BLASTX nr result

ID: Glycyrrhiza23_contig00020124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020124
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycin...   490   e-136
ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Gl...   486   e-135
gb|AFK36510.1| unknown [Lotus japonicus]                              467   e-129
ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cu...   436   e-120
ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus ...   431   e-118

>ref|NP_001242456.1| uncharacterized protein LOC100804238 [Glycine max]
            gi|255635327|gb|ACU18017.1| unknown [Glycine max]
          Length = 312

 Score =  490 bits (1262), Expect = e-136
 Identities = 253/316 (80%), Positives = 273/316 (86%), Gaps = 1/316 (0%)
 Frame = -1

Query: 1186 MAALISKXXXXXXXXXXXXXXHC-FDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLL 1010
            MAALISK               C FDSP AGFAS YK  D+CSSLSGE ++ A R    L
Sbjct: 1    MAALISKRILRCSSWSLHSLGRCYFDSPSAGFASIYKPRDVCSSLSGERMLPADRS---L 57

Query: 1009 AGSMIQRFSTSILTLGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFM 830
              SM+++FSTSILT G D+ AFPSDLLS K LAT+ERT+GLCQDLLIPVTNF NEDKG+M
Sbjct: 58   VRSMVRQFSTSILTPGADDSAFPSDLLSKKTLATSERTIGLCQDLLIPVTNFHNEDKGYM 117

Query: 829  VLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGT 650
            V  GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKT+SEVSGTG+KPWNQKG+GRARHG+
Sbjct: 118  VFPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGS 177

Query: 649  LRGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTK 470
            LRGPQFRGGAT HGPKPRSHAFK+NKKVR LGLKIALSARAAEGKLLVFEDLEVPTHKTK
Sbjct: 178  LRGPQFRGGATMHGPKPRSHAFKVNKKVRCLGLKIALSARAAEGKLLVFEDLEVPTHKTK 237

Query: 469  NIVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR 290
            NIVNY+ QMEDTKKLLLVDG+ I+EKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSR
Sbjct: 238  NIVNYYNQMEDTKKLLLVDGT-IDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSR 296

Query: 289  DAVTRIVERMRTPINR 242
             AVT+IVERM TPINR
Sbjct: 297  AAVTKIVERMHTPINR 312


>ref|XP_003534682.1| PREDICTED: 50S ribosomal protein L4-like [Glycine max]
          Length = 310

 Score =  486 bits (1250), Expect = e-135
 Identities = 252/316 (79%), Positives = 272/316 (86%), Gaps = 1/316 (0%)
 Frame = -1

Query: 1186 MAALISKXXXXXXXXXXXXXXHC-FDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLL 1010
            MAALISK               C FDSP  GFAS YK  D+C  LSGE + SA R    L
Sbjct: 1    MAALISKRILRCSSGSLHSLGRCYFDSP--GFASIYKPRDVCGGLSGERMFSADRS---L 55

Query: 1009 AGSMIQRFSTSILTLGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFM 830
             GSM+++FSTSILT G D+ AFPSDLLS K LAT+ERT+GLCQDLLIPVTNF NEDKG+M
Sbjct: 56   VGSMVRQFSTSILTPGDDDSAFPSDLLSKKILATSERTIGLCQDLLIPVTNFHNEDKGYM 115

Query: 829  VLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGT 650
            VL GDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKT+SEVSGTG+KPWNQKG+GRARHG+
Sbjct: 116  VLPGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGS 175

Query: 649  LRGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTK 470
            LRGPQFRGGAT HGPKPRSHAFK+NKKVRRLGLKIALSARAAEGKLLVFEDL VPTHKTK
Sbjct: 176  LRGPQFRGGATMHGPKPRSHAFKVNKKVRRLGLKIALSARAAEGKLLVFEDLAVPTHKTK 235

Query: 469  NIVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR 290
            NIVNY+ QMEDTKKLLLVDG+ I+EKLKL+TQNLHYVNVLPSIGLNVYSILLHDTLVMSR
Sbjct: 236  NIVNYYNQMEDTKKLLLVDGA-IDEKLKLSTQNLHYVNVLPSIGLNVYSILLHDTLVMSR 294

Query: 289  DAVTRIVERMRTPINR 242
             AV++IVERM TPINR
Sbjct: 295  AAVSKIVERMHTPINR 310


>gb|AFK36510.1| unknown [Lotus japonicus]
          Length = 305

 Score =  467 bits (1202), Expect = e-129
 Identities = 245/315 (77%), Positives = 261/315 (82%)
 Frame = -1

Query: 1186 MAALISKXXXXXXXXXXXXXXHCFDSPYAGFASFYKSHDICSSLSGESLISAQRPGLLLA 1007
            MAALISK               CF          ++S DICSSLSGE   SAQRPGLLLA
Sbjct: 1    MAALISKRLLRSSESLHSLGRRCF----------HQSRDICSSLSGERRFSAQRPGLLLA 50

Query: 1006 GSMIQRFSTSILTLGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFMV 827
             SMIQRF TS+   G  EGAFPSDLLS KPLAT+ER +GLCQDLLIPVTNF NEDKG MV
Sbjct: 51   RSMIQRFCTSVSVPGYHEGAFPSDLLSNKPLATSERDIGLCQDLLIPVTNFHNEDKGLMV 110

Query: 826  LAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGTL 647
            LAGDVFD+PIRKDIIHRVVRWQLA+RQQGTHSTKTVSEV GTG+K + QKG G+ARHG+ 
Sbjct: 111  LAGDVFDVPIRKDIIHRVVRWQLARRQQGTHSTKTVSEVRGTGRKMYKQKGLGKARHGSQ 170

Query: 646  RGPQFRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKN 467
            R   FRGGA  HGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDL+V THKTKN
Sbjct: 171  RVHLFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLDVLTHKTKN 230

Query: 466  IVNYFQQMEDTKKLLLVDGSPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 287
            IVNYF+QMED+KKLLLVDG PINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD
Sbjct: 231  IVNYFKQMEDSKKLLLVDGGPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 290

Query: 286  AVTRIVERMRTPINR 242
            AV +IVERM TPI+R
Sbjct: 291  AVNKIVERMHTPISR 305


>ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
            gi|449531047|ref|XP_004172499.1| PREDICTED: 50S ribosomal
            protein L4-like [Cucumis sativus]
          Length = 315

 Score =  436 bits (1122), Expect = e-120
 Identities = 223/285 (78%), Positives = 243/285 (85%), Gaps = 2/285 (0%)
 Frame = -1

Query: 1090 SFYKSHDICSSLSGESLISAQRPGLLLAGSMI--QRFSTSILTLGPDEGAFPSDLLSTKP 917
            SF   H+I   +SG S   A R  LL AGS +  + F TSILT      AFPS+LLS KP
Sbjct: 31   SFSNPHEIYGHVSGSSSTFASRSTLLKAGSFLASRGFCTSILTPESSNNAFPSELLSAKP 90

Query: 916  LATAERTLGLCQDLLIPVTNFRNEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT 737
            +A+ ER +GL QDL+IPVTNF NEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT
Sbjct: 91   VASEERKIGLYQDLMIPVTNFENEDKGFMVLAGDVFDLPIRKDIIHRVVRWQLAKRQQGT 150

Query: 736  HSTKTVSEVSGTGKKPWNQKGSGRARHGTLRGPQFRGGATKHGPKPRSHAFKLNKKVRRL 557
            HSTKT+SEVSGTG+KPW QKG+GRARHGTLRGPQFRGGAT HGPKPRSHAFKLNKKVRRL
Sbjct: 151  HSTKTISEVSGTGRKPWKQKGTGRARHGTLRGPQFRGGATMHGPKPRSHAFKLNKKVRRL 210

Query: 556  GLKIALSARAAEGKLLVFEDLEVPTHKTKNIVNYFQQMEDTKKLLLVDGSPINEKLKLAT 377
            GL IALSAR AEGKLLVF++L+V THKTKN+V Y  +ME+TKK+LLVDG PI+EKLKLAT
Sbjct: 211  GLMIALSARVAEGKLLVFDNLDVTTHKTKNMVKYVSKMENTKKVLLVDGGPIDEKLKLAT 270

Query: 376  QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVTRIVERMRTPINR 242
            QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV RIV RM TPINR
Sbjct: 271  QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRMHTPINR 315


>ref|XP_002518422.1| 50S ribosomal protein L4, putative [Ricinus communis]
           gi|223542267|gb|EEF43809.1| 50S ribosomal protein L4,
           putative [Ricinus communis]
          Length = 294

 Score =  431 bits (1107), Expect = e-118
 Identities = 215/251 (85%), Positives = 230/251 (91%)
 Frame = -1

Query: 994 QRFSTSILTLGPDEGAFPSDLLSTKPLATAERTLGLCQDLLIPVTNFRNEDKGFMVLAGD 815
           ++ STSILT G  + AFPSDLLSTK L T ER +GL +DL+IPVTNF NEDKGFMVLAGD
Sbjct: 44  RKLSTSILTPGSSDDAFPSDLLSTKTLLTPEREIGLHEDLVIPVTNFLNEDKGFMVLAGD 103

Query: 814 VFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTVSEVSGTGKKPWNQKGSGRARHGTLRGPQ 635
           VFD+PI+K IIHRVVRWQLAKRQQGTHSTKT+SEVSGTGKKP+ QKG+GRARHGTLRGPQ
Sbjct: 104 VFDVPIKKHIIHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPYRQKGTGRARHGTLRGPQ 163

Query: 634 FRGGATKHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFEDLEVPTHKTKNIVNY 455
           FRGGAT HGPKPRSHA K NKKVRRLGLKIAL+ARAAEGKLLVFEDLE+PTHKTKNIVNY
Sbjct: 164 FRGGATMHGPKPRSHAIKCNKKVRRLGLKIALTARAAEGKLLVFEDLEIPTHKTKNIVNY 223

Query: 454 FQQMEDTKKLLLVDGSPINEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVTR 275
            +QME+TKKLLLVDG PINEKLKLA QNLHYVNVLPSIGLNVYSILLHDTLVMSRDAV R
Sbjct: 224 VKQMEETKKLLLVDGGPINEKLKLAAQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVNR 283

Query: 274 IVERMRTPINR 242
           IVERM TPINR
Sbjct: 284 IVERMHTPINR 294


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