BLASTX nr result

ID: Glycyrrhiza23_contig00020231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020231
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   114   6e-24
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   114   8e-24
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   113   2e-23
ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, ...   108   5e-22
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [...   108   5e-22

>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  114 bits (286), Expect = 6e-24
 Identities = 55/62 (88%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   PGISFTDSGRVLGEKWKKMSVEEKEPYEAKARADKIRYQDEISGYKNPQLMNIDSGNESD 182
           PGISFTD GRVLGEKWKK+S EEKEPYEAKAR DK RY DEISGYKNPQ MNIDSGNESD
Sbjct: 553 PGISFTDVGRVLGEKWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQPMNIDSGNESD 612

Query: 183 SA 188
           SA
Sbjct: 613 SA 614


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/62 (88%), Positives = 57/62 (91%)
 Frame = +3

Query: 3   PGISFTDSGRVLGEKWKKMSVEEKEPYEAKARADKIRYQDEISGYKNPQLMNIDSGNESD 182
           PGISFTD  RVLGEKWKK+SVEEKEPYEAKAR DK RY+DEISGYKNPQ MNIDSGNESD
Sbjct: 579 PGISFTDVSRVLGEKWKKLSVEEKEPYEAKAREDKKRYKDEISGYKNPQPMNIDSGNESD 638

Query: 183 SA 188
           SA
Sbjct: 639 SA 640


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +3

Query: 3   PGISFTDSGRVLGEKWKKMSVEEKEPYEAKARADKIRYQDEISGYKNPQLMNIDSGNESD 182
           PGISFTD GRVLGEKWK +S EEKEPYEAKA+ADK RY+DEISGYKNPQ MN+DSGNESD
Sbjct: 581 PGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESD 640

Query: 183 SA 188
           SA
Sbjct: 641 SA 642


>ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 303

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   PGISFTDSGRVLGEKWKKMSVEEKEPYEAKARADKIRYQDEISGYKNPQLMNIDSGNESD 182
           PGISFT+ GRVLG+KW KMS EEKEPYE+KAR DK RY++EISGYKNPQ MNIDSGNESD
Sbjct: 242 PGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESD 301

Query: 183 SA 188
           SA
Sbjct: 302 SA 303


>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
          Length = 642

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/62 (82%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   PGISFTDSGRVLGEKWKKMSVEEKEPYEAKARADKIRYQDEISGYKNPQLMNIDSGNESD 182
           PGISFT+ GRVLG+KW KMS EEKEPYE+KAR DK RY++EISGYKNPQ MNIDSGNESD
Sbjct: 581 PGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESD 640

Query: 183 SA 188
           SA
Sbjct: 641 SA 642