BLASTX nr result

ID: Glycyrrhiza23_contig00020346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020346
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|3...   119   3e-25
ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-li...   100   1e-19
gb|AFK37682.1| unknown [Lotus japonicus]                               99   4e-19
emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]    88   8e-16
ref|XP_002326322.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|355514379|gb|AES96002.1|
           SGT1-like protein [Medicago truncatula]
          Length = 654

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/104 (60%), Positives = 69/104 (66%)
 Frame = +1

Query: 1   DMESALKRPGEASNSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFTQSYSDVMNEE 180
           +MES +KRPGEA NSNI                               F QSYSD MNE+
Sbjct: 514 EMESVMKRPGEADNSNIEEGSSSDLDFDDSDESDGVESAEDNDDEEDAFVQSYSDAMNEQ 573

Query: 181 LKATTLQKSFVRANEQIPRKDEGTSNAAEDMDEDFSPVDVDVNL 312
           LKATTLQKSFVRA+EQIP+KDEGTS+AAEDMDEDFSPVDVDVNL
Sbjct: 574 LKATTLQKSFVRASEQIPKKDEGTSHAAEDMDEDFSPVDVDVNL 617


>ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-like [Glycine max]
          Length = 645

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/106 (55%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = +1

Query: 1   DMESALKRP-GEASNSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFTQSYSDVMNE 177
           DMES +    GE +NSNI                               F +SYSD MNE
Sbjct: 503 DMESIMMHSDGEVANSNIEEGSSSDLDFDNSDDSDIVELDEDNEDREDIFMRSYSDAMNE 562

Query: 178 ELKATTLQKSFVRANEQIPRKDEGTSNAAED-MDEDFSPVDVDVNL 312
           ELKATTLQKSFVRANEQIP+KD+GTSNA+E  MDEDFSPVDVDVNL
Sbjct: 563 ELKATTLQKSFVRANEQIPKKDQGTSNASEHIMDEDFSPVDVDVNL 608


>gb|AFK37682.1| unknown [Lotus japonicus]
          Length = 108

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 51/57 (89%), Positives = 53/57 (92%)
 Frame = +1

Query: 142 TFTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNAAEDMDEDFSPVDVDVNL 312
           TF QSYSD MNEELKATTLQKSFVRANEQIP K EGTS+AAEDMDE+FSPVDVDVNL
Sbjct: 16  TFRQSYSDAMNEELKATTLQKSFVRANEQIP-KHEGTSHAAEDMDEEFSPVDVDVNL 71


>emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]
          Length = 933

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 41/56 (73%), Positives = 50/56 (89%)
 Frame = +1

Query: 145 FTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNAAEDMDEDFSPVDVDVNL 312
           F QSYSD +NEELK++TL+KSFVRANEQ   ++EGTSNA EDMD++F+PVDVDVNL
Sbjct: 555 FMQSYSDALNEELKSSTLKKSFVRANEQPNNRNEGTSNATEDMDDEFTPVDVDVNL 610


>ref|XP_002326322.1| predicted protein [Populus trichocarpa] gi|222833515|gb|EEE71992.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/57 (64%), Positives = 47/57 (82%)
 Frame = +1

Query: 142 TFTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNAAEDMDEDFSPVDVDVNL 312
           TF  +YSD +NEELK TTL+KSFVR ++Q+ +K+E TSN  E MDE+F+PVDVDVNL
Sbjct: 546 TFMNTYSDALNEELKNTTLKKSFVRTDDQLSKKNEETSNTMEGMDEEFTPVDVDVNL 602


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