEEADKLILRFVERGRI 788



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
 Frame = +3

Query: 540  MYLSNKHPDAVTYTALFDALGKKGRLEEAAELIVKMLGKGLVPTPVTYRAVIHRFCQWGR 719
            M +    P+ +TY  L        RLE+A ELI +M  KG  P  ++Y  V+   C+  R
Sbjct: 293  MQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKR 352

Query: 720  VDDMMKLLEKMLARQ---PFRTVYNQVIEKLCDFGNLEEAEKLVGKVLRTASKLDANTCH 890
            + ++  L+EKML      P +  YN  +  L   G+ +EA + + +      ++D     
Sbjct: 353  IKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYS 412

Query: 891  VLMESYLTKGIALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGKLVEADNLMLRFVER 1070
             ++ S+  +G    A ++  +MF +  IPD+     V   L  + K+ +A  ++ +  + 
Sbjct: 413  AIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKH 472

Query: 1071 G 1073
            G
Sbjct: 473  G 473