BLASTX nr result

ID: Glycyrrhiza23_contig00020104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020104
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42290.1| unknown [Lotus japonicus]                              145   3e-33
ref|XP_003521288.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   141   5e-32
gb|ACU19847.1| unknown [Glycine max]                                  141   5e-32
ref|XP_003554286.1| PREDICTED: UPF0420 protein C16orf58 homolog ...   135   4e-30
ref|NP_001189649.1| uncharacterized protein [Arabidopsis thalian...   121   5e-26

>gb|AFK42290.1| unknown [Lotus japonicus]
          Length = 414

 Score =  145 bits (366), Expect = 3e-33
 Identities = 70/81 (86%), Positives = 74/81 (91%)
 Frame = -3

Query: 244 MEKEEEGSVFWFETSHSVCRRHHFESDGHLSVMLVDDSRPLYQKVAASFLNKFFPSGYPY 65
           MEK E G VFWFETS SVC RHHF+S+G LSVMLVDDSRPLYQKVA SF+NKFFPSGYPY
Sbjct: 1   MEKGE-GPVFWFETSGSVCHRHHFQSNGQLSVMLVDDSRPLYQKVAGSFMNKFFPSGYPY 59

Query: 64  SVNEGYLRYTQFRAVQHVTSA 2
           SVNEGYLRYTQFR+VQHVTSA
Sbjct: 60  SVNEGYLRYTQFRSVQHVTSA 80


>ref|XP_003521288.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 415

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/79 (83%), Positives = 70/79 (88%)
 Frame = -3

Query: 238 KEEEGSVFWFETSHSVCRRHHFESDGHLSVMLVDDSRPLYQKVAASFLNKFFPSGYPYSV 59
           KE E  V WFETS SVCRRH FE DG LSV++VDDSRPLYQ+VA SF+NKFFPSGYPYSV
Sbjct: 2   KEGEAPVLWFETSDSVCRRHQFEPDGQLSVVIVDDSRPLYQRVAGSFMNKFFPSGYPYSV 61

Query: 58  NEGYLRYTQFRAVQHVTSA 2
           NEGYLRYTQFRAVQHVTSA
Sbjct: 62  NEGYLRYTQFRAVQHVTSA 80


>gb|ACU19847.1| unknown [Glycine max]
          Length = 302

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/79 (83%), Positives = 70/79 (88%)
 Frame = -3

Query: 238 KEEEGSVFWFETSHSVCRRHHFESDGHLSVMLVDDSRPLYQKVAASFLNKFFPSGYPYSV 59
           KE E  V WFETS SVCRRH FE DG LSV++VDDSRPLYQ+VA SF+NKFFPSGYPYSV
Sbjct: 2   KEGEAPVLWFETSDSVCRRHQFEPDGQLSVVIVDDSRPLYQRVAGSFMNKFFPSGYPYSV 61

Query: 58  NEGYLRYTQFRAVQHVTSA 2
           NEGYLRYTQFRAVQHVTSA
Sbjct: 62  NEGYLRYTQFRAVQHVTSA 80


>ref|XP_003554286.1| PREDICTED: UPF0420 protein C16orf58 homolog [Glycine max]
          Length = 419

 Score =  135 bits (339), Expect = 4e-30
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = -3

Query: 241 EKEEEGSVFWFETSHSVCRRHHFESDGHLSVMLVDDSRPLYQKVAASFLNKFFPSGYPYS 62
           +KE E  V WFETS SVC +H FE DG LSV++VDDSRPLYQ++A SF+NKFFPSGYPYS
Sbjct: 5   KKEGEAPVLWFETSDSVCCQHQFEPDGRLSVVIVDDSRPLYQRMAGSFMNKFFPSGYPYS 64

Query: 61  VNEGYLRYTQFRAVQHVTSA 2
           VNEGYLRYTQFRA+QHVTSA
Sbjct: 65  VNEGYLRYTQFRALQHVTSA 84


>ref|NP_001189649.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330253412|gb|AEC08506.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 432

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/81 (67%), Positives = 68/81 (83%)
 Frame = -3

Query: 244 MEKEEEGSVFWFETSHSVCRRHHFESDGHLSVMLVDDSRPLYQKVAASFLNKFFPSGYPY 65
           ++  E+  V+WFETS SV  R+ F+SDGHLS+ +VDD+RP+ QK+  SFLNKFFPSGYPY
Sbjct: 18  LKSPEDFPVYWFETSDSVSHRYQFQSDGHLSMKVVDDARPVPQKMVESFLNKFFPSGYPY 77

Query: 64  SVNEGYLRYTQFRAVQHVTSA 2
           SVNEGYLRYTQFRA+QH +SA
Sbjct: 78  SVNEGYLRYTQFRALQHFSSA 98


Top