BLASTX nr result

ID: Glycyrrhiza23_contig00020348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020348
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...   176   4e-42
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...   115   9e-24
emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]   108   9e-22
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20
ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|2...   102   6e-20

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score =  176 bits (445), Expect = 4e-42
 Identities = 115/218 (52%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
 Frame = -3

Query: 653 GIESSPAE-PELRRTKSCSGGGADLPSSSSAALEPRRRSCEVLAAPSRPRNTLSDLFNXX 477
           GI+SS AE PELRRTKS SG   D PSSS AA EPRRRSCEV   P     +LSDLFN  
Sbjct: 33  GIDSSSAESPELRRTKSFSGRTTDAPSSS-AAPEPRRRSCEVRLPPLG--GSLSDLFNVD 89

Query: 476 XXXXXXXXXQTPNRKPELDLGNSGFEIRDYDGCNAIRVFVEDDEETKTMKEFIDLELRSR 297
                      PNR  E+    +G  I + +  + +RV  +DD E KTMKEFIDLELRS+
Sbjct: 90  DKKKKP-----PNRNAEICSSTTGGGIGEKERGDPVRVSGDDDGEGKTMKEFIDLELRSK 144

Query: 296 KNAGRDFRDIAESFWDAASVFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLTCVEVEKQ 117
           KN GRDFRDIA SF +AASVFS                                  VEK 
Sbjct: 145 KNTGRDFRDIAASFREAASVFSKRLMKWRRKQNAKRNRYNDGLGAGAGVG-----PVEKL 199

Query: 116 GARNLRETQSEVGEYGMSLGRRSCDTDPRLSVDDSRYS 3
           G R L E QSEVGEYG++LGRRSCDTDPRLSVDDSR+S
Sbjct: 200 GLRTLHEAQSEVGEYGIALGRRSCDTDPRLSVDDSRFS 237


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score =  115 bits (287), Expect = 9e-24
 Identities = 88/238 (36%), Positives = 115/238 (48%), Gaps = 22/238 (9%)
 Frame = -3

Query: 650 IESSPAEPELRRTKSCSGGGADLPSSSSAALEPRRRSCEVLAAPSRPRNTLSDLFNXXXX 471
           ++++ +  ELRR+KS S    +      + ++  R+SC+V     R  N+LSDLF     
Sbjct: 48  VQNNHSSAELRRSKSHSAAKCEAGGIGQSEVQ-HRKSCDV-----RSGNSLSDLF----- 96

Query: 470 XXXXXXXQTPNRKPELDLGNSGFEIRDY---------------DGCNAIRVFVEDDEETK 336
                  +  NR+ E++  N GFE+R+                 G   I  F  ++ E K
Sbjct: 97  -CREDKPRCTNREVEIESENLGFELREVVGNGRQFRASEGIIGPGLGTIDGFSGEEAEFK 155

Query: 335 TMKEFIDLELRSRKNAGRDFRDIAESFWDAASVFSXXXXXXXXXXXXXXXXXXXXXXXXX 156
           T+KEFIDLE R +KNAGRD R+IA S W+AAS FS                         
Sbjct: 156 TVKEFIDLEFRRKKNAGRDLREIAGSVWEAASGFSKKLGKWRKKQKRKNLSNNSYVGAVK 215

Query: 155 XXXGLTCVEVEKQGARNLRETQSEVGEYGMSLGRRSCDTDPRLSV-------DDSRYS 3
                   E  K  A  +RET+SEVGEYG  LGRRSCDTDPR SV       DDSRYS
Sbjct: 216 -------AEDIKPRAHEIRETRSEVGEYG--LGRRSCDTDPRFSVDAGRMSLDDSRYS 264


>emb|CAN79178.1| hypothetical protein VITISV_016729 [Vitis vinifera]
          Length = 603

 Score =  108 bits (270), Expect = 9e-22
 Identities = 91/235 (38%), Positives = 111/235 (47%), Gaps = 27/235 (11%)
 Frame = -3

Query: 626 ELRRTKSCSGGGAD-LPSSSSAALEPRRRSCEVLAAPSRPRNTLSDLFNXXXXXXXXXXX 450
           E RR KS S G  + LP SS    E RR+SC+V       R+TL DLF            
Sbjct: 72  EFRRCKSLSAGKCEVLPGSS----EQRRKSCDVGV-----RSTLCDLFTLDDERNG---- 118

Query: 449 QTPNRKPELDLGNSGF------------------EIRDYDGCNAIRVFV--------EDD 348
            +   K +++  N GF                  EIR ++   A  V V        ED+
Sbjct: 119 -SNREKFQVESRNLGFQRITAPVLESREEEENEEEIRGFEEVLASDVNVIDKGIEEFEDN 177

Query: 347 EETKTMKEFIDLELRSRKNAGRDFRDIAESFWDAASVFSXXXXXXXXXXXXXXXXXXXXX 168
           EE KTMKE IDLE ++RK   RDF+DIA SFW AASVFS                     
Sbjct: 178 EEVKTMKEHIDLEWKNRKPNVRDFKDIAGSFWLAASVFS--------KKLRKWRQKQKMK 229

Query: 167 XXXXXXXGLTCVEVEKQGARNLRETQSEVGEYGMSLGRRSCDTDPRLSVDDSRYS 3
                   L  +EVEK   + +RETQSE+ +YG  LGRRSCDTDPR S+D  R S
Sbjct: 230 KPSGSGHSLEAMEVEKPIGKQIRETQSEIADYG--LGRRSCDTDPRFSMDAGRIS 282


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  102 bits (255), Expect = 5e-20
 Identities = 89/249 (35%), Positives = 108/249 (43%), Gaps = 40/249 (16%)
 Frame = -3

Query: 629 PELRRTKSCSGGGADLPSSSSAALEPRRRSCEVLAAPSRPRNTLSDLFNXXXXXXXXXXX 450
           PELRRTKS S   A      S   EP+R+SC+V     R RNTL  LFN           
Sbjct: 90  PELRRTKSFS---ASKNEGFSGVFEPQRKSCDV-----RVRNTLWSLFNQDSER------ 135

Query: 449 QTPNRKPELDLGNSGFE-IRDYDGCNAIR--VF---------------------VEDDEE 342
             P+ K E   G    E +     C+++R  VF                      EDDEE
Sbjct: 136 -NPSVKKEPFKGGPEIEAVEPRISCSSVRGPVFESKEEEEIENETDTENENEDDFEDDEE 194

Query: 341 ----------------TKTMKEFIDLELRSRKNAGRDFRDIAESFWDAASVFSXXXXXXX 210
                            KTMK+ IDL+ +S+K +GRDF++IA SFW AASVFS       
Sbjct: 195 GIVIEPEPVQEAVLEELKTMKDHIDLDSQSKKTSGRDFKEIAGSFWSAASVFSKKLQKWR 254

Query: 209 XXXXXXXXXXXXXXXXXXXXXGLTCVEVEKQGARNLRETQSEVGEYGMSLGRRSCDTDPR 30
                                    + VEK   R  RETQSE+ +YG   GRRSCDTDPR
Sbjct: 255 QKQKLKKQRNDGPGS--------ATLPVEKPIGRQYRETQSEIADYG--FGRRSCDTDPR 304

Query: 29  LSVDDSRYS 3
            S+D  R S
Sbjct: 305 FSLDAGRIS 313


>ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|222847087|gb|EEE84634.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score =  102 bits (254), Expect = 6e-20
 Identities = 87/240 (36%), Positives = 113/240 (47%), Gaps = 32/240 (13%)
 Frame = -3

Query: 626 ELRRTKSCSGGGADLPSSSSAAL-----------EPRRRSCEVLAAPSRPRNTLSDLFNX 480
           ELRR+KS S    + P++ +A+            EPRR+SC+V       RNTLS+LF+ 
Sbjct: 56  ELRRSKSYSSTTKNNPNNHNASSTSTSSTTATTSEPRRKSCDV----GPIRNTLSELFHV 111

Query: 479 XXXXXXXXXXQTPNRKPE-LDLGNSGFEIRDYDGCNAIRVFV-------------EDDEE 342
                      +  +KP+ LD   SG E+++ +G   IRV               E+D E
Sbjct: 112 DDKRIN-----SSAQKPKCLD---SGLELKEEEGFGEIRVLALDANDSERNVEDFEEDGE 163

Query: 341 TKTMKEFIDLELRSRKNAGRDFRDIAESFWDAASVFSXXXXXXXXXXXXXXXXXXXXXXX 162
            KTMKEFIDLE   +KN GRD + IA SFW+ ASVFS                       
Sbjct: 164 LKTMKEFIDLEWERKKNGGRDLKYIAGSFWEVASVFSKKLGKWQ---------------- 207

Query: 161 XXXXXGLTCVEVEKQGARNLRETQSEVGEYGMSLGRRSCDTDP-------RLSVDDSRYS 3
                        KQ  +  ++ ++  G YG  LGRRSCDTDP       RLSVDDSRYS
Sbjct: 208 ------------RKQKKKEKKDRENLGGLYG--LGRRSCDTDPRLSVDAARLSVDDSRYS 253


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