BLASTX nr result

ID: Glycyrrhiza23_contig00020238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020238
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-co...   259   2e-67
ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-co...   211   4e-53
emb|CBI15155.3| unnamed protein product [Vitis vinifera]              211   4e-53
ref|XP_002514699.1| ATP binding protein, putative [Ricinus commu...   208   5e-52
ref|XP_002318592.1| chromatin remodeling complex subunit [Populu...   206   2e-51

>ref|XP_003528212.1| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Glycine max]
          Length = 1193

 Score =  259 bits (662), Expect = 2e-67
 Identities = 134/186 (72%), Positives = 144/186 (77%), Gaps = 6/186 (3%)
 Frame = -2

Query: 541  RPQPLYQNFRPEELELLSS-ADA-----DEKQNIESVCVKDNPAFRNALLDFANEWKSLR 380
            RPQPL++NFRPEELELLSS AD      DEKQ  E V VKDNPA+R+AL+ FA EWK+LR
Sbjct: 848  RPQPLHENFRPEELELLSSVADDEKQAHDEKQKTEFVTVKDNPAYRHALMAFAEEWKNLR 907

Query: 379  PIERXXXXXXXXXXXLAVELCYLIESXXXXXXXXXXXGSRRRMTPLMEISYPLPSDAVWR 200
             IER           LAVELCYL ES           GS+RR TPLMEISYPLPSDAVWR
Sbjct: 908  SIERRKLLGKPLQLPLAVELCYLSESNNHNNKGLLNGGSKRRRTPLMEISYPLPSDAVWR 967

Query: 199  KVYLRSGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNSKTPEFFEDLFCNLVCYEEYRM 20
            KV LRSGLGKKEKEYTQGWS+ DEPLCKLCQKQC+ NN+KTPEFFEDLFCNLVCYEEYRM
Sbjct: 968  KVSLRSGLGKKEKEYTQGWSVTDEPLCKLCQKQCLANNAKTPEFFEDLFCNLVCYEEYRM 1027

Query: 19   RTSKRF 2
            RTS RF
Sbjct: 1028 RTSNRF 1033


>ref|XP_002281382.2| PREDICTED: zinc finger Ran-binding domain-containing protein 3-like
            [Vitis vinifera]
          Length = 1280

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/180 (57%), Positives = 125/180 (69%)
 Frame = -2

Query: 544  ARPQPLYQNFRPEELELLSSADADEKQNIESVCVKDNPAFRNALLDFANEWKSLRPIERX 365
            +RP+PL++NFRPEEL+ L S   D  +    + VKDNPA+R+ LL F  EW +LRPIE+ 
Sbjct: 904  SRPRPLFENFRPEELDPLQSTGVDNSKKTTLIPVKDNPAYRDVLLAFVKEWNNLRPIEQK 963

Query: 364  XXXXXXXXXXLAVELCYLIESXXXXXXXXXXXGSRRRMTPLMEISYPLPSDAVWRKVYLR 185
                      L VELC L E            GS+RR TPL +ISYPLPS+AVW+KVYL 
Sbjct: 964  KLLQKPLQLPLTVELCCLSEGINHSSGGLLKRGSKRRTTPLGDISYPLPSNAVWKKVYLC 1023

Query: 184  SGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNSKTPEFFEDLFCNLVCYEEYRMRTSKR 5
            SG GK+ KEYTQGW+L DEPLCKLCQ  C  +N+KTP+FFEDLFC+L CYEEYR+RTS R
Sbjct: 1024 SGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAKTPDFFEDLFCSLGCYEEYRIRTSNR 1083


>emb|CBI15155.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score =  211 bits (538), Expect = 4e-53
 Identities = 103/180 (57%), Positives = 125/180 (69%)
 Frame = -2

Query: 544  ARPQPLYQNFRPEELELLSSADADEKQNIESVCVKDNPAFRNALLDFANEWKSLRPIERX 365
            +RP+PL++NFRPEEL+ L S   D  +    + VKDNPA+R+ LL F  EW +LRPIE+ 
Sbjct: 825  SRPRPLFENFRPEELDPLQSTGVDNSKKTTLIPVKDNPAYRDVLLAFVKEWNNLRPIEQK 884

Query: 364  XXXXXXXXXXLAVELCYLIESXXXXXXXXXXXGSRRRMTPLMEISYPLPSDAVWRKVYLR 185
                      L VELC L E            GS+RR TPL +ISYPLPS+AVW+KVYL 
Sbjct: 885  KLLQKPLQLPLTVELCCLSEGINHSSGGLLKRGSKRRTTPLGDISYPLPSNAVWKKVYLC 944

Query: 184  SGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNSKTPEFFEDLFCNLVCYEEYRMRTSKR 5
            SG GK+ KEYTQGW+L DEPLCKLCQ  C  +N+KTP+FFEDLFC+L CYEEYR+RTS R
Sbjct: 945  SGYGKRVKEYTQGWTLMDEPLCKLCQTPCKNSNAKTPDFFEDLFCSLGCYEEYRIRTSNR 1004


>ref|XP_002514699.1| ATP binding protein, putative [Ricinus communis]
            gi|223546303|gb|EEF47805.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1229

 Score =  208 bits (529), Expect = 5e-52
 Identities = 103/179 (57%), Positives = 121/179 (67%)
 Frame = -2

Query: 541  RPQPLYQNFRPEELELLSSADADEKQNIESVCVKDNPAFRNALLDFANEWKSLRPIERXX 362
            RPQPL++NFRPEE+E  +S  A+      +   K  P +R+ALL F  EW  LRPIER  
Sbjct: 871  RPQPLFENFRPEEIESFNSLVANNNNESATKPFKGIPPYRHALLAFIKEWNKLRPIERRK 930

Query: 361  XXXXXXXXXLAVELCYLIESXXXXXXXXXXXGSRRRMTPLMEISYPLPSDAVWRKVYLRS 182
                     L++ELCYL E+           GS+RRMTP  EISYPLPS AVW+ V L S
Sbjct: 931  LVGKTLQLPLSIELCYLNENINHSTEGLLKGGSKRRMTPWFEISYPLPSGAVWKNVNLSS 990

Query: 181  GLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNSKTPEFFEDLFCNLVCYEEYRMRTSKR 5
              GKKEK+YTQGW+L DEPLCKLCQ  C G+N+KTPEFFEDLFCNL CYEEYR+RTS R
Sbjct: 991  SYGKKEKQYTQGWTLMDEPLCKLCQTPCKGSNAKTPEFFEDLFCNLSCYEEYRIRTSSR 1049


>ref|XP_002318592.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222859265|gb|EEE96812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 726

 Score =  206 bits (523), Expect = 2e-51
 Identities = 101/180 (56%), Positives = 127/180 (70%)
 Frame = -2

Query: 544 ARPQPLYQNFRPEELELLSSADADEKQNIESVCVKDNPAFRNALLDFANEWKSLRPIERX 365
           +RPQPLY+NF+PEELE L+   A++ +  +   +K NP  R+ALL F  EW +LRPIER 
Sbjct: 369 SRPQPLYENFQPEELESLNLPAANDSKETDFKFLKGNPVSRHALLSFIKEWNALRPIERR 428

Query: 364 XXXXXXXXXXLAVELCYLIESXXXXXXXXXXXGSRRRMTPLMEISYPLPSDAVWRKVYLR 185
                     L VELCYL ES           GS+RR+TPL EIS+PLPS+A+ +KV+L 
Sbjct: 429 KLRGKTLQLPLRVELCYLNESTNHKIGGLLKGGSKRRLTPLGEISHPLPSNAILKKVHLS 488

Query: 184 SGLGKKEKEYTQGWSLNDEPLCKLCQKQCMGNNSKTPEFFEDLFCNLVCYEEYRMRTSKR 5
           S  G+KEK+YTQGW+L DEPLCKLCQ  C G+N+KTP +FEDLFCNL+C EEYR+RTS R
Sbjct: 489 SSYGQKEKQYTQGWTLMDEPLCKLCQMPCKGSNAKTPVYFEDLFCNLICCEEYRLRTSSR 548