BLASTX nr result

ID: Glycyrrhiza23_contig00020272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020272
         (1596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding prote...   438   e-120
ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding prote...   436   e-120
gb|ACU19095.1| unknown [Glycine max]                                  431   e-118
ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula] ...   354   3e-95
ref|XP_002514055.1| conserved hypothetical protein [Ricinus comm...   272   2e-70

>ref|XP_003523789.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  438 bits (1126), Expect = e-120
 Identities = 244/359 (67%), Positives = 265/359 (73%), Gaps = 3/359 (0%)
 Frame = -2

Query: 1331 MPTNEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 1152
            MPTNEDFQ VSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS
Sbjct: 1    MPTNEDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 60

Query: 1151 LPGFFNRKAAEQSAAEVALVELAKSDEVNRSISQPVHETGLCKNLLQEYAQKMNYAMPMY 972
            LPGFFNRKAAEQSAAEVALVEL KS+ VN+SI+QPVHETGLCKNLLQEYAQKMNYAMPMY
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELVKSNAVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMY 120

Query: 971  HCKKDETPGRTPVFSCTVDIGGILYIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSENRF 792
             CKKDETPGR  VFSCTVDIGGILYIGG                           SEN+ 
Sbjct: 121  QCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHASENQV 180

Query: 791  GH--LTVIPCRKRATDSVAPADETTSNAPTXXXXXXXXXXXXXXXXXXKMGHVVHAENVG 618
            GH  LTV+PCRKRAT SVA ADE  SN P                   KMG  +H EN+G
Sbjct: 181  GHPQLTVLPCRKRATSSVAIADE-NSNPPKPKKARFKRKSSKRKPSRDKMGQ-IHTENLG 238

Query: 617  IGANINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAGEEGSL 438
            IG  INHEVE+ A VN ESG ++  K    F SEA  N ENG+SVN+QEKETLAG E S 
Sbjct: 239  IGEIINHEVETHASVNGESGLLE--KKTETFTSEATNNFENGVSVNYQEKETLAG-ESSF 295

Query: 437  ALNSQ-GVFENGKSTESHFEENNVGTVAATELSSVPNGDMPAMSTEMMNKQRCNGEMIS 264
            A+NSQ G+FENGKSTE + +ENN+GTV  TELSS  NG +P  S E +NKQ+CNGEM+S
Sbjct: 296  AVNSQEGIFENGKSTELYSKENNLGTV-VTELSSASNGGIPEPSVE-VNKQQCNGEMVS 352


>ref|XP_003526553.1| PREDICTED: double-stranded RNA-binding protein 1-like [Glycine max]
          Length = 359

 Score =  436 bits (1121), Expect = e-120
 Identities = 247/359 (68%), Positives = 270/359 (75%), Gaps = 3/359 (0%)
 Frame = -2

Query: 1331 MPTNEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 1152
            MPTNEDFQ VSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS
Sbjct: 1    MPTNEDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 60

Query: 1151 LPGFFNRKAAEQSAAEVALVELAKSDEVNRSISQPVHETGLCKNLLQEYAQKMNYAMPMY 972
            LPGFFNRKAAEQSAAEVALVEL KS+ VN+SI+QPVHETGLCKNLLQEYAQKMNYAMPMY
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMY 120

Query: 971  HCKKDETPGRTPVFSCTVDIGGILYIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSENRF 792
             CKKDETPGR  VFSCTVDIGGILYIGG                           S+++ 
Sbjct: 121  QCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQV 180

Query: 791  GH--LTVIPCRKRATDSVAPADETTSNAPTXXXXXXXXXXXXXXXXXXKMGHVVHAENVG 618
            GH  LTV+PCRKRAT+SVA ADE  SN P                   KMG  +H EN+G
Sbjct: 181  GHPQLTVLPCRKRATESVAIADE-NSNPPKPKKARFKRKSSKRKPSRDKMGQ-IHTENLG 238

Query: 617  IGANINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAGEEGSL 438
            IGANINHEVE+ A VN ES GV E KSE+ F SEA  N ENG+SVN+QEKETLAG E SL
Sbjct: 239  IGANINHEVETHASVNGES-GVLEKKSET-FTSEAANNFENGVSVNYQEKETLAG-ESSL 295

Query: 437  ALNSQ-GVFENGKSTESHFEENNVGTVAATELSSVPNGDMPAMSTEMMNKQRCNGEMIS 264
            A+NSQ G+FENGKSTE + +ENN+ TV  TELSSV NG +P    E +NKQ+ NGEM+S
Sbjct: 296  AVNSQEGIFENGKSTELYSKENNLVTV-VTELSSVSNGGIPETGVE-VNKQQYNGEMVS 352


>gb|ACU19095.1| unknown [Glycine max]
          Length = 359

 Score =  431 bits (1109), Expect = e-118
 Identities = 245/359 (68%), Positives = 268/359 (74%), Gaps = 3/359 (0%)
 Frame = -2

Query: 1331 MPTNEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 1152
            MPTNEDFQ VSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS
Sbjct: 1    MPTNEDFQSVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDS 60

Query: 1151 LPGFFNRKAAEQSAAEVALVELAKSDEVNRSISQPVHETGLCKNLLQEYAQKMNYAMPMY 972
            LPGFFNRKAAEQSAAEVALVEL KS+ VN+SI+QPVHETGLCKNLLQEYAQKMNYAMPMY
Sbjct: 61   LPGFFNRKAAEQSAAEVALVELIKSNLVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMY 120

Query: 971  HCKKDETPGRTPVFSCTVDIGGILYIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSENRF 792
             CKKDETPGR  VFSCTVDIGGILYIGG                           S+++ 
Sbjct: 121  QCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASQASQDQV 180

Query: 791  GH--LTVIPCRKRATDSVAPADETTSNAPTXXXXXXXXXXXXXXXXXXKMGHVVHAENVG 618
            GH  LTV+PCRKRAT+SVA ADE  SN P                   KMG  +H EN+G
Sbjct: 181  GHPQLTVLPCRKRATESVAIADE-NSNPPKPKKARFKRKSSKRKPSRDKMGQ-IHTENLG 238

Query: 617  IGANINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAGEEGSL 438
            IGANINHEVE+ A VN ES GV E KSE+ F SEA  N ENG+SVN+QEKETLAG E  L
Sbjct: 239  IGANINHEVETHASVNGES-GVLEKKSET-FTSEAANNFENGVSVNYQEKETLAG-ESFL 295

Query: 437  ALNSQ-GVFENGKSTESHFEENNVGTVAATELSSVPNGDMPAMSTEMMNKQRCNGEMIS 264
            A+NSQ G+FENGKSTE + +ENN+ TV  TEL SV NG +P    E +NKQ+ NGEM+S
Sbjct: 296  AVNSQEGIFENGKSTELYSKENNLVTV-VTELFSVSNGGIPETGVE-VNKQQYNGEMVS 352


>ref|XP_003602894.1| DsRNA-binding protein [Medicago truncatula]
            gi|355491942|gb|AES73145.1| DsRNA-binding protein
            [Medicago truncatula]
          Length = 780

 Score =  354 bits (909), Expect = 3e-95
 Identities = 199/341 (58%), Positives = 230/341 (67%), Gaps = 6/341 (1%)
 Frame = -2

Query: 1325 TNEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLP 1146
            TNEDFQGVSNCYVFKS+LQEYAQKAGL TPVYET KEGPSHEPSFRSTVI+NDVRYDSL 
Sbjct: 4    TNEDFQGVSNCYVFKSQLQEYAQKAGLGTPVYETTKEGPSHEPSFRSTVIMNDVRYDSLA 63

Query: 1145 GFFNRKAAEQSAAEVALVELAKSDEVNRSISQPVHETGLCKNLLQEYAQKMNYAMPMYHC 966
            GFFNRKAAEQSAAEVAL+ELAK+ EVN+SI+QPVHETGLCKNLLQEYAQKMNYAMP+Y  
Sbjct: 64   GFFNRKAAEQSAAEVALMELAKTGEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPLYQS 123

Query: 965  KKDET-PGRTPVFSCTVDIGGILYIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSENRFG 789
            KKD+T PGR P++SCTVDIGG+LYIGG                           SEN+FG
Sbjct: 124  KKDDTPPGRAPLYSCTVDIGGMLYIGGTAKTKREAEIKAARTALLAIQTNASQASENQFG 183

Query: 788  HLTVIPCRKRATDSVAPADETTSNAPTXXXXXXXXXXXXXXXXXXKMGHVVHAENVGIGA 609
            HLTVIP RKRAT+S+A   +  S AP                   K    ++A+N G  A
Sbjct: 184  HLTVIPSRKRATESIA---DEASKAPKSKKSRFKGKYSKKKPHRNKKRR-INADNAGDEA 239

Query: 608  NINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAG-----EEG 444
             I++  ES A  NDES G+QEIKSE+AF SE MKN ENG+S NH EKETLAG      E 
Sbjct: 240  KIDNGAESLASANDES-GLQEIKSEAAFPSEVMKNSENGVSSNHHEKETLAGLQEIKSEA 298

Query: 443  SLALNSQGVFENGKSTESHFEENNVGTVAATELSSVPNGDM 321
            +    +   ++NG ST  H +E   G       ++ P+  M
Sbjct: 299  AFPSEAMQYYDNGVSTNHHEKETLAGLQEVKSEAAFPSEAM 339



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 30/156 (19%)
 Frame = -2

Query: 638 VHAENVGIGANINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETL 459
           +++EN G+  N +HE E+ A        +QEIKSE+AF SEAM N EN +S NH E+E L
Sbjct: 515 MNSEN-GVSTN-HHEKETLA-------AIQEIKSEAAFLSEAMTNSENRVSTNHHEEEKL 565

Query: 458 AGEE------------------------------GSLALNSQGVFENGKSTESHFEENNV 369
           AG +                               S  LN+Q  FE+GK TE   +E N+
Sbjct: 566 AGVQEIKSEAAFLSEVMKNSGSDISTNLHEKEMYQSFVLNNQENFESGKLTELQSKEINI 625

Query: 368 GTVAATELSSVPNGDMPAMSTEMMNKQRCNGEMISG 261
           G V  TE+S  P G + AMS E MNKQ CNG+M+SG
Sbjct: 626 GNV-VTEVSFAPEGYILAMSVE-MNKQNCNGDMVSG 659



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
 Frame = -2

Query: 620 GIGANINHEVESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAGEEGS 441
           G+  N +HE E+ A       G+QE+KSE+AF SEAMKN ENG S N+ EKET AG +  
Sbjct: 311 GVSTN-HHEKETLA-------GLQEVKSEAAFPSEAMKNSENGASTNYHEKETSAGLQ-- 360

Query: 440 LALNSQGVF---------ENGKSTESHFEENNVGTVAATELSSVPNGDMPAMSTE 303
             + S+  F         ENG  T +H E+  +G +   +  +    D    ++E
Sbjct: 361 -EVKSEAAFPPDEAMQNSENGVPT-NHHEKETLGAIKEVKSEAAFPSDEAMQNSE 413



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 49/138 (35%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
 Frame = -2

Query: 641 VVHAENVGIGANINHEVESQARVNDESGGVQEIKSESAFQS-EAMKNCENGISVNHQEKE 465
           ++++EN G+  N +HE E+ A        +QEIKSE+AF S EA  N ENG+S NH EKE
Sbjct: 479 MMNSEN-GVSTN-HHEKETLA-------AIQEIKSEAAFPSDEATMNSENGVSTNHHEKE 529

Query: 464 TLAG-----EEGSLALNSQGVFENGKSTESHFEENNVGT----VAATELSSVPNGDMPAM 312
           TLA       E +    +    EN  ST  H EE   G       A  LS V       +
Sbjct: 530 TLAAIQEIKSEAAFLSEAMTNSENRVSTNHHEEEKLAGVQEIKSEAAFLSEVMKNSGSDI 589

Query: 311 STEMMNKQRCNGEMISGQ 258
           ST +  K+     +++ Q
Sbjct: 590 STNLHEKEMYQSFVLNNQ 607


>ref|XP_002514055.1| conserved hypothetical protein [Ricinus communis]
            gi|223547141|gb|EEF48638.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 361

 Score =  272 bits (695), Expect = 2e-70
 Identities = 164/334 (49%), Positives = 193/334 (57%), Gaps = 2/334 (0%)
 Frame = -2

Query: 1304 VSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFRSTVIVNDVRYDSLPGFFNRKA 1125
            VSNCYVFKSRLQEYAQK GLPTPVYETIKEGPSHEPSFRSTVIVND+RYDSLPGFFNRKA
Sbjct: 11   VSNCYVFKSRLQEYAQKKGLPTPVYETIKEGPSHEPSFRSTVIVNDIRYDSLPGFFNRKA 70

Query: 1124 AEQSAAEVALVELAKSDEVNRSISQPVHETGLCKNLLQEYAQKMNYAMPMYHCKKDETPG 945
            AEQSAAEVAL+ELAK DEVN SISQPVHETGLCKNLLQEYAQKMNYA+P+Y C+K+E+PG
Sbjct: 71   AEQSAAEVALMELAKCDEVNDSISQPVHETGLCKNLLQEYAQKMNYAIPLYLCQKNESPG 130

Query: 944  RTPVFSCTVDIGGILYIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXSENRFGH--LTVIP 771
            R  +F CTV+IGGI YIG                            S N  G+  LTVIP
Sbjct: 131  RGTLFKCTVEIGGIHYIGASAKTKKEAEIKAARTALLAIQLSASESSHNSIGNCQLTVIP 190

Query: 770  CRKRATDSVAPADETTSNAPTXXXXXXXXXXXXXXXXXXKMGHVVHAENVGIGANINHEV 591
             RKR  ++ A  +E   N P                       V H +   IG   + + 
Sbjct: 191  FRKRGAETAAVLEE-AMNVPKAKKARFRKKTLKKKHSG---NKVDHNQGETIGNKKDGQA 246

Query: 590  ESQARVNDESGGVQEIKSESAFQSEAMKNCENGISVNHQEKETLAGEEGSLALNSQGVFE 411
             S++  ND S  V +          +  N E+G  V    +       G+L  +  G F 
Sbjct: 247  GSESDKNDAS--VVQGTGHQLLPMLSTSNSEDGRLVPESSERETTDVTGALVCHISGDFG 304

Query: 410  NGKSTESHFEENNVGTVAATELSSVPNGDMPAMS 309
            NG +   +F+++N G  A T      NGD    S
Sbjct: 305  NGFAATVNFDQSNHGVCAET------NGDTAKFS 332


Top