BLASTX nr result

ID: Glycyrrhiza23_contig00020349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020349
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...    72   4e-11
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    64   1e-08
ref|XP_002520430.1| conserved hypothetical protein [Ricinus comm...    62   6e-08
ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = +2

Query: 110 MTTKTHRLTTCHRHPTKPVTGFCAYCLRERLAGIESS 220
           MT+KTHR TTCHRHP+ PVTGFCA CLRERLAGI+SS
Sbjct: 1   MTSKTHRFTTCHRHPSTPVTGFCASCLRERLAGIDSS 37


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/31 (83%), Positives = 30/31 (96%)
 Frame = +2

Query: 122 THRLTTCHRHPTKPVTGFCAYCLRERLAGIE 214
           +HRL+TCHRHP+KPVTGFCA CLRERLAGI+
Sbjct: 9   SHRLSTCHRHPSKPVTGFCASCLRERLAGID 39


>ref|XP_002520430.1| conserved hypothetical protein [Ricinus communis]
           gi|223540272|gb|EEF41843.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +2

Query: 95  LPLSPMTTKTHRLTTCHRHPTKPVTGFCAYCLRERLAGIE 214
           + + P     HR +TCHRHPT+P+TGFCA CLRERLAGI+
Sbjct: 1   MTVPPKPLHHHRHSTCHRHPTRPITGFCASCLRERLAGID 40


>ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|222847087|gb|EEE84634.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = +2

Query: 98  PLSPMTTKTHRLTTCHRHPTKPVTGFCAYCLRERLAGIE 214
           PL P   K HR ++C+RHP+KP+TGFCA CLRERLAGI+
Sbjct: 4   PLQPQLQK-HRHSSCNRHPSKPITGFCASCLRERLAGID 41


>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/30 (76%), Positives = 27/30 (90%)
 Frame = +2

Query: 125 HRLTTCHRHPTKPVTGFCAYCLRERLAGIE 214
           HR  +CHRHP+KP+TGFCA CLRERLAGI+
Sbjct: 12  HRHPSCHRHPSKPITGFCASCLRERLAGID 41