BLASTX nr result

ID: Glycyrrhiza23_contig00020157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020157
         (1471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615614.1| RNA binding domain protein [Medicago truncat...   533   e-149
ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containin...   449   e-123
ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containin...   358   2e-96
ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containin...   350   7e-94
ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246...   342   1e-91

>ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
            gi|355516949|gb|AES98572.1| RNA binding domain protein
            [Medicago truncatula]
          Length = 393

 Score =  533 bits (1373), Expect = e-149
 Identities = 278/395 (70%), Positives = 306/395 (77%), Gaps = 1/395 (0%)
 Frame = -2

Query: 1431 MNPLTLVKRIQKINSKEAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 1252
            MNPLTLVKRIQ+INS+EAAL I E ASWHTKYKDSAYVFVGGIPFD TEGD++AVFAQYG
Sbjct: 1    MNPLTLVKRIQQINSREAALNISEDASWHTKYKDSAYVFVGGIPFDFTEGDVIAVFAQYG 60

Query: 1251 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQILGRIIRVDHVXXXXXXXX 1072
            EVVD+NLVRDKGTGKSKGFAF+AYEDQRSTNLAVDNLNGAQ+ GRIIRVDHV        
Sbjct: 61   EVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNLNGAQVSGRIIRVDHVDKYKKMEE 120

Query: 1071 XXXXXXXXXXEARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGHEN-DKWDNDKFEGR 895
                      EARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWG     K DNDK++G 
Sbjct: 121  EDEEEAKQKREARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGDNGIAKGDNDKYDGP 180

Query: 894  KKERKYGNSQSNRIPETRDRDSHSRAHDNEMGLDNQSKRSDRKEEKMSQRHDDDDKFEGR 715
            KKER+YGN+Q +RIPETRDRDS SRAH N M LDN SKRSDR+EEKM +R D D  F GR
Sbjct: 181  KKERRYGNNQPDRIPETRDRDSRSRAHGNGMELDNPSKRSDRREEKMLRRQDGDGNFVGR 240

Query: 714  ENNSRREEKKPRRHEDDEFDHRSREDRYGREEKRSRRNSYDDMEPETXXXXXXXXXRSIK 535
            EN SRREEK+PR ++DDEF+   REDR+ REEKRS RN YDD EPE          RSIK
Sbjct: 241  ENTSRREEKRPRDYKDDEFEQWPREDRHRREEKRS-RNGYDDREPE-PRDHKREDRRSIK 298

Query: 534  PDDIEFEXXXXXXXXXXXXXXXRQDDNDFRSRSRETHSNREDRRSRKHTADESAPRSRED 355
             DD++FE               R+D +DF S+SRET  +RE+RRSRKHT DES PRSRED
Sbjct: 299  QDDVKFEPKSRDSDLREDKRPSRRDVDDFGSKSRETQGSREERRSRKHTDDESMPRSRED 358

Query: 354  YDRKQDNRSYRNDTDRSESKIRSDFDRREEKRSGR 250
            +DRKQDNRSY  D DRSESK R+D DRREEKRS R
Sbjct: 359  HDRKQDNRSYHKDADRSESKGRNDSDRREEKRSRR 393


>ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
            [Glycine max]
          Length = 354

 Score =  449 bits (1154), Expect = e-123
 Identities = 248/392 (63%), Positives = 273/392 (69%), Gaps = 4/392 (1%)
 Frame = -2

Query: 1431 MNPLTLVKRIQKINSKEAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 1252
            MNPLTLVKR Q IN++EAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG
Sbjct: 1    MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60

Query: 1251 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQILGRIIRVDHVXXXXXXXX 1072
            EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQ+LGRIIRVDHV        
Sbjct: 61   EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120

Query: 1071 XXXXXXXXXXEARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGHENDK--WDNDKFEG 898
                      EARGVCRAFQRGECTRGA CKFSHDEQRAANTGWG E DK  W +DKF+G
Sbjct: 121  EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFDG 180

Query: 897  RKKERKYGNSQSNRIPETRDRDSHSRAHDNEMGLDNQSKRSDRKEEKMSQRHDDDDKFEG 718
             KKER+ GN+QSN I ETRDRDS SRA +N+  LDNQ KRSDRKE               
Sbjct: 181  PKKERRSGNNQSNHIAETRDRDSFSRARNNDAELDNQPKRSDRKE------------MTK 228

Query: 717  RENNSRREEKKPRRHEDDEFDHRSRE--DRYGREEKRSRRNSYDDMEPETXXXXXXXXXR 544
            RE   +REEK  RR   D++D    E  D + REEKR                       
Sbjct: 229  REYRYKREEKGSRR---DDYDGMKLEPKDHHLREEKR----------------------- 262

Query: 543  SIKPDDIEFEXXXXXXXXXXXXXXXRQDDNDFRSRSRETHSNREDRRSRKHTADESAPRS 364
            SIKPDD+E E               R+D++D  S+SRE H   EDR+SRKH+  ESAP+ 
Sbjct: 263  SIKPDDVEVEPKSRDSDIREDKRSRRRDNDDIVSKSREPHGYSEDRKSRKHSEGESAPKP 322

Query: 363  REDYDRKQDNRSYRNDTDRSESKIRSDFDRRE 268
            REDYDRKQD RSYRN ++++ESK R  FDRRE
Sbjct: 323  REDYDRKQDKRSYRNYSNQTESKERYAFDRRE 354


>ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
            [Glycine max]
          Length = 235

 Score =  358 bits (920), Expect = 2e-96
 Identities = 181/230 (78%), Positives = 192/230 (83%), Gaps = 2/230 (0%)
 Frame = -2

Query: 1431 MNPLTLVKRIQKINSKEAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 1252
            MNPLTLVKR Q IN++EAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG
Sbjct: 1    MNPLTLVKRTQNINAREAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 60

Query: 1251 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQILGRIIRVDHVXXXXXXXX 1072
            EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQ+LGRIIRVDHV        
Sbjct: 61   EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQVLGRIIRVDHVDKYKKKEE 120

Query: 1071 XXXXXXXXXXEARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGHEND--KWDNDKFEG 898
                      EARGVCRAFQRGECTRGA CKFSHDEQRAANTGWG E D  KW +DKFEG
Sbjct: 121  EDEETERQKREARGVCRAFQRGECTRGASCKFSHDEQRAANTGWGREEDKPKWGHDKFEG 180

Query: 897  RKKERKYGNSQSNRIPETRDRDSHSRAHDNEMGLDNQSKRSDRKEEKMSQ 748
             KKER+ GN+QSN IPETRDRDS +RA + +  LDNQ K+SDR+E K  Q
Sbjct: 181  PKKERRSGNNQSNHIPETRDRDSRTRARNFDAELDNQPKKSDRRETKRRQ 230


>ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
            [Cucumis sativus]
          Length = 395

 Score =  350 bits (897), Expect = 7e-94
 Identities = 209/421 (49%), Positives = 259/421 (61%), Gaps = 5/421 (1%)
 Frame = -2

Query: 1431 MNPLTLVKRIQKINSKEAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 1252
            MNPLTLVKRIQKINS+EAALGI E+ASWH KYKDSAYVFVGGIP+DLTEGDLLAVFAQYG
Sbjct: 1    MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 1251 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQILGRIIRVDHVXXXXXXXX 1072
            E+VDVNL+RDKGTGKSKG+AF+AYEDQRSTNLAVDNLNGAQILGRI+RVDHV        
Sbjct: 61   EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 1071 XXXXXXXXXXEARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGHEND---KWDNDKFE 901
                      EARGVCRAFQRGECTRGAGCKFSHDEQRAA+TGWG   D   KW +DKF+
Sbjct: 121  EDEEEEQKKREARGVCRAFQRGECTRGAGCKFSHDEQRAADTGWGAAEDASSKWGHDKFD 180

Query: 900  GRKKERKYGNSQSNRIPETRDRDSHSRAHDNEMGLDNQSKRSDRKEEKMSQRHDDDDKFE 721
             RK   K  +++  +  +   R  H R     +  +N+ +  D  +E          + +
Sbjct: 181  SRKNHDKELHAKGRKTSDNLGR--HPRETSGSLRQENRPRGWDDSKE---------SELK 229

Query: 720  GRENNSRREEKKPRRHE-DDEFDHRSREDRYGREEKRSRRNSYDDMEPETXXXXXXXXXR 544
             RE++  ++EK+ RR++ D   D +S +D+Y  EEKRS RN  D+ + E          R
Sbjct: 230  SREDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRSSRNHDDNRKDE---------KR 280

Query: 543  SIKPDDIEFEXXXXXXXXXXXXXXXRQDDNDFRSRSRETHSNR-EDRRSRKHTADESAPR 367
            S K D+ +                 R  DN+    SR  +  R EDR S++H   E  P+
Sbjct: 281  SRKHDNDDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDKEYPPK 340

Query: 366  SREDYDRKQDNRSYRNDTDRSESKIRSDFDRREEKRSGR**QYLRSGEYASHSSSIMEKN 187
             RED  R++ + S R+   RSES  R + D + + RS         G   S S S  E+N
Sbjct: 341  LREDDKRRERDVSVRH---RSESYRRENPDEKRDYRSSH-------GGRDSSSHSHRERN 390

Query: 186  E 184
            E
Sbjct: 391  E 391


>ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
          Length = 429

 Score =  342 bits (877), Expect = 1e-91
 Identities = 212/442 (47%), Positives = 261/442 (59%), Gaps = 35/442 (7%)
 Frame = -2

Query: 1431 MNPLTLVKRIQKINSKEAALGIGEQASWHTKYKDSAYVFVGGIPFDLTEGDLLAVFAQYG 1252
            MNPLTLVKRIQKINS+EAALGI E ASWH KYK+SAYVFVGGIPFDLTEGDLLAVF+QYG
Sbjct: 1    MNPLTLVKRIQKINSQEAALGISESASWHAKYKESAYVFVGGIPFDLTEGDLLAVFSQYG 60

Query: 1251 EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNLAVDNLNGAQILGRIIRVDHVXXXXXXXX 1072
            E+VDVNLVRDKGTGKSKGFAF+AYEDQRSTNLAVDNLNGAQILGRIIRVDHV        
Sbjct: 61   EIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSNYKKKEE 120

Query: 1071 XXXXXXXXXXEARGVCRAFQRGECTRGAGCKFSHDEQRAANTGWGHEN--DKWDNDKFEG 898
                      EARGVCRAFQRGEC RGAGCKFSHDEQRA+NTGWG E+   +W +DKF+G
Sbjct: 121  EDEETERQKREARGVCRAFQRGECNRGAGCKFSHDEQRASNTGWGSEDKSSRWGHDKFQG 180

Query: 897  RKKERKYGNS-QSNRIPETRDRDSH---------SRAHDNEMGLDNQSKRSD-------- 772
              K     NS  +NR+ E    + H         SR   +E G ++  +RS+        
Sbjct: 181  STKSDGRPNSIPTNRVHEPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQDG 240

Query: 771  --------RKEEKMSQRHDDDDKFEGREN---NSRREEKKPRRHEDDEF---DHRSREDR 634
                    +KE++++ + D D +   R +   +S   E   RR ED +    + RSR   
Sbjct: 241  RGLERQMEQKEKELNYKEDQDRRTTERRSGRPDSNPGEDHDRRGEDQDIRATERRSRRHD 300

Query: 633  YGREEKRSRRNSYDDMEPETXXXXXXXXXRSIKPDDIEFEXXXXXXXXXXXXXXXRQDDN 454
                E   RR    D+              + + DD + E                   +
Sbjct: 301  SNPSEDHDRRGEDQDIRATERRSRRHDFESNPREDDRKEEDRDRRATERRSRR------S 354

Query: 453  DFRSRSRETHSNREDRRSRKHTADESAPRSREDYDRKQDNRSYRNDTDRSESKIRSD-FD 277
            +F S  RE H  RE++RSR+H   ES P+  ED+DR+++ +S R++   SES +R D  D
Sbjct: 355  EFESNPREDHDRREEKRSRRHEL-ESKPK--EDHDRREEKQSRRHE---SESYLREDPRD 408

Query: 276  RREEKRSGR**QYLRSGEYASH 211
             R +KRSG       S + ASH
Sbjct: 409  ERGDKRSG------HSRDTASH 424


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