BLASTX nr result

ID: Glycyrrhiza23_contig00020093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020093
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554977.1| PREDICTED: translation initiation factor eIF...   347   2e-93
ref|XP_003543906.1| PREDICTED: translation initiation factor eIF...   342   7e-92
ref|XP_003637053.1| Translation initiation factor eIF-2B delta s...   302   6e-80
ref|XP_003551797.1| PREDICTED: translation initiation factor eIF...   300   4e-79
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...   250   3e-64

>ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 660

 Score =  347 bits (891), Expect = 2e-93
 Identities = 197/322 (61%), Positives = 207/322 (64%), Gaps = 12/322 (3%)
 Frame = +3

Query: 3    SLSPVMIPPPRHLSDNLLLHA-RPAVSPRRRLDTISAGGRXXXXXXXXXXXXXXXX---- 167
            SLSPVMIPPPRHLSDNLLLHA RPA SP          G                     
Sbjct: 47   SLSPVMIPPPRHLSDNLLLHAPRPASSPLSAAAAAGGSGNSFDYGAVFFPAPLSPAIPSS 106

Query: 168  --RXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGGFDLTAVKASA-----VPASELTTVS 326
                                           PRGGFDLTA+K +A     VPASELTTVS
Sbjct: 107  SYSSRIIATTGEGGFFKGNGAGGGKVAASSFPRGGFDLTAMKKAAAASVVVPASELTTVS 166

Query: 327  VVNDSLGIPEKEKANKGGGSAVEVKDQPAGSKQQKPKASXXXXXXXXXXXXXXXXXXXXX 506
            VVNDSLGIPEKEK NK GGSAVEVKDQP  SKQQKPK S                     
Sbjct: 167  VVNDSLGIPEKEKGNKAGGSAVEVKDQPNSSKQQKPKLSKAERRALQESQRAAKAAAKGE 226

Query: 507  GNKAPGTVTSVNXXXXXXXXXXXXXDNPAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDK 686
            G+KA GTV ++N             DN AVAASEKKGG+ PPEKDRKKDAPQPRMQYDDK
Sbjct: 227  GSKASGTVATMNAKPAKAVKPAQKVDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDK 286

Query: 687  SRVDKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQY 866
            SRV+KAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHL PVHP+VYKVGLQY
Sbjct: 287  SRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLSPVHPSVYKVGLQY 346

Query: 867  LSGDISGANARCIAMLQAFQEA 932
            L+GDI+G NARCIAMLQAFQEA
Sbjct: 347  LTGDIAGGNARCIAMLQAFQEA 368


>ref|XP_003543906.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 659

 Score =  342 bits (877), Expect = 7e-92
 Identities = 196/321 (61%), Positives = 205/321 (63%), Gaps = 11/321 (3%)
 Frame = +3

Query: 3    SLSPVMIPPPRHLSDNLLLH-ARPAVSPRRRLDTISAGGRXXXXXXXXXXXXXXXXRXXX 179
            SLSPVMIPPPRHLSDNLLLH  RPA SP      ++A G                     
Sbjct: 47   SLSPVMIPPPRHLSDNLLLHDPRPAASPLSSASAVAAAGSGNSFDSADFFPAPLSPAMPS 106

Query: 180  XXXXXXXXXXXXXXXXXXXXXXXXX-------PRGGFDLTAVKA-SAVPASELTTVSVVN 335
                                            PRGGFDLTA+KA S VPASELTTVSVVN
Sbjct: 107  SSYSSRIATGGASDGGYFKGNGAGGKLAASSFPRGGFDLTAMKAASLVPASELTTVSVVN 166

Query: 336  DSLGIPEKEKANKGGGSAVEVKDQPAGSKQQKPK--ASXXXXXXXXXXXXXXXXXXXXXG 509
            DSLGIPEKEK NK GGSAVEVKDQP  SKQQKPK   S                     G
Sbjct: 167  DSLGIPEKEKGNKTGGSAVEVKDQPNSSKQQKPKPKTSKAERRALQEAQRAAKAAEKGEG 226

Query: 510  NKAPGTVTSVNXXXXXXXXXXXXXDNPAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKS 689
            +KA GT  S N             DN A+AASEKKGG+ PPEKDRKKDAPQPR+QYDDKS
Sbjct: 227  SKASGTAASTNPKPAKAVKPAQKVDNAAIAASEKKGGEIPPEKDRKKDAPQPRLQYDDKS 286

Query: 690  RVDKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQYL 869
            RV+KAKRRAVVKQTEARNRVELFRHLPQYE GSQLPDLEAKFFHL PVHP VYKVGLQYL
Sbjct: 287  RVEKAKRRAVVKQTEARNRVELFRHLPQYERGSQLPDLEAKFFHLSPVHPLVYKVGLQYL 346

Query: 870  SGDISGANARCIAMLQAFQEA 932
            +GDISG NARCIAMLQAFQEA
Sbjct: 347  TGDISGGNARCIAMLQAFQEA 367


>ref|XP_003637053.1| Translation initiation factor eIF-2B delta subunit [Medicago
            truncatula] gi|355502988|gb|AES84191.1| Translation
            initiation factor eIF-2B delta subunit [Medicago
            truncatula]
          Length = 693

 Score =  302 bits (774), Expect = 6e-80
 Identities = 183/354 (51%), Positives = 199/354 (56%), Gaps = 44/354 (12%)
 Frame = +3

Query: 3    SLSPVMIPPPRHLSDNLLLHARPAVSPR-RRLDTISAGGRXXXXXXXXXXXXXXXXRXXX 179
            SLSPVMIPPPRHLSDNLL+H   A+ P  RR ++IS GG                     
Sbjct: 54   SLSPVMIPPPRHLSDNLLIHRSAAMVPSPRRAESISVGGNGSYSDAAPVSPAPSSS---- 109

Query: 180  XXXXXXXXXXXXXXXXXXXXXXXXXPRGGFDLTAVKASAV-PASELTTVSVVNDSLGIPE 356
                                     PRGGFDLTA+K + V   S LTTVSVVNDSL I E
Sbjct: 110  --YSSRLGGERGFFDGKEKIVASSFPRGGFDLTALKGNVVVKESALTTVSVVNDSLVIHE 167

Query: 357  KEKANKGGGSAVEVKDQPAGSKQQKPKASXXXXXXXXXXXXXXXXXXXXXGNKAPGTVTS 536
            KEK +KGGGSA E+KDQ   SKQQKPK +                     GNKA  T TS
Sbjct: 168  KEKPHKGGGSAGEMKDQSNSSKQQKPKLTKAERRELQEAQRAAKAAAKGEGNKASATATS 227

Query: 537  VNXXXXXXXXXXXXXDNPAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVDKAKRRA 716
             N             DN +VAA+EKKGGD P EKDRKKD PQPR+QYDDKSRV+KAKRR+
Sbjct: 228  ANARPAKAVKPAQKSDNASVAATEKKGGDFPHEKDRKKDVPQPRLQYDDKSRVEKAKRRS 287

Query: 717  VVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYK--------------- 851
            VVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFF LYP+HPAVYK               
Sbjct: 288  VVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFDLYPMHPAVYKLKLIHEVVVNRTVIR 347

Query: 852  ---------------------------VGLQYLSGDISGANARCIAMLQAFQEA 932
                                       VGLQY+SGDISG N RCIAMLQAFQEA
Sbjct: 348  TQFNTFCELELFKYASSNPNDLHCACQVGLQYISGDISGGNDRCIAMLQAFQEA 401


>ref|XP_003551797.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Glycine max]
          Length = 627

 Score =  300 bits (767), Expect = 4e-79
 Identities = 179/312 (57%), Positives = 191/312 (61%), Gaps = 2/312 (0%)
 Frame = +3

Query: 3   SLSPVMIPPPRHLSDNLLLHARPAVSPRRRLDTISAGGRXXXXXXXXXXXXXXXXRXXXX 182
           SLSPVMIPPPRH S+NL LH R A +     ++ +AG                       
Sbjct: 39  SLSPVMIPPPRHSSENLGLHTRLAATSPSAQESFAAGS------YSSSSDFFPAPMSPAT 92

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXPRGGFDLTAVKASAVPASELTTVSVVND-SLGIPEK 359
                                   PRGGFDLTA  AS+VPASELTTVSVVN  SL I   
Sbjct: 93  SPYSSRIVGGDGDFFAGGKAASSFPRGGFDLTATMASSVPASELTTVSVVNAASLSIR-- 150

Query: 360 EKANKGGGSAVEVKDQPAGSKQQKP-KASXXXXXXXXXXXXXXXXXXXXXGNKAPGTVTS 536
                  GSAVEVKDQ   +KQQK  K S                     GNKA GT+ S
Sbjct: 151 -------GSAVEVKDQALNTKQQKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLAS 203

Query: 537 VNXXXXXXXXXXXXXDNPAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVDKAKRRA 716
           VN             DN +VAASEKKGGD PPEKDRKKD PQPR+QYDDKSRV+KAKRRA
Sbjct: 204 VNVKPAKAAKPPQKVDNASVAASEKKGGDRPPEKDRKKDVPQPRLQYDDKSRVEKAKRRA 263

Query: 717 VVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQYLSGDISGANA 896
           VVKQTEA+NRVELFRHLPQYEHGSQLPDLEAKFF L PVHPAVYKVGLQYLSGDISG NA
Sbjct: 264 VVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGPVHPAVYKVGLQYLSGDISGGNA 323

Query: 897 RCIAMLQAFQEA 932
           RCIAMLQAFQEA
Sbjct: 324 RCIAMLQAFQEA 335


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
           [Vitis vinifera]
          Length = 650

 Score =  250 bits (639), Expect = 3e-64
 Identities = 162/319 (50%), Positives = 182/319 (57%), Gaps = 9/319 (2%)
 Frame = +3

Query: 3   SLSPVMIPPPRHLSDNLLLHARPAVSP--RRRLDTISAGG-RXXXXXXXXXXXXXXXXRX 173
           SLSPVMIPPPRH SDNLL  ARPA+ P  RR  DTI  G                   + 
Sbjct: 51  SLSPVMIPPPRHASDNLL-SARPALYPPLRRPGDTIPVGSYNPSEFFHGTSPTASFYSKV 109

Query: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXPRGGFDLTAVKASAVPASELTTVSVVNDSLGIP 353
                                      P GGFDLTAVK S      LTTVSVVN   GI 
Sbjct: 110 GDGEFSEDASGAGWTHRGNSGKVASSFPGGGFDLTAVKPS-----NLTTVSVVNMPPGI- 163

Query: 354 EKEKANKGGGSAVEVK-DQPAGSKQQKPKASXXXXXXXXXXXXXXXXXXXXXGNKAP--- 521
               + K GG+++EV+ +QPA S+  K K S                      +KAP   
Sbjct: 164 ----SVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSKAPIAA 219

Query: 522 -GTVTSVNXXXXXXXXXXXXX-DNPAVAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRV 695
            G  TSVN              D+ +V ASEKKG D PPEKDRKKD P PRMQ+DDKSRV
Sbjct: 220 SGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQFDDKSRV 279

Query: 696 DKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFHLYPVHPAVYKVGLQYLSG 875
           +KAKRRAVV+  E RNRVELFRHLPQYE G+ LPDLE+KFF L P+HPAVYKVGLQYL+G
Sbjct: 280 EKAKRRAVVRPIEVRNRVELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAG 339

Query: 876 DISGANARCIAMLQAFQEA 932
           D+SG NARCIAMLQAFQEA
Sbjct: 340 DVSGGNARCIAMLQAFQEA 358


Top