BLASTX nr result

ID: Glycyrrhiza23_contig00020219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020219
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539117.1| PREDICTED: transcription regulatory protein ...   251   1e-64
ref|XP_003610678.1| Chromatin remodeling complex subunit [Medica...   249   4e-64
ref|XP_003555334.1| PREDICTED: transcription regulatory protein ...   229   7e-58
emb|CBI26213.3| unnamed protein product [Vitis vinifera]              226   4e-57
ref|XP_003535660.1| PREDICTED: transcription regulatory protein ...   223   4e-56

>ref|XP_003539117.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1063

 Score =  251 bits (641), Expect = 1e-64
 Identities = 133/201 (66%), Positives = 154/201 (76%)
 Frame = -3

Query: 650 ALIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVXXXXXXXXXXXSTQEGLLADLQD 471
           +LIGALNLVSRNLPLPP+LF+TVSSIYH S+  PL             + ++ LLADLQ+
Sbjct: 6   SLIGALNLVSRNLPLPPDLFDTVSSIYHRSN--PLS--------SEADAPEQDLLADLQN 55

Query: 470 ALSKQRPNCASSFKLNKAMESRYQSQIRHRLTELEGFPSSRGEDLQTRCXXXXXXXXXXX 291
           AL +QRPN AS+ KLNK  ESRY +QIRHRLT+L+G PSSRGEDLQT C           
Sbjct: 56  ALLEQRPNYASASKLNKTRESRYHTQIRHRLTQLQGLPSSRGEDLQTMCLLELYGLKLAE 115

Query: 290 LQRKVRTDVSSEYWLNVICAYPDKQLFDWGMMRLQRPPYGVGDPFSMNADDQIRKKRDAE 111
           LQRKV+TDV+SEYWLNV CAYPD+QLFDW MMRL+RP YGVGDPFSM+ADDQIRKKRDAE
Sbjct: 116 LQRKVQTDVNSEYWLNVKCAYPDRQLFDWSMMRLRRPLYGVGDPFSMDADDQIRKKRDAE 175

Query: 110 RLSRLEEQAKKSRRDQ*KKIF 48
           RLSRLEEQAK     + ++ F
Sbjct: 176 RLSRLEEQAKNHMETRKRRFF 196


>ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355512013|gb|AES93636.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1063

 Score =  249 bits (637), Expect = 4e-64
 Identities = 128/203 (63%), Positives = 156/203 (76%)
 Frame = -3

Query: 656 QQALIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVXXXXXXXXXXXSTQEGLLADL 477
           +QALIGALNLVSR+LPLPPELFNTVSSI +GSD+KPL +              + LL +L
Sbjct: 2   EQALIGALNLVSRDLPLPPELFNTVSSICYGSDSKPLSLNAEQD--------DDSLLTEL 53

Query: 476 QDALSKQRPNCASSFKLNKAMESRYQSQIRHRLTELEGFPSSRGEDLQTRCXXXXXXXXX 297
           QDA+SKQRPNC+SS KLN AM+ R Q++ ++RLT+LEG   + G++LQT+C         
Sbjct: 54  QDAISKQRPNCSSSSKLNNAMKVRTQARFQNRLTQLEGLRWNWGDNLQTKCLLELYGLKL 113

Query: 296 XXLQRKVRTDVSSEYWLNVICAYPDKQLFDWGMMRLQRPPYGVGDPFSMNADDQIRKKRD 117
             LQ KVRT+VSSEYWLNV CAYPDKQLFDWGMMRL+RPPYG+GDPF+M+ADDQIRKKRD
Sbjct: 114 AELQGKVRTEVSSEYWLNVNCAYPDKQLFDWGMMRLRRPPYGIGDPFAMDADDQIRKKRD 173

Query: 116 AERLSRLEEQAKKSRRDQ*KKIF 48
           AERLSR+EEQAK     + ++ F
Sbjct: 174 AERLSRIEEQAKGQIETRTRRFF 196


>ref|XP_003555334.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1073

 Score =  229 bits (583), Expect = 7e-58
 Identities = 116/202 (57%), Positives = 144/202 (71%)
 Frame = -3

Query: 653 QALIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVXXXXXXXXXXXSTQEGLLADLQ 474
           + LI ALNL+SR+LPLPP + N+VSSIY                      ++E L+ DL+
Sbjct: 10  KTLICALNLLSRDLPLPPHILNSVSSIYRNKH-------------GDGGISREDLMTDLE 56

Query: 473 DALSKQRPNCASSFKLNKAMESRYQSQIRHRLTELEGFPSSRGEDLQTRCXXXXXXXXXX 294
           DALSKQRPNC S FKL +A ++RY+SQ++HRL EL+  PSSRGEDLQT+C          
Sbjct: 57  DALSKQRPNCVSGFKLEQARDNRYRSQVQHRLNELQELPSSRGEDLQTKCLLELYGLKLA 116

Query: 293 XLQRKVRTDVSSEYWLNVICAYPDKQLFDWGMMRLQRPPYGVGDPFSMNADDQIRKKRDA 114
            LQ KVR+DVSSEYWLN  CAYPD+QLFDWGMMRL+RP YGVGDPF+++ADDQ+RKKR+A
Sbjct: 117 ELQMKVRSDVSSEYWLNAKCAYPDRQLFDWGMMRLRRPLYGVGDPFAVDADDQLRKKREA 176

Query: 113 ERLSRLEEQAKKSRRDQ*KKIF 48
           ERLSRLEE+ K     + +K F
Sbjct: 177 ERLSRLEEKEKNHIETRTRKFF 198


>emb|CBI26213.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  226 bits (576), Expect = 4e-57
 Identities = 120/208 (57%), Positives = 140/208 (67%), Gaps = 6/208 (2%)
 Frame = -3

Query: 653 QALIGALNLVSRNLPLPPELFNTVSSIYHG------SDTKPLPVXXXXXXXXXXXSTQEG 492
           + LI ALNL+SRNLPLPP++FN VSSIYH       +D   L             S    
Sbjct: 18  KTLICALNLISRNLPLPPDVFNAVSSIYHADDLLDRADVDTLDTPSEKVSDGPGISGGGD 77

Query: 491 LLADLQDALSKQRPNCASSFKLNKAMESRYQSQIRHRLTELEGFPSSRGEDLQTRCXXXX 312
           L+ DL DAL KQRPNC S  +L K+ E+R QS I+HRLT+LE  PS+RGEDLQT+C    
Sbjct: 78  LIIDLDDALVKQRPNCTSGIELTKSRENRLQSHIQHRLTQLEELPSTRGEDLQTKCLLEL 137

Query: 311 XXXXXXXLQRKVRTDVSSEYWLNVICAYPDKQLFDWGMMRLQRPPYGVGDPFSMNADDQI 132
                  LQ KVR+DVSSEYWL + CAYPDKQLFDWGMMRL+RP YGVGD F+M ADDQ 
Sbjct: 138 YGLKLVELQSKVRSDVSSEYWLRMNCAYPDKQLFDWGMMRLRRPLYGVGDAFAMEADDQF 197

Query: 131 RKKRDAERLSRLEEQAKKSRRDQ*KKIF 48
           RKKRDAERLSRLEE+ K     + +K F
Sbjct: 198 RKKRDAERLSRLEEEEKNRLETRKRKFF 225


>ref|XP_003535660.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
          Length = 1072

 Score =  223 bits (568), Expect = 4e-56
 Identities = 114/202 (56%), Positives = 143/202 (70%)
 Frame = -3

Query: 653 QALIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVXXXXXXXXXXXSTQEGLLADLQ 474
           + LI ALNL+SR+LPLPP + N+VSSIY  +                  ++ E L+ DL+
Sbjct: 8   KTLICALNLLSRDLPLPPHILNSVSSIYRNNH-------------GDGGNSGEDLMTDLE 54

Query: 473 DALSKQRPNCASSFKLNKAMESRYQSQIRHRLTELEGFPSSRGEDLQTRCXXXXXXXXXX 294
           DALSKQRPNC   FKL ++ ++RY+S I+HRL EL+  PSSRGEDLQT+C          
Sbjct: 55  DALSKQRPNCVPGFKLEQSRDNRYRSLIQHRLNELQELPSSRGEDLQTKCLLELYGLKLA 114

Query: 293 XLQRKVRTDVSSEYWLNVICAYPDKQLFDWGMMRLQRPPYGVGDPFSMNADDQIRKKRDA 114
            LQ KVR+DVSSEYWLN  CAYPD+QLFDWGMMRL+RP YGVGDPF+M+ADDQ++KKR+A
Sbjct: 115 ELQMKVRSDVSSEYWLNAKCAYPDRQLFDWGMMRLRRPLYGVGDPFAMDADDQLKKKREA 174

Query: 113 ERLSRLEEQAKKSRRDQ*KKIF 48
           ERLSRLEE+ K     + +K F
Sbjct: 175 ERLSRLEEKEKNHIETRTRKFF 196


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