BLASTX nr result

ID: Glycyrrhiza23_contig00020086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020086
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   400   e-109
ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methy...   333   3e-89
ref|XP_002516422.1| RNA binding protein, putative [Ricinus commu...   328   6e-88
ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83
ref|NP_974023.1| S-adenosylmethionine-dependent methyltransferas...   311   1e-82

>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Glycine max]
          Length = 444

 Score =  400 bits (1027), Expect = e-109
 Identities = 206/255 (80%), Positives = 219/255 (85%), Gaps = 4/255 (1%)
 Frame = -1

Query: 753 MKQLPTLLMKSLS--VCSLPTTA--TTLQEIASHQPXXXXXXXXXXXKTQLFKDGNPMVY 586
           MKQLPTLLMKSLS  VCSLP  A  TTLQ+IA HQP           KTQLFKDGNPMVY
Sbjct: 1   MKQLPTLLMKSLSLSVCSLPAAASTTTLQQIALHQPKGVAKVVLKKGKTQLFKDGNPMVY 60

Query: 585 SGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLGDEATSDSACALN 406
           SGAVDRIIGRPPPKTGDVVLVADGTEKPIGWG+YNSVSMFCVRLMQL DEATSDS+CALN
Sbjct: 61  SGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGMYNSVSMFCVRLMQLEDEATSDSSCALN 120

Query: 405 VEKLLETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDXXXXXXXXXXV 226
           +EKL+ETRIDAAVE+RRRLGLPSVHTNAYRLINSEGDRLSGLI+DVFG           V
Sbjct: 121 MEKLIETRIDAAVEMRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFGGVAVVASSAAWV 180

Query: 225 EKYKSEIEACIRKINYINHINWRPSIDILKEDGVNVSDLKEMLSSNCPERTKIMENGIVY 46
           EKYKSEIEACI+KINYINH+NWRPS+DILKEDGVN  DL +M SS CPERTKI+EN IVY
Sbjct: 181 EKYKSEIEACIKKINYINHVNWRPSVDILKEDGVNEYDLNKMHSSTCPERTKIVENEIVY 240

Query: 45  TVSLKGQKTGFYADQ 1
           T+SLKGQKTGFYADQ
Sbjct: 241 TISLKGQKTGFYADQ 255


>ref|XP_004139905.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
           [Cucumis sativus] gi|449475849|ref|XP_004154569.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           I-like [Cucumis sativus]
          Length = 439

 Score =  333 bits (853), Expect = 3e-89
 Identities = 169/251 (67%), Positives = 196/251 (78%)
 Frame = -1

Query: 753 MKQLPTLLMKSLSVCSLPTTATTLQEIASHQPXXXXXXXXXXXKTQLFKDGNPMVYSGAV 574
           M+ L + L+KSLS+ S P  A+T+QEIAS  P           K QLFKDG+PMVYSGAV
Sbjct: 1   MQLLQSRLIKSLSISSSPA-ASTIQEIASACPKGLAKVVLKKGKAQLFKDGSPMVYSGAV 59

Query: 573 DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLGDEATSDSACALNVEKL 394
           DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMF VRLMQL +EA  D +C LNVEK+
Sbjct: 60  DRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFSVRLMQLEEEAARDPSCTLNVEKM 119

Query: 393 LETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDXXXXXXXXXXVEKYK 214
           +ETR+  A ELR+ LGLPS  TNAYRL+NSEGDRLSGLI+DVFGD          VEKYK
Sbjct: 120 IETRVHTARELRKNLGLPSASTNAYRLVNSEGDRLSGLIIDVFGDLAVVASSAAWVEKYK 179

Query: 213 SEIEACIRKINYINHINWRPSIDILKEDGVNVSDLKEMLSSNCPERTKIMENGIVYTVSL 34
           +EIE C+R I  INH+ WRPS+DILKE+G++VS+LK+   S CPERTK+MEN I Y +SL
Sbjct: 180 AEIEDCVRGIEEINHVKWRPSVDILKEEGIDVSELKDTSPSTCPERTKVMENDIFYAISL 239

Query: 33  KGQKTGFYADQ 1
           +GQKTGFYADQ
Sbjct: 240 EGQKTGFYADQ 250


>ref|XP_002516422.1| RNA binding protein, putative [Ricinus communis]
           gi|223544457|gb|EEF45977.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  328 bits (842), Expect = 6e-88
 Identities = 167/250 (66%), Positives = 198/250 (79%), Gaps = 1/250 (0%)
 Frame = -1

Query: 747 QLPTLLMKSLSVCSLPTTATTLQEIA-SHQPXXXXXXXXXXXKTQLFKDGNPMVYSGAVD 571
           QLP  L+KSL +CSLP+T   LQEIA  H             KTQLFK+G+PMVYSGAVD
Sbjct: 5   QLPARLVKSLPLCSLPST---LQEIAFPHPTKGIAKVVLKKGKTQLFKEGSPMVYSGAVD 61

Query: 570 RIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLGDEATSDSACALNVEKLL 391
           R+IGRPPPKTGD+V+V DG EKPIGWG++NS SMF VRLMQL +E   D +CALN+EKLL
Sbjct: 62  RVIGRPPPKTGDIVVVTDGAEKPIGWGMFNSKSMFAVRLMQLEEEVLRDPSCALNMEKLL 121

Query: 390 ETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDXXXXXXXXXXVEKYKS 211
            TRIDAA++LRRRLGLPS  TNA+R++NSEGDRLSGLIVDVFGD          VEKYK 
Sbjct: 122 RTRIDAAIQLRRRLGLPSTLTNAFRVVNSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKP 181

Query: 210 EIEACIRKINYINHINWRPSIDILKEDGVNVSDLKEMLSSNCPERTKIMENGIVYTVSLK 31
           E+EACI +++ IN+I+WRPS++ILKE+G+NVSDLKEM  S C ERTK++ENGI Y +SLK
Sbjct: 182 EVEACISRMDEINYISWRPSVEILKEEGINVSDLKEMHPSICHERTKVVENGISYAISLK 241

Query: 30  GQKTGFYADQ 1
           GQKTGFYADQ
Sbjct: 242 GQKTGFYADQ 251


>ref|XP_002315078.1| predicted protein [Populus trichocarpa] gi|222864118|gb|EEF01249.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  313 bits (802), Expect = 3e-83
 Identities = 152/198 (76%), Positives = 172/198 (86%)
 Frame = -1

Query: 594 MVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLGDEATSDSAC 415
           MVYSGAVDRIIGRPPPKTGD+VLVADGTEKPIGWGLYNSVSMFCVRLMQL +EAT D +C
Sbjct: 1   MVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGLYNSVSMFCVRLMQLEEEATRDPSC 60

Query: 414 ALNVEKLLETRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDXXXXXXXX 235
           AL+++KLLETR +AA+ELRRRLGLPS HTNAYRL+NSEGDRLSGLIVDVFGD        
Sbjct: 61  ALDMKKLLETRTNAAIELRRRLGLPSSHTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSA 120

Query: 234 XXVEKYKSEIEACIRKINYINHINWRPSIDILKEDGVNVSDLKEMLSSNCPERTKIMENG 55
             VE YK E+EACI +I+ INHINWRPS+DILKE+G++VSD+KE+  S CPER K+MENG
Sbjct: 121 AWVENYKPEVEACINRIDGINHINWRPSVDILKEEGMDVSDMKEVHPSTCPERIKVMENG 180

Query: 54  IVYTVSLKGQKTGFYADQ 1
           I Y +SL GQKTGFYADQ
Sbjct: 181 ISYAISLVGQKTGFYADQ 198


>ref|NP_974023.1| S-adenosylmethionine-dependent methyltransferase domain-containing
           protein [Arabidopsis thaliana]
           gi|332194958|gb|AEE33079.1|
           S-adenosylmethionine-dependent methyltransferase
           domain-containing protein [Arabidopsis thaliana]
          Length = 454

 Score =  311 bits (796), Expect = 1e-82
 Identities = 157/249 (63%), Positives = 188/249 (75%)
 Frame = -1

Query: 747 QLPTLLMKSLSVCSLPTTATTLQEIASHQPXXXXXXXXXXXKTQLFKDGNPMVYSGAVDR 568
           QLP  L  SL   S         +IAS +P           KTQLFKDG+PMVYSGAVDR
Sbjct: 25  QLPCRLHHSLFYSS--------SQIASSRPQGVAKVVLKKGKTQLFKDGSPMVYSGAVDR 76

Query: 567 IIGRPPPKTGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLGDEATSDSACALNVEKLLE 388
           IIG+PPP+TGDVV+VADGTE PIGWGLYNSVSMFCVRLMQL  E+T D +CALN+EKLL+
Sbjct: 77  IIGKPPPQTGDVVIVADGTENPIGWGLYNSVSMFCVRLMQLQHESTRDPSCALNIEKLLQ 136

Query: 387 TRIDAAVELRRRLGLPSVHTNAYRLINSEGDRLSGLIVDVFGDXXXXXXXXXXVEKYKSE 208
           TRI  AV+LR+ L LPS +TNAYRL+NSEGDRLSGLIVDVFGD          +EKY+ E
Sbjct: 137 TRIAEAVQLRKSLALPSANTNAYRLVNSEGDRLSGLIVDVFGDIAVVASSAAWLEKYRIE 196

Query: 207 IEACIRKINYINHINWRPSIDILKEDGVNVSDLKEMLSSNCPERTKIMENGIVYTVSLKG 28
           +E+C+R I+ INHINWRPS+D+LKEDG ++S LK+  SS  P+R+ ++ENGI Y +SL+G
Sbjct: 197 VESCLRSIDGINHINWRPSLDVLKEDGFDISSLKQTQSSTLPQRSMVVENGISYAISLEG 256

Query: 27  QKTGFYADQ 1
           QKTGFY DQ
Sbjct: 257 QKTGFYTDQ 265


Top