BLASTX nr result

ID: Glycyrrhiza23_contig00020248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020248
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus ...   175   4e-42
ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   174   7e-42
ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   174   1e-41
ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   173   2e-41
ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   173   2e-41

>ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
           gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4,
           putative [Ricinus communis]
          Length = 263

 Score =  175 bits (444), Expect = 4e-42
 Identities = 87/111 (78%), Positives = 92/111 (82%)
 Frame = -3

Query: 582 TIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXXXXXXXXXXXXXXXVLKNREKHKGSF 403
           TIRYPDPLIKANDTIKLDLE NKITDFIKFD                 V+KNREKHKGSF
Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205

Query: 402 ETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRL 250
           ET+H+QDATGHEFATR+ NVFTIGKGTKPWVSLPKG+GIKLSIIEEARKRL
Sbjct: 206 ETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRL 256


>ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496881|ref|XP_004160252.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  174 bits (442), Expect = 7e-42
 Identities = 88/111 (79%), Positives = 91/111 (81%)
 Frame = -3

Query: 582 TIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXXXXXXXXXXXXXXXVLKNREKHKGSF 403
           TIRYPDPLIKANDTIKLDLE NKI DFIKFD                 V+KNREKHKGSF
Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205

Query: 402 ETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRL 250
           ET+HIQDATGHEFATRL NVFTIGKGTKPWVSLPKG+GIKLSIIEEARKRL
Sbjct: 206 ETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRL 256


>ref|XP_004150397.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496878|ref|XP_004160251.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  174 bits (441), Expect = 1e-41
 Identities = 87/111 (78%), Positives = 91/111 (81%)
 Frame = -3

Query: 582 TIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXXXXXXXXXXXXXXXVLKNREKHKGSF 403
           TIRYPDPLIKANDTIKLDLE NKI DFIKFD                 V+KNREKHKGSF
Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205

Query: 402 ETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRL 250
           ET+HIQDATGHEFATRL NVFT+GKGTKPWVSLPKG+GIKLSIIEEARKRL
Sbjct: 206 ETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKGKGIKLSIIEEARKRL 256


>ref|XP_004163526.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/111 (78%), Positives = 91/111 (81%)
 Frame = -3

Query: 582 TIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXXXXXXXXXXXXXXXVLKNREKHKGSF 403
           TIRYPDPLIKANDTIKLDLE NKI DFIKFD                 V+KNREKHKGSF
Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205

Query: 402 ETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRL 250
           ET+HIQDATGHEFATRL NVFTIGKGTKPWVSLPKG+GIKL+IIEEARKRL
Sbjct: 206 ETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRL 256


>ref|XP_004148191.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
          Length = 216

 Score =  173 bits (439), Expect = 2e-41
 Identities = 87/111 (78%), Positives = 91/111 (81%)
 Frame = -3

Query: 582 TIRYPDPLIKANDTIKLDLELNKITDFIKFDXXXXXXXXXXXXXXXXXVLKNREKHKGSF 403
           TIRYPDPLIKANDTIKLDLE NKI DFIKFD                 V+KNREKHKGSF
Sbjct: 98  TIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 157

Query: 402 ETVHIQDATGHEFATRLSNVFTIGKGTKPWVSLPKGRGIKLSIIEEARKRL 250
           ET+HIQDATGHEFATRL NVFTIGKGTKPWVSLPKG+GIKL+IIEEARKRL
Sbjct: 158 ETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEARKRL 208


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