BLASTX nr result

ID: Glycyrrhiza23_contig00020413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020413
         (1051 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301723.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
ref|XP_003629672.1| F-box family protein [Medicago truncatula] g...   112   1e-22
ref|XP_003608293.1| FBD-associated F-box protein [Medicago trunc...   112   2e-22
ref|XP_003606067.1| FBD-associated F-box protein [Medicago trunc...   112   2e-22
ref|XP_003591875.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   111   3e-22

>ref|XP_002301723.1| predicted protein [Populus trichocarpa] gi|222843449|gb|EEE80996.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  167 bits (423), Expect = 4e-39
 Identities = 103/293 (35%), Positives = 149/293 (50%), Gaps = 1/293 (0%)
 Frame = -2

Query: 927 GDKMDWSAQNTKALIEKIYDRVKKRQLQGSTFKKNIWEEINNELKDITGENYGIERLKGK 748
           G+ M W  +N  A +  +Y+RVK+      +FK+  W EI+ EL    G+ YG ERL+GK
Sbjct: 10  GEDMRWPEKNEDAFLANLYERVKRHPNGTPSFKQVDWNEIDEELFSAIGQKYGAERLQGK 69

Query: 747 FNRLRLQHREFSTLLSRMGVTWDSGSNKVKASDEVWEDLYRQGRFYKHFKKHGFEHDYDY 568
           +NRLRL+HR+FS L+S  GVT+ S SN+V A++EVW+   ++ + Y  FK  G     +Y
Sbjct: 70  YNRLRLKHRQFSDLISHTGVTYSSSSNQVYATEEVWKMFKKKHKNYITFKSKGCR---NY 126

Query: 567 EILAEIF-KGKLHQASTQKPPTFDEEREMEGVFLSKGXXXXXXXXXXXXDSMQELDXXXX 391
           E+L +IF     H ASTQ P   D   + E  F S+G             S  +      
Sbjct: 127 EMLGQIFNNSSTHHASTQLPLNSDGNHQNEEQFFSQGVHVIEGEKSCAGSSRGK----RP 182

Query: 390 XXXXXXXXRCKDAESSRLEKLEASLSQQTESMCSSTXXXXXXXXXXXXXANEATSSITDP 211
                    C + E ++LE  +  L     S+ +                ++AT +   P
Sbjct: 183 IDDYLAGCNCVNKE-AKLENFDFCLEILASSLSARAERDLAKAKKYKEMPDQATRA---P 238

Query: 210 YSIDACMELLNSIEDIPSKIYNNALVKFTNKDWRHMFIKMPPFRRKDWLASLE 52
           YSID CM+ L +++D+    Y  AL KF + DWR MF+KM   R+K WL SLE
Sbjct: 239 YSIDECMDELENLDDVSDTSYIKALEKFKDPDWRIMFVKMSLVRKKSWLKSLE 291


>ref|XP_003629672.1| F-box family protein [Medicago truncatula]
            gi|355523694|gb|AET04148.1| F-box family protein
            [Medicago truncatula]
          Length = 709

 Score =  112 bits (281), Expect = 1e-22
 Identities = 86/334 (25%), Positives = 133/334 (39%), Gaps = 6/334 (1%)
 Frame = -2

Query: 1038 PVSCPSRCRVPHSRAHVSSSTYPLQS**HKMRGKSEKGDKMDWSAQNTKALIEKIYDRVK 859
            P S PS C       H+  +         K+    +  D M W    TK  I+ + D V 
Sbjct: 406  PASAPSPCH------HLCCA--------EKVTTNVDSSDSMFWPDIVTKTFIDIMVDEVT 451

Query: 858  KRQLQGSTFKKNIWEEINNELKDITGENYGIERLKGKFNRLRLQHREFSTLLSRMGVTWD 679
            K  +    F    W  + N L  IT  +Y  E+LK K + LR    EF +LL  +G  W+
Sbjct: 452  KGNMSNGVFHTRTWTSMTNRLNSITNCSYEEEQLKAKMHCLRAMFHEFYSLLQNVGFVWN 511

Query: 678  SGSNKVKASDEVWEDLYRQGRFYKHFKKHGFEHDYDYEILAEIFKGK-----LHQASTQK 514
            S +N V AS+EVW++  +       F+  G +H   Y +L  IF        LH +  Q 
Sbjct: 512  SETNTVTASEEVWKNYLKTHDKASQFQNKGCDH---YRLLEIIFNKYNETEVLHHSIAQD 568

Query: 513  PPTFDEEREMEG-VFLSKGXXXXXXXXXXXXDSMQELDXXXXXXXXXXXXRCKDAESSRL 337
             P  ++E E +   F ++             + +QE++             C      + 
Sbjct: 569  QPNTNKENEHDNQYFNTRSANCVCVDNDSSDNGIQEVE-------------CITCRGKQK 615

Query: 336  EKLEASLSQQTESMCSSTXXXXXXXXXXXXXANEATSSITDPYSIDACMELLNSIEDIPS 157
             +L+   S++  +                     ++S +T   S+  C+  L  I DI  
Sbjct: 616  IQLKDRTSEKVSTSRQMGDAIAAWAQAWGKIVEASSSHVTTNCSLTKCVVALEEIGDISD 675

Query: 156  KIYNNALVKFTNKDWRHMFIKMPPFRRKDWLASL 55
             IY  AL KF + DWR MF+ M   +R+ WL  L
Sbjct: 676  DIYGKALEKFKDPDWREMFVAMSTDKRRGWLFRL 709


>ref|XP_003608293.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355509348|gb|AES90490.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 798

 Score =  112 bits (280), Expect = 2e-22
 Identities = 85/305 (27%), Positives = 125/305 (40%), Gaps = 6/305 (1%)
 Frame = -2

Query: 951  KMRGKSEKGDKMDWSAQNTKALIEKIYDRVKKRQLQGSTFKKNIWEEINNELKDITGENY 772
            KM    +  D   W    TKA IE + D V K  +Q   F    W  +  +L   T  +Y
Sbjct: 514  KMTTNVDNCDSTLWPELVTKAFIEIMVDEVTKENMQNGVFHTGTWTSMTAKLNSTTNCSY 573

Query: 771  GIERLKGKFNRLRLQHREFSTLLSRMGVTWDSGSNKVKASDEVWEDLYRQGRFYKHFKKH 592
              E+LK K + LR    EF +LL      W++ +N V AS+EVW++  +       F+  
Sbjct: 574  SEEQLKAKMHSLRSMFHEFYSLLQNTEFGWNAETNIVTASEEVWQNYLKTHDKASQFQNK 633

Query: 591  GFEHDYDYEILAEIFKGK-----LHQASTQKPPTFDEEREMEG-VFLSKGXXXXXXXXXX 430
            G +H   Y++L  IF        LH + TQ  P  D+E E+    F ++           
Sbjct: 634  GCDH---YKLLEIIFNKNNETEVLHHSFTQDQPNTDKENELNNQYFNTRSANIVCVDDDS 690

Query: 429  XXDSMQELDXXXXXXXXXXXXRCKDAESSRLEKLEASLSQQTESMCSSTXXXXXXXXXXX 250
              + +QE+                  E  ++E  E    ++     S+T           
Sbjct: 691  SNNDIQEVGRITCN------------EKQKIEVKEHIFRKE-----STTHQIGEALVERG 733

Query: 249  XXANEATSSITDPYSIDACMELLNSIEDIPSKIYNNALVKFTNKDWRHMFIKMPPFRRKD 70
                 ++S +T   S+  C+  L  IEDI   IY  AL KF + DWR MFI M   R+  
Sbjct: 734  KIVEASSSHVTKDCSLTKCVVALEEIEDISDDIYGKALEKFKDPDWREMFIAMSKDRKCG 793

Query: 69   WLASL 55
            WL  L
Sbjct: 794  WLYRL 798


>ref|XP_003606067.1| FBD-associated F-box protein [Medicago truncatula]
            gi|355507122|gb|AES88264.1| FBD-associated F-box protein
            [Medicago truncatula]
          Length = 790

 Score =  112 bits (280), Expect = 2e-22
 Identities = 85/305 (27%), Positives = 125/305 (40%), Gaps = 6/305 (1%)
 Frame = -2

Query: 951  KMRGKSEKGDKMDWSAQNTKALIEKIYDRVKKRQLQGSTFKKNIWEEINNELKDITGENY 772
            KM    +  D   W    TKA IE + D V K  +Q   F    W  +  +L   T  +Y
Sbjct: 506  KMTTNVDNCDSTLWPELVTKAFIEIMVDEVTKENMQNGVFHTGTWTSMTAKLNSTTNCSY 565

Query: 771  GIERLKGKFNRLRLQHREFSTLLSRMGVTWDSGSNKVKASDEVWEDLYRQGRFYKHFKKH 592
              E+LK K + LR    EF +LL      W++ +N V AS+EVW++  +       F+  
Sbjct: 566  SEEQLKAKMHSLRSMFHEFYSLLQNTEFGWNAETNIVTASEEVWQNYLKTHDKASQFQNK 625

Query: 591  GFEHDYDYEILAEIFKGK-----LHQASTQKPPTFDEEREMEG-VFLSKGXXXXXXXXXX 430
            G +H   Y++L  IF        LH + TQ  P  D+E E+    F ++           
Sbjct: 626  GCDH---YKLLEIIFNKNNETEVLHHSFTQDQPNTDKENELNNQYFNTRSANIVCVDDDS 682

Query: 429  XXDSMQELDXXXXXXXXXXXXRCKDAESSRLEKLEASLSQQTESMCSSTXXXXXXXXXXX 250
              + +QE+                  E  ++E  E    ++     S+T           
Sbjct: 683  SNNDIQEVGRITCN------------EKQKIEVKEHIFRKE-----STTHQIGEALVERG 725

Query: 249  XXANEATSSITDPYSIDACMELLNSIEDIPSKIYNNALVKFTNKDWRHMFIKMPPFRRKD 70
                 ++S +T   S+  C+  L  IEDI   IY  AL KF + DWR MFI M   R+  
Sbjct: 726  KIVEASSSHVTKDCSLTKCVVALEEIEDISDDIYGKALEKFKDPDWREMFIAMSKDRKCG 785

Query: 69   WLASL 55
            WL  L
Sbjct: 786  WLYRL 790


>ref|XP_003591875.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355480923|gb|AES62126.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 702

 Score =  111 bits (277), Expect = 3e-22
 Identities = 89/308 (28%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
 Frame = -2

Query: 951  KMRGKSEKGDKMDWSAQNTKALIEKIYDRVKKRQLQGSTFKKNIWEEINNELKDITGENY 772
            KM    +  D M W    TKA I+ + D V K  +    F  + W  +   L  IT  ++
Sbjct: 435  KMASNVDNSDSMLWPDLVTKAFIDIMVDEVTKGNMPNGVFHTSTWTSMTTRLNSITNRSH 494

Query: 771  GIERLKGKFNRLRLQHREFSTLLSRMGVTWDSGSNKVKASDEVWEDLYRQGRFYKHFKKH 592
              E+LK K +RLR    EF +LL   G TW++ +N V AS+EV ++       Y    + 
Sbjct: 495  KKEQLKAKMDRLRAMFHEFYSLLQNTGFTWNAETNIVTASEEVRQN-------YLKLLEI 547

Query: 591  GFEHDYDYEILAEIFKGKLHQASTQKPPTFDEEREMEGVFLSKGXXXXXXXXXXXXDSMQ 412
             F  + + E+        LHQ+ TQ PP  D+E E++    + G             +  
Sbjct: 548  IFNKNNEREV--------LHQSYTQDPPNTDKENELDNQCCNIG-----------SVNFV 588

Query: 411  ELDXXXXXXXXXXXXRCKDAESSRLEKLEASLSQQTE--------SMCSSTXXXXXXXXX 256
             +D               D+ ++ +++LE+  S   +        SM  ST         
Sbjct: 589  SVD--------------NDSSNNDIQELESITSSGKQKHQVKDHTSMKESTSGRMGDAHA 634

Query: 255  XXXXANEATSSI-TDPYSIDACMELLNSIEDIPSKIYNNALVKFTNKDWRHMFIKMPPFR 79
                  EATSS  T   S+  C+  L  IEDI   I+  AL KF + DWR MF+ M   R
Sbjct: 635  ASGKIVEATSSHGTIDCSLTKCVIALEEIEDISDDIFGKALEKFKDPDWREMFMAMSNDR 694

Query: 78   RKDWLASL 55
            R+ WL  L
Sbjct: 695  RRGWLFRL 702


Top