BLASTX nr result

ID: Glycyrrhiza23_contig00020106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020106
         (2043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   986   0.0  
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   964   0.0  
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...   939   0.0  
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   810   0.0  
ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   798   0.0  

>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 565

 Score =  986 bits (2550), Expect = 0.0
 Identities = 485/567 (85%), Positives = 525/567 (92%)
 Frame = -3

Query: 1870 MTFFFLRRNRDVFARALIGIKEPFRVYFRFKFECLGGGGGFNKVHPYSSSRGSIRNDFTD 1691
            M  F LRRNR++F+R+L+G KEPFR+YF+FK + LGG    NKVHPYSS  G IRNDFTD
Sbjct: 1    MASFLLRRNRNLFSRSLLGKKEPFRLYFQFKSQSLGGAA--NKVHPYSSRNGPIRNDFTD 58

Query: 1690 LTCPHTWYPQARRKRRRVILHVGPTNSGKTHNALKQLESSASGIYCGPLRLLAWEIAKRL 1511
            LTCPHTWYPQAR+K RR+ILHVGPTNSGKTH+ALKQLESSASG+YCGPLRLLAWEIAKRL
Sbjct: 59   LTCPHTWYPQARKKHRRIILHVGPTNSGKTHHALKQLESSASGVYCGPLRLLAWEIAKRL 118

Query: 1510 NKAKVPCDLITGQEREEVDGANHKAVTVEMADVSVDYKCAVIDEIQMLGCNTRGYSFTRA 1331
            NKA+VPCDLITGQER+EVDGANHKAVTVEM DVS DY+CAVIDEIQM+GC TRGYSFTRA
Sbjct: 119  NKAQVPCDLITGQERDEVDGANHKAVTVEMVDVSADYQCAVIDEIQMIGCITRGYSFTRA 178

Query: 1330 LLGIAADELHLCGDPAAVPLIQEILSITGDDVEVKFYERLSPLVPLKVPLGSFTNIRKGD 1151
            LLGIAADELHLCGDPAAVPLIQEI+ ITGD++EV+FYERLSPLVPLKVPLGSF+N+R GD
Sbjct: 179  LLGIAADELHLCGDPAAVPLIQEIMKITGDEIEVQFYERLSPLVPLKVPLGSFSNVRNGD 238

Query: 1150 CIVTFSRQEIYRLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLVASDAI 971
            CIVTFSRQEIY+LKKRIE+EGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLVASDAI
Sbjct: 239  CIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLVASDAI 298

Query: 970  GMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNCPVGEVTCMDAEDXX 791
            GMGLNLNISRIIFSTMKKFDGFE+RDLTVPEIKQIAGRAGRYGSN PVGEVTCMD ED  
Sbjct: 299  GMGLNLNISRIIFSTMKKFDGFEVRDLTVPEIKQIAGRAGRYGSNFPVGEVTCMDEEDLP 358

Query: 790  XXXXXXXXXXPILERAGLLPSFDLLYMYSRLHSKNGFFQILEHFIDNAKLSEKYFIVNCD 611
                      PILERAG+LP+FDL+YMYSRLH +NGF+QIL HF+DNAKLSE YFIVNC+
Sbjct: 359  LLHSSLNSPSPILERAGILPTFDLMYMYSRLHPRNGFYQILAHFLDNAKLSENYFIVNCE 418

Query: 610  QLLKVAAVIDEFPLGLREKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLREIFIPG 431
            QLLKVAAVIDE PLGL EKYLFCISPADMDDEISSQGL QFAENYAKKGLVRLREIF PG
Sbjct: 419  QLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQFAENYAKKGLVRLREIFTPG 478

Query: 430  TLKVPKTPSALKDLESIHKVLDLYVWLSFRLEESFPDRELASSQKAICSMLIEEFLERLG 251
            +LKVPKTP+ALK+LESIHKVLDLYVWLSFRLEESFPD ELA+SQKAICSMLIEEFLERLG
Sbjct: 479  SLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAASQKAICSMLIEEFLERLG 538

Query: 250  WQKPMARRLPSRKVSNSLLSQHMRRYL 170
            WQKPMARRLPS K+S+SLLSQHMR++L
Sbjct: 539  WQKPMARRLPSHKMSSSLLSQHMRKHL 565


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 600

 Score =  964 bits (2493), Expect = 0.0
 Identities = 488/602 (81%), Positives = 521/602 (86%), Gaps = 35/602 (5%)
 Frame = -3

Query: 1870 MTFFFLRRNRDVFARALIGI-----------------------------------KEPFR 1796
            M  F LRRNR++FAR+L+G                                    KEPFR
Sbjct: 1    MASFLLRRNRNLFARSLLGSLPPPSNPYYHLSHFVFGYFCCLYGVDDPSRPHSGNKEPFR 60

Query: 1795 VYFRFKFECLGGGGGFNKVHPYSSSRGSIRNDFTDLTCPHTWYPQARRKRRRVILHVGPT 1616
             YF+ KF  LGG    NKVHPYSSS G IRNDFTDLTCPHTWYPQARRK RRVILHVGPT
Sbjct: 61   PYFQLKFLSLGGAA--NKVHPYSSSNGPIRNDFTDLTCPHTWYPQARRKHRRVILHVGPT 118

Query: 1615 NSGKTHNALKQLESSASGIYCGPLRLLAWEIAKRLNKAKVPCDLITGQEREEVDGANHKA 1436
            NSGKTH+ALKQLESSASG+YCGPLRLLAWEIAKRLNKA+VPCDLITGQEREEVDGANHKA
Sbjct: 119  NSGKTHHALKQLESSASGVYCGPLRLLAWEIAKRLNKAQVPCDLITGQEREEVDGANHKA 178

Query: 1435 VTVEMADVSVDYKCAVIDEIQMLGCNTRGYSFTRALLGIAADELHLCGDPAAVPLIQEIL 1256
            VTVEMAD+S DY+CAVIDEIQM+GC TRGYSFTRALLGIAADELHLCGDPAAVPLIQEIL
Sbjct: 179  VTVEMADLSADYQCAVIDEIQMIGCTTRGYSFTRALLGIAADELHLCGDPAAVPLIQEIL 238

Query: 1255 SITGDDVEVKFYERLSPLVPLKVPLGSFTNIRKGDCIVTFSRQEIYRLKKRIEREGKHLC 1076
             ITGD++EV+FYERLSPLVPL VPLGSF+N+R GDCIVTFSRQEIY+LKKRIE+EGKHLC
Sbjct: 239  KITGDEIEVQFYERLSPLVPLNVPLGSFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLC 298

Query: 1075 SVVYGSLPPETRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEMR 896
            SVVYGSLPPETRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFE+R
Sbjct: 299  SVVYGSLPPETRTRQASMFNDASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVR 358

Query: 895  DLTVPEIKQIAGRAGRYGSNCPVGEVTCMDAEDXXXXXXXXXXXXPILERAGLLPSFDLL 716
            DL+VPEIKQIAGRAGRYGSN PVGEVTCMD ED            PILERAGLLP+FDL+
Sbjct: 359  DLSVPEIKQIAGRAGRYGSNFPVGEVTCMDEEDLLLLHSSLNSPSPILERAGLLPTFDLM 418

Query: 715  YMYSRLHSKNGFFQILEHFIDNAKLSEKYFIVNCDQLLKVAAVIDEFPLGLREKYLFCIS 536
            YMYSRLH +NGF+QIL HF+D+AKLSE YFIVNC+QLLKVAAVIDE PLGL EKYLFCIS
Sbjct: 419  YMYSRLHPRNGFYQILAHFLDHAKLSENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCIS 478

Query: 535  PADMDDEISSQGLTQFAENYAKKGLVRLREIFIPGTLKVPKTPSALKDLESIHKVLDLYV 356
            PADMDDEISSQGLTQFAENYAKKGLVRLREIF PG+LKVPKTP+ALK+LESIHKVLDLYV
Sbjct: 479  PADMDDEISSQGLTQFAENYAKKGLVRLREIFTPGSLKVPKTPAALKELESIHKVLDLYV 538

Query: 355  WLSFRLEESFPDRELASSQKAICSMLIEEFLERLGWQKPMARRLPSRKVSNSLLSQHMRR 176
            WLSFRLEESFPD ELA SQKAICSMLIEEFLERLGWQKPMARRL S K+S+ LLSQHMR+
Sbjct: 539  WLSFRLEESFPDHELAVSQKAICSMLIEEFLERLGWQKPMARRLASHKMSSPLLSQHMRK 598

Query: 175  YL 170
             L
Sbjct: 599  CL 600


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
            gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
            SUPV3L1 [Medicago truncatula]
          Length = 570

 Score =  939 bits (2428), Expect = 0.0
 Identities = 468/572 (81%), Positives = 513/572 (89%), Gaps = 5/572 (0%)
 Frame = -3

Query: 1870 MTFFFLRRNRDVFARALIG-IKEPFRVYFRFKFECLGGGGGFNKVHPYS----SSRGSIR 1706
            M  F LRRN ++ AR+L G  KE F  YF+ KFECLG     N +HPYS    S+ GSIR
Sbjct: 1    MASFLLRRNSNLLARSLTGNYKEQFCPYFQAKFECLGAA--LNSLHPYSRSYGSASGSIR 58

Query: 1705 NDFTDLTCPHTWYPQARRKRRRVILHVGPTNSGKTHNALKQLESSASGIYCGPLRLLAWE 1526
            N+ TD+TCPHTWYP ARRKRRRV LHVGPTNSGKT+ ALKQL+SSASGIYCGPLRLLAWE
Sbjct: 59   NEITDMTCPHTWYPLARRKRRRVFLHVGPTNSGKTYQALKQLQSSASGIYCGPLRLLAWE 118

Query: 1525 IAKRLNKAKVPCDLITGQEREEVDGANHKAVTVEMADVSVDYKCAVIDEIQMLGCNTRGY 1346
            +AKRLNKA VPCDLITGQER+EV+GA+HKAVTVEMADVS DYKCAVIDEIQMLGCNTRGY
Sbjct: 119  VAKRLNKANVPCDLITGQERDEVEGAHHKAVTVEMADVSTDYKCAVIDEIQMLGCNTRGY 178

Query: 1345 SFTRALLGIAADELHLCGDPAAVPLIQEILSITGDDVEVKFYERLSPLVPLKVPLGSFTN 1166
            SFTRALLGIAADELHLCGDPAAVPLIQEIL ITGD++EV++YERLSPLVP+KVPL S ++
Sbjct: 179  SFTRALLGIAADELHLCGDPAAVPLIQEILDITGDELEVQYYERLSPLVPMKVPLRSLSD 238

Query: 1165 IRKGDCIVTFSRQEIYRLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLV 986
            +R GDCIVTFSR++IY+LKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLV
Sbjct: 239  VRNGDCIVTFSRRDIYKLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLV 298

Query: 985  ASDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNCPVGEVTCMD 806
            ASDAIGMGLNLNISRIIFSTM+KFDGF+MRDLTVPEIKQIAGRAGRYGSN P+GEVTCM 
Sbjct: 299  ASDAIGMGLNLNISRIIFSTMQKFDGFQMRDLTVPEIKQIAGRAGRYGSNFPLGEVTCMS 358

Query: 805  AEDXXXXXXXXXXXXPILERAGLLPSFDLLYMYSRLHSKNGFFQILEHFIDNAKLSEKYF 626
             +D            PILERAGLLPS++LLYMYSRLH + GF+Q+LEHF+DNAKLSEKYF
Sbjct: 359  GDDLPLLHSALDSPSPILERAGLLPSYELLYMYSRLHPQAGFYQVLEHFVDNAKLSEKYF 418

Query: 625  IVNCDQLLKVAAVIDEFPLGLREKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLRE 446
            IVNCDQ+LKVAAV+DEFPL LR+KYLFCISPADMDDEISSQGLTQF ENYAKKGLVRLRE
Sbjct: 419  IVNCDQVLKVAAVVDEFPLELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLVRLRE 478

Query: 445  IFIPGTLKVPKTPSALKDLESIHKVLDLYVWLSFRLEESFPDRELASSQKAICSMLIEEF 266
            IF PGTLKVP TP ALKDLESIHKVLDLYVWLSFRLE+SFPD ELA SQKA+CSMLIEEF
Sbjct: 479  IFTPGTLKVPTTPQALKDLESIHKVLDLYVWLSFRLEDSFPDHELAKSQKALCSMLIEEF 538

Query: 265  LERLGWQKPMARRLPSRKVSNSLLSQHMRRYL 170
            L+R GWQKPMARRLP RKVSNSLLSQ++R++L
Sbjct: 539  LDRYGWQKPMARRLPLRKVSNSLLSQNLRQHL 570


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  810 bits (2092), Expect = 0.0
 Identities = 406/568 (71%), Positives = 470/568 (82%), Gaps = 5/568 (0%)
 Frame = -3

Query: 1858 FLRRNRDVFARALIGIK----EPFRVYFRFKFECLGGGGGFNKVHPYSSSRGSIRNDFTD 1691
            FL R+R V    + GI     +P R +   +   L G     + +  S+   + + DF D
Sbjct: 4    FLLRHRQVSTLGVSGILKDKLDPSRPHVESRLGALAGVCNLLREYSTSNDNRAHKFDFLD 63

Query: 1690 LTCPHTWYPQARRKRRRVILHVGPTNSGKTHNALKQLESSASGIYCGPLRLLAWEIAKRL 1511
            LTCPH WYP ARRK R++ LHVGPTNSGKT++ALKQLESS SG+YCGPLRLLAWE+AKRL
Sbjct: 64   LTCPHAWYPVARRKNRKIFLHVGPTNSGKTYHALKQLESSPSGVYCGPLRLLAWEVAKRL 123

Query: 1510 NKAKVPCDLITGQEREEVDGANHKAVTVEMADVSVDYKCAVIDEIQMLGCNTRGYSFTRA 1331
            NKA VPCDLITGQEREEV+GA HKAVTVEMADV+ +Y CAV+DEIQMLGC TRG+SFTRA
Sbjct: 124  NKANVPCDLITGQEREEVNGAKHKAVTVEMADVTSNYSCAVVDEIQMLGCMTRGFSFTRA 183

Query: 1330 LLGIAADELHLCGDPAAVPLIQEILSITGDDVEVKFYERLSPLVPLKVPLGSFTNIRKGD 1151
            LLGI+ADELHLCGDPAAVPLIQEIL  TGDD+ V++YERLSPLVP + PLGSF NI+ GD
Sbjct: 184  LLGISADELHLCGDPAAVPLIQEILKPTGDDIHVQYYERLSPLVPSQKPLGSFKNIQTGD 243

Query: 1150 CIVTFSRQEIYRLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEFDVLVASDAI 971
            CIVTFSR+EIY+LK +IER  KHLCSVVYGSLPPETRTRQA+MFNDASSEFDVLVASDAI
Sbjct: 244  CIVTFSRREIYKLKGQIERGRKHLCSVVYGSLPPETRTRQATMFNDASSEFDVLVASDAI 303

Query: 970  GMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNCPVGEVTCMDAEDXX 791
            GMGLNLNISRIIFSTMKKFDG EMRDLT+ E+KQIAGRAGRYGS+ PVGEVTC+ A+D  
Sbjct: 304  GMGLNLNISRIIFSTMKKFDGVEMRDLTISEVKQIAGRAGRYGSDFPVGEVTCLHADDLP 363

Query: 790  XXXXXXXXXXPILERAGLLPSFDLLYMYSRLHSKNGFFQILEHFIDNAKLSEKYFIVNCD 611
                      PILE AGL P+FDL++MYSRLH K G ++I+EHF++NAKLSE YFI NC+
Sbjct: 364  LLHSSLKSPSPILECAGLFPTFDLIFMYSRLHPKKGLYRIMEHFLENAKLSENYFIANCE 423

Query: 610  QLLKVAAVIDEFPLGLREKYLFCISPADMDDEISSQGLTQFAENYAKKGLVRLREIFIPG 431
            ++LKVAAV+D  P+ L +KYLF ISP DM +EISSQGLTQFA+NYA+KG+VRL+EIF PG
Sbjct: 424  EMLKVAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQFAQNYAQKGIVRLKEIFTPG 483

Query: 430  TLKVPKTPSALKDLESIHKVLDLYVWLSFRLEESFPDRELASSQKAICSMLIEEFLERLG 251
            TL+VPKT SALK+LESIHKVLDLYVWLSFRLE+SFPDRELA+SQKAIC +LIEEFLER G
Sbjct: 484  TLQVPKTESALKELESIHKVLDLYVWLSFRLEDSFPDRELAASQKAICGLLIEEFLERFG 543

Query: 250  WQK-PMARRLPSRKVSNSLLSQHMRRYL 170
            WQK P  R+LPSR  S  LLS+  R+Y+
Sbjct: 544  WQKQPKTRKLPSRVNSGFLLSKETRQYV 571


>ref|XP_004134129.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Cucumis sativus] gi|449504169|ref|XP_004162271.1|
            PREDICTED: ATP-dependent RNA helicase SUPV3L1,
            mitochondrial-like [Cucumis sativus]
          Length = 560

 Score =  798 bits (2060), Expect = 0.0
 Identities = 392/524 (74%), Positives = 446/524 (85%), Gaps = 3/524 (0%)
 Frame = -3

Query: 1732 YSSSRGSIRNDFTDLTCPHTWYPQARRKRRRVILHVGPTNSGKTHNALKQLESSASGIYC 1553
            YS SR +   DFTDLTCPH+WYP AR+K R++ LH+GPTNSGKTHNALK+LESS SG+YC
Sbjct: 39   YSISRSNF--DFTDLTCPHSWYPNARKKHRKIFLHMGPTNSGKTHNALKRLESSDSGVYC 96

Query: 1552 GPLRLLAWEIAKRLNKAKVPCDLITGQEREEVDGANHKAVTVEMADVSVDYKCAVIDEIQ 1373
            GPLRLLAWE+AKRLN AK+PCDLITGQEREEVDGA HKAVTVEMADV+  Y CAVIDEIQ
Sbjct: 97   GPLRLLAWEVAKRLNNAKIPCDLITGQEREEVDGAKHKAVTVEMADVTSSYSCAVIDEIQ 156

Query: 1372 MLGCNTRGYSFTRALLGIAADELHLCGDPAAVPLIQEILSITGDDVEVKFYERLSPLVPL 1193
            MLGC TRGYSFTRALLG+ ADE+HLCGD A VPLIQEIL +TGDD+EV++YERLSPL+PL
Sbjct: 157  MLGCKTRGYSFTRALLGLCADEIHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPL 216

Query: 1192 KVPLGSFTNIRKGDCIVTFSRQEIYRLKKRIEREGKHLCSVVYGSLPPETRTRQASMFND 1013
             +PLGS++NIRKGDCIVTFSR+ IY  KK IER+G HLCS+VYGSLPPETRTRQA MFND
Sbjct: 217  NIPLGSYSNIRKGDCIVTFSRRRIYGYKKEIERQGGHLCSIVYGSLPPETRTRQAMMFND 276

Query: 1012 ASSEFDVLVASDAIGMGLNLNISRIIFSTMKKFDGFEMRDLTVPEIKQIAGRAGRYGSNC 833
             +SEFDVLVASDAIGMGLNLNISRIIFSTM+KFDGFEMR+LTVPEIKQIAGRAGRYGS  
Sbjct: 277  TTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKF 336

Query: 832  PVGEVTCMDAEDXXXXXXXXXXXXPILERAGLLPSFDLLYMYSRLHSKNGFFQILEHFID 653
            P+GEVTC+  +D            P +ERAGL P+F+L+Y+YSRLH ++G  QILEHF++
Sbjct: 337  PIGEVTCISGDDLPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPEHGLRQILEHFVE 396

Query: 652  NAKLSEKYFIVNCDQLLKVAAVIDEFPLGLREKYLFCISPADMDDEISSQGLTQFAENYA 473
            NAKLSE YFIV+C+ +LKVAAV+DE PL L +KYLFCISPADMDDEI+SQGLTQF + YA
Sbjct: 397  NAKLSENYFIVDCEVMLKVAAVLDEMPLSLHDKYLFCISPADMDDEITSQGLTQFVQGYA 456

Query: 472  KKGLVRLREIFIPGTLKVPKTPSALKDLESIHKVLDLYVWLSFRLEESFPDRELASSQKA 293
             KG+VRLREIF  GTLKVP+TP+ALK+LESIHKVLDLYVWLSFRLEESFPDRE A SQK+
Sbjct: 457  NKGIVRLREIFKEGTLKVPETPAALKELESIHKVLDLYVWLSFRLEESFPDRERADSQKS 516

Query: 292  ICSMLIEEFLERLGWQKPMARRLPSR---KVSNSLLSQHMRRYL 170
             CSMLIEEFL R G Q P  R+L S    +  NSLLS   +R L
Sbjct: 517  FCSMLIEEFLGRSGMQIPTRRKLKSNIRSRSLNSLLSVVAKRRL 560


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