BLASTX nr result

ID: Glycyrrhiza23_contig00020046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020046
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616555.1| Glucan endo-1,3-beta-glucosidase [Medicago t...   134   1e-29
ref|XP_003518404.1| PREDICTED: probable glucan endo-1,3-beta-glu...   102   3e-20
ref|XP_004167861.1| PREDICTED: probable glucan endo-1,3-beta-glu...    94   1e-17
ref|XP_004150241.1| PREDICTED: probable glucan endo-1,3-beta-glu...    94   1e-17
ref|XP_002316237.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17

>ref|XP_003616555.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula]
           gi|355517890|gb|AES99513.1| Glucan
           endo-1,3-beta-glucosidase [Medicago truncatula]
          Length = 440

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/77 (80%), Positives = 71/77 (92%)
 Frame = +2

Query: 5   RSSIAPPPPDRISGAMEDLKLTSLRLEEPDPAIIRSLLYTNVSLFLTIPNYLVTPMATNR 184
           + S  PP PDRI+ AM++LKLT LRLEEPDP+IIRSLLYTN+SLFLTIPNYLVTP+ATNR
Sbjct: 36  QDSPPPPSPDRITTAMQNLKLTHLRLEEPDPSIIRSLLYTNISLFLTIPNYLVTPIATNR 95

Query: 185 SVARAWVYTHVLPFYPR 235
           S+ARAW+YTHVLPFYPR
Sbjct: 96  SIARAWIYTHVLPFYPR 112


>ref|XP_003518404.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like
           [Glycine max]
          Length = 359

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/71 (64%), Positives = 58/71 (81%)
 Frame = +2

Query: 23  PPPDRISGAMEDLKLTSLRLEEPDPAIIRSLLYTNVSLFLTIPNYLVTPMATNRSVARAW 202
           P P+RI+  +  L   SLRLE+ DPAI RSLLY+N +LFLTIPNY+VT +A NRSVA++W
Sbjct: 25  PSPERIAAGLRHLNARSLRLEDADPAITRSLLYSNTTLFLTIPNYMVTSIAQNRSVAQSW 84

Query: 203 VYTHVLPFYPR 235
           +YTHV+PFYPR
Sbjct: 85  LYTHVVPFYPR 95


>ref|XP_004167861.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like
           [Cucumis sativus]
          Length = 382

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = +2

Query: 26  PPDRISGAMEDLKLTSLRLEEPDPAIIRSLLYTNVSLFLTIPNYLVTPMATNRSVARAWV 205
           PPD +  A++ LKLT++RLE+ DP +IR+  YTN++L LTIPN +V+P+A NRS A  W+
Sbjct: 45  PPDSVPKAIDSLKLTAVRLEDSDPNVIRAFAYTNITLLLTIPNSMVSPIAANRSAALQWL 104

Query: 206 YTHVLPFYPR 235
           Y HV+PFYPR
Sbjct: 105 YIHVVPFYPR 114


>ref|XP_004150241.1| PREDICTED: probable glucan endo-1,3-beta-glucosidase A6-like
           [Cucumis sativus]
          Length = 382

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/70 (57%), Positives = 55/70 (78%)
 Frame = +2

Query: 26  PPDRISGAMEDLKLTSLRLEEPDPAIIRSLLYTNVSLFLTIPNYLVTPMATNRSVARAWV 205
           PPD +  A++ LKLT++RLE+ DP +IR+  YTN++L LTIPN +V+P+A NRS A  W+
Sbjct: 45  PPDSVPKAIDSLKLTAVRLEDSDPNVIRAFAYTNITLLLTIPNSMVSPIAANRSAALQWL 104

Query: 206 YTHVLPFYPR 235
           Y HV+PFYPR
Sbjct: 105 YIHVVPFYPR 114


>ref|XP_002316237.1| predicted protein [Populus trichocarpa] gi|222865277|gb|EEF02408.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = +2

Query: 8   SSIAPPPPDRISGAMEDLKLTSLRLEEPDPAIIRSLLYTNVSLFLTIPNYLVTPMATNRS 187
           SS    P DR+  A+  L + SLRL  PDP +IRS  +TN SLFL+IPN L+ P+A NRS
Sbjct: 54  SSTPSLPADRVLSALSSLNIHSLRLPNPDPNLIRSFAFTNTSLFLSIPNSLLPPLAANRS 113

Query: 188 VARAWVYTHVLPFYPR 235
           +A  W+Y HVLPFYPR
Sbjct: 114 LAARWLYGHVLPFYPR 129


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