BLASTX nr result

ID: Glycyrrhiza23_contig00020075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020075
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...    95   7e-18
ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-...    94   1e-17
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...    93   2e-17
ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...    86   2e-15
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]              65   7e-09

>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/85 (57%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1    SIRXXXXXXXXXXXXKVHPVRELEELCKKRKY-VIEKNVSREDGVICYRMEVHADGVIHP 177
            SIR            K+HP+REL ELC+KR Y +I ++VSR+DG+  YRMEV ADG+IH 
Sbjct: 1301 SIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIILEDVSRKDGLTYYRMEVEADGIIHK 1360

Query: 178  SEYKGPADRKTAKKLVCKEILKSLQ 252
             EYKG A R TAKK+VCKEIL SL+
Sbjct: 1361 YEYKGDALRDTAKKIVCKEILNSLK 1385


>ref|XP_003546271.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 285

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   SIRXXXXXXXXXXXXKVHPVRELEELCKKRKY-VIEKNVSREDGVICYRMEVHADGVIHP 177
           SIR            K+HP+REL ELC+KR Y ++ ++VSR+DGV  YRME+ ADGVIH 
Sbjct: 197 SIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMELEADGVIHE 256

Query: 178 SEYKGPADRKTAKKLVCKEILKSLQ 252
            EY GPA R TAKK+ CKEIL SL+
Sbjct: 257 YEYTGPALRDTAKKIACKEILNSLK 281


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1    SIRXXXXXXXXXXXXKVHPVRELEELCKKRKY-VIEKNVSREDGVICYRMEVHADGVIHP 177
            SIR            K+HP+REL ELC+KR Y ++ ++VSR+DGV  YRM+V ADGVIH 
Sbjct: 1334 SIRPLLEPLVTPETLKLHPIRELNELCQKRSYKIVLEDVSRKDGVTNYRMKVEADGVIHE 1393

Query: 178  SEYKGPADRKTAKKLVCKEILKSLQ 252
             EY GPA R TAKK+ CKEIL SL+
Sbjct: 1394 YEYTGPALRDTAKKIACKEILNSLK 1418


>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
            gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
            [Medicago truncatula]
          Length = 1418

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/68 (58%), Positives = 49/68 (72%)
 Frame = +1

Query: 49   VHPVRELEELCKKRKYVIEKNVSREDGVICYRMEVHADGVIHPSEYKGPADRKTAKKLVC 228
            +HP+REL ELC+K  Y  EK +SR DGV   ++EV ADGVIH  EYKG  D+KTA +L C
Sbjct: 1349 IHPIRELNELCQKMNYTKEKTLSRNDGVTSCKIEVIADGVIHQFEYKGSTDKKTATRLAC 1408

Query: 229  KEILKSLQ 252
            K +L SLQ
Sbjct: 1409 KGVLHSLQ 1416


>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +1

Query: 46   KVHPVRELEELCKKRKYVIEKN-VSREDGVICYRMEVHADGVIHPSEYKGPADRKTAKKL 222
            K+HPVREL ELC ++ Y+ +KN VSRE+GV    +EV ADGV H        D+K A+K+
Sbjct: 1329 KLHPVRELSELCDQKGYIKKKNVVSRENGVAYITVEVEADGVSHKFTC-SERDKKMAEKV 1387

Query: 223  VCKEILKSLQ 252
             CK +LK L+
Sbjct: 1388 ACKNVLKLLK 1397


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