BLASTX nr result

ID: Glycyrrhiza23_contig00020039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020039
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...   130   8e-29
ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic su...   117   1e-24
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   109   2e-22
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...    97   2e-18

>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/68 (92%), Positives = 65/68 (95%)
 Frame = +2

Query: 2   LYKQLSYFCHVFDTVCSIEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVK 181
           LYKQLSYFCHVFDTVC IEKMEAKSRIPIEKELIKIRP+VD+AAST QKIRDRCAFGWVK
Sbjct: 544 LYKQLSYFCHVFDTVCYIEKMEAKSRIPIEKELIKIRPIVDLAASTIQKIRDRCAFGWVK 603

Query: 182 LQDLVVTI 205
           LQDLVV I
Sbjct: 604 LQDLVVAI 611


>ref|XP_003517307.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Glycine max]
          Length = 1512

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/68 (82%), Positives = 63/68 (92%)
 Frame = +2

Query: 2    LYKQLSYFCHVFDTVCSIEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVK 181
            LYKQLSYFCHVFDTV  IEKMEAKSRIPIEKELIKIR V+  AASTAQ+IRDRCAFGWVK
Sbjct: 1445 LYKQLSYFCHVFDTVSCIEKMEAKSRIPIEKELIKIRAVIKSAASTAQEIRDRCAFGWVK 1504

Query: 182  LQDLVVTI 205
            L++LV+++
Sbjct: 1505 LENLVISV 1512


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +2

Query: 2    LYKQLSYFCHVFDTVCSIEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVK 181
            LYKQLSYFCHV DTV  IEKME  +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+
Sbjct: 1455 LYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQ 1514

Query: 182  LQDLVVTI 205
            L DL VT+
Sbjct: 1515 LDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +2

Query: 2    LYKQLSYFCHVFDTVCSIEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVK 181
            LYKQLSYFCHV DTV  IEKME  +RIPIEKEL +IRP+V++AAST QKIRDRCA+GWV+
Sbjct: 1494 LYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGWVQ 1553

Query: 182  LQDLVVTI 205
            L DL VT+
Sbjct: 1554 LDDLTVTV 1561


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 43/68 (63%), Positives = 58/68 (85%)
 Frame = +2

Query: 2    LYKQLSYFCHVFDTVCSIEKMEAKSRIPIEKELIKIRPVVDVAASTAQKIRDRCAFGWVK 181
            LYKQLS++C++ DTV  +EKM+A +RI +EK++ KIRP+VD+A ST QKIRDRCA+GWV+
Sbjct: 1459 LYKQLSFYCYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDLAVSTVQKIRDRCAYGWVQ 1518

Query: 182  LQDLVVTI 205
            L DL VT+
Sbjct: 1519 LSDLSVTV 1526


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