BLASTX nr result

ID: Glycyrrhiza23_contig00020356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020356
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH47224.1| similar to 50S ribosomal protein L35 [Lupinus an...   160   5e-37
ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatu...   154   3e-35
ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycin...   147   4e-33
ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808...   140   4e-31
gb|ACU24149.1| unknown [Glycine max]                                  139   1e-30

>emb|CCH47224.1| similar to 50S ribosomal protein L35 [Lupinus angustifolius]
          Length = 196

 Score =  160 bits (404), Expect = 5e-37
 Identities = 98/165 (59%), Positives = 102/165 (61%), Gaps = 2/165 (1%)
 Frame = -2

Query: 856 MQRWLTKLRCFAVQ-SRQALPPPSCRRLIXXXXXXXXXXXXASTNRISRPPFNFSSWPLQ 680
           MQR  TKLR FAV  SRQ+LP PS RR              ASTN ISRP FNFSS+  Q
Sbjct: 1   MQRCATKLRSFAVNYSRQSLPTPSPRRFFHHAPPQPFIHSLASTNLISRPIFNFSSFSPQ 60

Query: 679 YASISRPSPFSPSL-VQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXSRFRTMND 503
                RPSPF  SL VQVRHVSSRERKKRRKPMTPVTSKL             RFR MND
Sbjct: 61  SF---RPSPFPTSLLVQVRHVSSRERKKRRKPMTPVTSKLKKTKMKSYSSFKLRFRVMND 117

Query: 502 GNIRRWREGKRHNAHXXXXXXXXXXXKPAIVPAAYAKVMKKLSFC 368
           GNIRRW+EGKRHNAH           KP IVPAAYAK +K L  C
Sbjct: 118 GNIRRWKEGKRHNAHLKSKISKRRLRKPGIVPAAYAKFLKGLKGC 162


>ref|XP_003612658.1| 50S ribosomal protein L35 [Medicago truncatula]
           gi|355513993|gb|AES95616.1| 50S ribosomal protein L35
           [Medicago truncatula]
          Length = 157

 Score =  154 bits (389), Expect = 3e-35
 Identities = 96/166 (57%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
 Frame = -2

Query: 859 MMQRWLTKLRCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXASTNRISRPPFNFSSWPLQ 680
           MMQR L KLR  AVQS Q    PS RR +             S N ISRP FNFS   L 
Sbjct: 1   MMQRLLPKLRSLAVQSLQ----PSSRRFLHHSLPQPLHSA--SINPISRPLFNFSPSSLH 54

Query: 679 YASISRPSPFSPSLV-QVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXSRFRTMND 503
               S PSPFSPSLV QVRHVSSRERKK+RKPMTPV SKL            SRFR MND
Sbjct: 55  K---SLPSPFSPSLVLQVRHVSSRERKKKRKPMTPVKSKLKKTKMKSYSSYKSRFRLMND 111

Query: 502 GNIRRWREGKRHNAHXXXXXXXXXXXKPAIVPAAYAKVMKKLSFCG 365
           G  RRWREGKRHNAH            PA+VP AYAKVMKKL FCG
Sbjct: 112 GTFRRWREGKRHNAHLKSKIAKRRLRLPALVPVAYAKVMKKLGFCG 157


>ref|NP_001240123.1| uncharacterized protein LOC100814427 [Glycine max]
           gi|255647090|gb|ACU24013.1| unknown [Glycine max]
          Length = 156

 Score =  147 bits (371), Expect = 4e-33
 Identities = 93/163 (57%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
 Frame = -2

Query: 856 MQRWLTKLRCFA-VQSRQALPPPSCRRLIXXXXXXXXXXXXASTNRISRPPFNFSSWPLQ 680
           M R LTKLRCFA VQSRQ L PPS RRL+             S  RISRP F  SSWPL 
Sbjct: 1   MLRSLTKLRCFAAVQSRQVLSPPSSRRLLHHSPPPQPLHSA-SNFRISRPSFISSSWPLH 59

Query: 679 YASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXSRFRTMNDG 500
               S PSP   SLVQVRH SS+ERK  RKP+ P  SK+            SRFRTMNDG
Sbjct: 60  ---ASHPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRTMNDG 111

Query: 499 NIRRWREGKRHNAHXXXXXXXXXXXKPAIVPAAYAKVMKKLSF 371
           NIRRW+EGKRHNAH           KP IVP AYAKVMKKL+F
Sbjct: 112 NIRRWKEGKRHNAHLKSKKSKRRLRKPGIVPVAYAKVMKKLNF 154


>ref|XP_003534307.1| PREDICTED: uncharacterized protein LOC100808184 [Glycine max]
          Length = 155

 Score =  140 bits (353), Expect = 4e-31
 Identities = 89/162 (54%), Positives = 96/162 (59%)
 Frame = -2

Query: 856 MQRWLTKLRCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXASTNRISRPPFNFSSWPLQY 677
           M R LTKLRC AVQSRQ L PPS RRL+             S  RIS P F FS  P   
Sbjct: 1   MLRSLTKLRCLAVQSRQVLSPPSSRRLLHHLPPPQSLHSA-SNFRISSPSFIFSWCP--- 56

Query: 676 ASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXSRFRTMNDGN 497
              S+PSP   SLVQVRH SS+ERK  RKP+ P  SK+            SRFR MNDGN
Sbjct: 57  PHASQPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGN 111

Query: 496 IRRWREGKRHNAHXXXXXXXXXXXKPAIVPAAYAKVMKKLSF 371
           IRRW+EGKRHNAH           KP IVPAAYAKVMKKL+F
Sbjct: 112 IRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYAKVMKKLNF 153


>gb|ACU24149.1| unknown [Glycine max]
          Length = 155

 Score =  139 bits (349), Expect = 1e-30
 Identities = 88/162 (54%), Positives = 95/162 (58%)
 Frame = -2

Query: 856 MQRWLTKLRCFAVQSRQALPPPSCRRLIXXXXXXXXXXXXASTNRISRPPFNFSSWPLQY 677
           M R LTKLRC AVQSRQ L PPS RRL+             S  RIS P F FS  P   
Sbjct: 1   MLRSLTKLRCLAVQSRQVLSPPSSRRLLHHLPPPQSLHSA-SNFRISSPSFIFSWCP--- 56

Query: 676 ASISRPSPFSPSLVQVRHVSSRERKKRRKPMTPVTSKLNXXXXXXXXXXXSRFRTMNDGN 497
              S+PSP   SLVQVRH SS+ERK  RKP+ P  SK+            SRFR MNDGN
Sbjct: 57  PHASQPSP---SLVQVRHASSKERK--RKPVPPTVSKVKKTKMKSYSSFKSRFRAMNDGN 111

Query: 496 IRRWREGKRHNAHXXXXXXXXXXXKPAIVPAAYAKVMKKLSF 371
           IRRW+EGKRHNAH           KP IVPAAY KVMKKL+F
Sbjct: 112 IRRWKEGKRHNAHLKSKKSKRRLRKPGIVPAAYTKVMKKLNF 153