BLASTX nr result

ID: Glycyrrhiza23_contig00020108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020108
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   131   5e-29
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   130   8e-29
ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2...   127   7e-28
ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   123   1e-26
ref|XP_003628784.1| ABC transporter B family member [Medicago tr...   120   1e-25

>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = +3

Query: 3   IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
           IFEMIERDTVSKSSSK GRKL K+EGHIQFK++CFSYPSRPDVAIFNN CLDIP+GKI+A
Sbjct: 339 IFEMIERDTVSKSSSKTGRKLGKLEGHIQFKNICFSYPSRPDVAIFNNLCLDIPSGKIVA 398

Query: 183 LVGGSGSGKS 212
           LVGGSGSGKS
Sbjct: 399 LVGGSGSGKS 408



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/70 (54%), Positives = 51/70 (72%)
 Frame = +3

Query: 3    IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
            +FE+++R   S  S ++G +L  V+G I+ K + FSYPSRPDV IF +F L +PAGK +A
Sbjct: 977  VFEVMDRK--SGISCEVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVA 1034

Query: 183  LVGGSGSGKS 212
            LVG SGSGKS
Sbjct: 1035 LVGQSGSGKS 1044


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/70 (90%), Positives = 67/70 (95%)
 Frame = +3

Query: 3   IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
           IFEMIER+TVSKSSSK GRKL K+EGHIQFK+VCFSYPSRPDVAIFNN CLDIP+GKIIA
Sbjct: 339 IFEMIERETVSKSSSKTGRKLGKLEGHIQFKNVCFSYPSRPDVAIFNNLCLDIPSGKIIA 398

Query: 183 LVGGSGSGKS 212
           LVGGSGSGKS
Sbjct: 399 LVGGSGSGKS 408



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = +3

Query: 3    IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
            +FE+++R   S  S  +G +L  V+G I+ K + FSYPSRPDV IF +F L +PAGK +A
Sbjct: 977  VFEVMDRK--SGISCDVGEELKTVDGTIELKRINFSYPSRPDVIIFKDFNLRVPAGKSVA 1034

Query: 183  LVGGSGSGKS 212
            LVG SGSGKS
Sbjct: 1035 LVGQSGSGKS 1044


>ref|XP_003530557.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1247

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/70 (84%), Positives = 68/70 (97%)
 Frame = +3

Query: 3   IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
           IFEMIERDT+SK+SS+ G+KLSK+EGHIQFKDVCFSYPSRPDV IFNNFC++IP+GKI+A
Sbjct: 334 IFEMIERDTMSKASSENGKKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCIEIPSGKILA 393

Query: 183 LVGGSGSGKS 212
           LVGGSGSGKS
Sbjct: 394 LVGGSGSGKS 403



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/70 (54%), Positives = 47/70 (67%)
 Frame = +3

Query: 3    IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
            IFE+++R T       +G +L  VEG I+ K + F YPSRPDV IFN+F L + AGK IA
Sbjct: 974  IFEVMDRKTGILGD--VGEELKTVEGTIELKRIHFCYPSRPDVVIFNDFNLKVLAGKNIA 1031

Query: 183  LVGGSGSGKS 212
            LVG SG GKS
Sbjct: 1032 LVGHSGCGKS 1041


>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
           gi|355514185|gb|AES95808.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1234

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/70 (85%), Positives = 63/70 (90%)
 Frame = +3

Query: 3   IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
           IFEMIERDTVSK SSK GRKLSK++GHIQF DVCFSYPSRPDV IF N  LDIPAGKI+A
Sbjct: 329 IFEMIERDTVSKKSSKTGRKLSKLDGHIQFNDVCFSYPSRPDVGIFTNLNLDIPAGKIVA 388

Query: 183 LVGGSGSGKS 212
           LVGGSGSGKS
Sbjct: 389 LVGGSGSGKS 398



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/70 (52%), Positives = 50/70 (71%)
 Frame = +3

Query: 3    IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
            +FE+++R +  K  +  G +L  VEG I+ K + FSYPSRPDV IF +F L +P+GK +A
Sbjct: 964  VFEVMDRKSEIKGDA--GEELKTVEGTIELKRINFSYPSRPDVIIFKDFSLRVPSGKSVA 1021

Query: 183  LVGGSGSGKS 212
            LVG SGSGKS
Sbjct: 1022 LVGQSGSGKS 1031


>ref|XP_003628784.1| ABC transporter B family member [Medicago truncatula]
           gi|355522806|gb|AET03260.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 488

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/70 (78%), Positives = 64/70 (91%)
 Frame = +3

Query: 3   IFEMIERDTVSKSSSKIGRKLSKVEGHIQFKDVCFSYPSRPDVAIFNNFCLDIPAGKIIA 182
           IFEMIERD VSK+SSK  RKL K++GHIQF +VCFSYPSRPDV IFNNFCL+IP+GK++A
Sbjct: 325 IFEMIERDIVSKNSSKNDRKLKKIDGHIQFTNVCFSYPSRPDVVIFNNFCLEIPSGKVVA 384

Query: 183 LVGGSGSGKS 212
           +VGGSGSGKS
Sbjct: 385 IVGGSGSGKS 394


Top