BLASTX nr result

ID: Glycyrrhiza23_contig00020399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020399
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cy...   142   3e-32
ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786...   116   2e-24
ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779...   113   1e-23
ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [S...    99   5e-19
ref|XP_002310655.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 248

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/98 (77%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   TAEAAQKALELDHTELLRRPIKVDIAE-KHEYVPNRSNWSNSFQKGERFQSLTVFVIGFD 177
           TAEAA+KALEL +TELLRRPI VD+AE K EY  +RSNWSNSFQK ER QS TVFV GFD
Sbjct: 111 TAEAAKKALELHNTELLRRPIGVDLAEEKGEYTYSRSNWSNSFQKCERAQSPTVFVTGFD 170

Query: 178 TSLAEEKVKASLEEHFSSCGEITRISIPTFRDSGAVRG 291
           +SL  EK+KASLEEHF SCGEI RISIPTF DSGAV+G
Sbjct: 171 SSLPAEKLKASLEEHFGSCGEIQRISIPTFPDSGAVKG 208


>ref|XP_003537777.1| PREDICTED: uncharacterized protein LOC100786132 [Glycine max]
          Length = 748

 Score =  116 bits (290), Expect = 2e-24
 Identities = 57/98 (58%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   TAEAAQKALELDHTELLRRPIKVDIA-EKHEYVPNRSNWSNSFQKGERFQSLTVFVIGFD 177
           TAEAAQ AL L+  +L  R +++D+A E+  Y PN SNW+NS QK ER QS T+FV GFD
Sbjct: 528 TAEAAQNALGLNGQQLFNRELRLDLARERGAYTPNSSNWNNSSQKSERGQSQTIFVRGFD 587

Query: 178 TSLAEEKVKASLEEHFSSCGEITRISIPTFRDSGAVRG 291
           TSL E++++ SL+EHF SCG+ITR+SIP   +SGAV+G
Sbjct: 588 TSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKG 625


>ref|XP_003540672.1| PREDICTED: uncharacterized protein LOC100779929 [Glycine max]
          Length = 744

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/98 (58%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   TAEAAQKALELDHTELLRRPIKVDIA-EKHEYVPNRSNWSNSFQKGERFQSLTVFVIGFD 177
           TA AAQKAL L+  +L  R +++D+A E+  Y PN SNW+NS QK  R QS TVFV GFD
Sbjct: 523 TAAAAQKALGLNGQQLFNRELRLDLARERGAYTPNSSNWNNSSQKSGRGQSQTVFVRGFD 582

Query: 178 TSLAEEKVKASLEEHFSSCGEITRISIPTFRDSGAVRG 291
           TSL E++++ SL+EHF SCG+ITR+SIP   +SGAV+G
Sbjct: 583 TSLGEDEIRGSLQEHFGSCGDITRVSIPKDYESGAVKG 620


>ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
           gi|241920962|gb|EER94106.1| hypothetical protein
           SORBIDRAFT_01g019710 [Sorghum bicolor]
          Length = 664

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/98 (50%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1   TAEAAQKALELDHTELLRRPIKVDIA-EKHEYVPNRSNWSNSFQKGERFQSLTVFVIGFD 177
           TAEAAQKALE    +L+ R +++D+A E+  Y PN    + SF+K  +    TVF+ GFD
Sbjct: 462 TAEAAQKALEFGGRDLMGRSLRIDLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKGFD 521

Query: 178 TSLAEEKVKASLEEHFSSCGEITRISIPTFRDSGAVRG 291
           TS+ E++++++LEEHF SCG+ITRISIP   D+GA +G
Sbjct: 522 TSVGEDQIRSALEEHFRSCGDITRISIPKDYDTGASKG 559


>ref|XP_002310655.1| predicted protein [Populus trichocarpa] gi|222853558|gb|EEE91105.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/97 (51%), Positives = 68/97 (70%)
 Frame = +1

Query: 1   TAEAAQKALELDHTELLRRPIKVDIAEKHEYVPNRSNWSNSFQKGERFQSLTVFVIGFDT 180
           TAEAAQKAL+L    LL R +++D+A +       S  S+SF KG   QS T+FV GFD 
Sbjct: 347 TAEAAQKALKLHGNTLLGRDVRLDLAREKGSNTPYSKDSSSFPKGGSGQSQTIFVRGFDK 406

Query: 181 SLAEEKVKASLEEHFSSCGEITRISIPTFRDSGAVRG 291
           S  E+++++SL+EHF SCGEI R+SIPT  D+GA++G
Sbjct: 407 SAGEDEIRSSLQEHFGSCGEIKRVSIPTDYDTGAIKG 443


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