BLASTX nr result

ID: Glycyrrhiza23_contig00020297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020297
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45176.1| unknown [Lotus japonicus]                              290   2e-76
ref|XP_003607878.1| Cytochrome c6 [Medicago truncatula] gi|12435...   289   7e-76
gb|AFK42813.1| unknown [Medicago truncatula]                          288   1e-75
ref|XP_003556673.1| PREDICTED: cytochrome c6, chloroplastic-like...   271   1e-70
ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isof...   239   6e-61

>gb|AFK45176.1| unknown [Lotus japonicus]
          Length = 175

 Score =  290 bits (743), Expect = 2e-76
 Identities = 145/175 (82%), Positives = 154/175 (88%), Gaps = 1/175 (0%)
 Frame = +1

Query: 97  MKLASLISGCTDYTSLLSIKDKVKREENPNIPSRKTKEVKF-FKSLAPPLVAAFLTLSPI 273
           MKLA +IS  T Y  LLS+KD VKREE   IP RK KE+KF  KSLAPPLVAAFL LSPI
Sbjct: 1   MKLAGMISCSTYYNRLLSVKDSVKREEENPIPRRKAKELKFSLKSLAPPLVAAFLVLSPI 60

Query: 274 CGTPVSIGQTIDIQRGATLFRQTCIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEEIYRI 453
            GTPVS GQTIDIQRGATLFR+ CIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEE IYRI
Sbjct: 61  SGTPVSSGQTIDIQRGATLFRKACIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEAIYRI 120

Query: 454 TYYGKGRMPGFGKECMPRGQCTFGARLEDEEIKILAEFVKLQADKGWPSIETEEK 618
           +YYGK RMPGFGKECMPRGQCTFGARLEDE+IK+LAEFVKLQA+KGWPSIE +EK
Sbjct: 121 SYYGKERMPGFGKECMPRGQCTFGARLEDEDIKLLAEFVKLQANKGWPSIELQEK 175


>ref|XP_003607878.1| Cytochrome c6 [Medicago truncatula] gi|124359658|gb|ABN06030.1|
           Cytochrome c, monohaem [Medicago truncatula]
           gi|355508933|gb|AES90075.1| Cytochrome c6 [Medicago
           truncatula]
          Length = 173

 Score =  289 bits (739), Expect = 7e-76
 Identities = 144/176 (81%), Positives = 155/176 (88%), Gaps = 2/176 (1%)
 Frame = +1

Query: 97  MKLASLISGCTDYTSLLSIKDKVKREENPN--IPSRKTKEVKFFKSLAPPLVAAFLTLSP 270
           MKLA LISG   Y + +SIKD VKREE     IP++  ++VKFF +LAPPL AAFL  SP
Sbjct: 1   MKLACLISG---YNNPVSIKDNVKREEKHVNLIPTKTKQQVKFFNNLAPPLAAAFLLFSP 57

Query: 271 ICGTPVSIGQTIDIQRGATLFRQTCIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEEIYR 450
           IC TPVSI QTIDIQRGATLF QTCIGCHDAGGNIIQPGSTL+TKDLQRNGVDTEEEIYR
Sbjct: 58  ICATPVSIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYR 117

Query: 451 ITYYGKGRMPGFGKECMPRGQCTFGARLEDEEIKILAEFVKLQADKGWPSIETEEK 618
           +TYYGKGRMPGFGKECMPRGQCTFGARLEDE+IKILAEFVKLQADKGWPSIETE+K
Sbjct: 118 VTYYGKGRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETEQK 173


>gb|AFK42813.1| unknown [Medicago truncatula]
          Length = 173

 Score =  288 bits (737), Expect = 1e-75
 Identities = 144/176 (81%), Positives = 155/176 (88%), Gaps = 2/176 (1%)
 Frame = +1

Query: 97  MKLASLISGCTDYTSLLSIKDKVKREENPN--IPSRKTKEVKFFKSLAPPLVAAFLTLSP 270
           MKLA LISG   Y + +SIKD VKREE     IP++  ++VKFF +LAPPL AAFL  SP
Sbjct: 1   MKLACLISG---YNNPVSIKDNVKREEKHVNLIPTKTKQQVKFFNNLAPPLAAAFLLSSP 57

Query: 271 ICGTPVSIGQTIDIQRGATLFRQTCIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEEIYR 450
           IC TPVSI QTIDIQRGATLF QTCIGCHDAGGNIIQPGSTL+TKDLQRNGVDTEEEIYR
Sbjct: 58  ICATPVSIAQTIDIQRGATLFSQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIYR 117

Query: 451 ITYYGKGRMPGFGKECMPRGQCTFGARLEDEEIKILAEFVKLQADKGWPSIETEEK 618
           +TYYGKGRMPGFGKECMPRGQCTFGARLEDE+IKILAEFVKLQADKGWPSIETE+K
Sbjct: 118 VTYYGKGRMPGFGKECMPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIETEQK 173


>ref|XP_003556673.1| PREDICTED: cytochrome c6, chloroplastic-like [Glycine max]
          Length = 173

 Score =  271 bits (694), Expect = 1e-70
 Identities = 137/175 (78%), Positives = 149/175 (85%), Gaps = 1/175 (0%)
 Frame = +1

Query: 97  MKLASLISGCTDYTSLLSIKDKVKREENPNIPSRKTKEVKFFKSLAPPLVAAFLTLSPIC 276
           MK+ASLISGC DYT LLSIK+ V REE P IP+ +  EVKF KSL   LVAAFL LSPIC
Sbjct: 1   MKIASLISGCNDYTHLLSIKEHVMREEKP-IPTTRKSEVKFLKSLTR-LVAAFLVLSPIC 58

Query: 277 GTPVSIGQTIDIQRGATLFRQTCIGCHDAGGNIIQP-GSTLYTKDLQRNGVDTEEEIYRI 453
             PVS  QT+DIQRG TLFRQ CIGCHDAGGNIIQP  +TL+TKDLQRN VDTEE IYR+
Sbjct: 59  SIPVSSAQTVDIQRGTTLFRQACIGCHDAGGNIIQPVRATLFTKDLQRNEVDTEEAIYRV 118

Query: 454 TYYGKGRMPGFGKECMPRGQCTFGARLEDEEIKILAEFVKLQADKGWPSIETEEK 618
           TYYGK RMPGFGKECMPRGQCTFGARLEDE+IK LAEFVKLQAD+GWPSIET+E+
Sbjct: 119 TYYGKARMPGFGKECMPRGQCTFGARLEDEDIKTLAEFVKLQADQGWPSIETKEE 173


>ref|XP_003631239.1| PREDICTED: cytochrome c6, chloroplastic isoform 2 [Vitis vinifera]
           gi|297737964|emb|CBI27165.3| unnamed protein product
           [Vitis vinifera]
          Length = 173

 Score =  239 bits (610), Expect = 6e-61
 Identities = 115/170 (67%), Positives = 133/170 (78%)
 Frame = +1

Query: 97  MKLASLISGCTDYTSLLSIKDKVKREENPNIPSRKTKEVKFFKSLAPPLVAAFLTLSPIC 276
           M+L  L+  C      L +K  V  E        K K+VKF K LAPPL+AA + LSPIC
Sbjct: 1   MQLLCLMPTCRSMNYALPVKGMVG-ERGKTPVHEKQKQVKFLKGLAPPLMAAVVALSPIC 59

Query: 277 GTPVSIGQTIDIQRGATLFRQTCIGCHDAGGNIIQPGSTLYTKDLQRNGVDTEEEIYRIT 456
            TPVS+ QT DIQRGA LF + CIGCHDAGGNIIQPG+TL+ KDLQRNGVDTEEEIYR+T
Sbjct: 60  NTPVSLAQTTDIQRGAALFGRACIGCHDAGGNIIQPGATLFLKDLQRNGVDTEEEIYRVT 119

Query: 457 YYGKGRMPGFGKECMPRGQCTFGARLEDEEIKILAEFVKLQADKGWPSIE 606
           YYGKGRMPGFG+ C PRGQCTFGARL++EEIK+LAEFVKLQAD+GWP++E
Sbjct: 120 YYGKGRMPGFGENCTPRGQCTFGARLQEEEIKLLAEFVKLQADQGWPNLE 169


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