BLASTX nr result

ID: Glycyrrhiza23_contig00020038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020038
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551888.1| PREDICTED: 60S ribosomal protein L19, mitoch...   242   7e-62
ref|XP_003538572.1| PREDICTED: 60S ribosomal protein L19, mitoch...   241   1e-61
ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitoch...   222   5e-56
ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus...   221   9e-56
ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|1...   215   9e-54

>ref|XP_003551888.1| PREDICTED: 60S ribosomal protein L19, mitochondrial-like [Glycine
           max]
          Length = 149

 Score =  242 bits (617), Expect = 7e-62
 Identities = 124/149 (83%), Positives = 132/149 (88%)
 Frame = -1

Query: 696 MSVPKAIAATIRLTVXXXXXXXXXXXXXXXGQYRLNLMAFCKDFNARTQKYKADTPMAVT 517
           MSVPKA+AATIRLTV               GQYRLNLMAFCKDFNARTQKYKA+TPMAVT
Sbjct: 1   MSVPKAVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKAETPMAVT 60

Query: 516 ITAFKDNTFEFTVKSPSVAWYLKKAAGVESGSSRPGHVTASTLSVRHVYEIAKVKQSDPY 337
           ITA+KDNTFEFTVKSP V+WYLKKAAGVESGSSRPGHVTAS+LSVRHV+EIAK KQSDPY
Sbjct: 61  ITAYKDNTFEFTVKSPPVSWYLKKAAGVESGSSRPGHVTASSLSVRHVHEIAKAKQSDPY 120

Query: 336 LQNMPLESISKTIIGTANSMGIKIVKELD 250
           LQNMPLESISK+IIGTANSMGIKIVK+LD
Sbjct: 121 LQNMPLESISKSIIGTANSMGIKIVKDLD 149


>ref|XP_003538572.1| PREDICTED: 60S ribosomal protein L19, mitochondrial-like [Glycine
           max]
          Length = 149

 Score =  241 bits (614), Expect = 1e-61
 Identities = 122/149 (81%), Positives = 131/149 (87%)
 Frame = -1

Query: 696 MSVPKAIAATIRLTVXXXXXXXXXXXXXXXGQYRLNLMAFCKDFNARTQKYKADTPMAVT 517
           MS+PKA+AATIRLTV               GQYRLNLMAFCKDFNARTQKYKADTPMAVT
Sbjct: 1   MSIPKAVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKADTPMAVT 60

Query: 516 ITAFKDNTFEFTVKSPSVAWYLKKAAGVESGSSRPGHVTASTLSVRHVYEIAKVKQSDPY 337
           ITA+KDNTFEF VKSP V+WYLKKAAGVESGSSRPGHVT+S++SVRHVYEIAK KQSDPY
Sbjct: 61  ITAYKDNTFEFAVKSPPVSWYLKKAAGVESGSSRPGHVTSSSVSVRHVYEIAKAKQSDPY 120

Query: 336 LQNMPLESISKTIIGTANSMGIKIVKELD 250
           LQNMPLESISK+IIGTANSMGIKIVK+LD
Sbjct: 121 LQNMPLESISKSIIGTANSMGIKIVKDLD 149


>ref|XP_004142176.1| PREDICTED: 54S ribosomal protein L19, mitochondrial-like [Cucumis
           sativus] gi|449503431|ref|XP_004161999.1| PREDICTED: 54S
           ribosomal protein L19, mitochondrial-like [Cucumis
           sativus]
          Length = 155

 Score =  222 bits (566), Expect = 5e-56
 Identities = 112/145 (77%), Positives = 122/145 (84%)
 Frame = -1

Query: 684 KAIAATIRLTVXXXXXXXXXXXXXXXGQYRLNLMAFCKDFNARTQKYKADTPMAVTITAF 505
           + +AATIRLTV               GQYRLNLMAFCKDFNARTQKYK +TPMAVTITAF
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPETPMAVTITAF 70

Query: 504 KDNTFEFTVKSPSVAWYLKKAAGVESGSSRPGHVTASTLSVRHVYEIAKVKQSDPYLQNM 325
           KDNTFEFTVKSPSV WYLKKAAG+ESGSSRPGHV ASTLSV+H+YEIAKVKQSDPY Q M
Sbjct: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTLSVKHIYEIAKVKQSDPYCQYM 130

Query: 324 PLESISKTIIGTANSMGIKIVKELD 250
           PLESI K+IIGTANSMGIK++ EL+
Sbjct: 131 PLESICKSIIGTANSMGIKVLNELE 155


>ref|XP_002521730.1| 50S robosomal protein L11, putative [Ricinus communis]
           gi|223539121|gb|EEF40717.1| 50S robosomal protein L11,
           putative [Ricinus communis]
          Length = 155

 Score =  221 bits (564), Expect = 9e-56
 Identities = 111/145 (76%), Positives = 123/145 (84%)
 Frame = -1

Query: 684 KAIAATIRLTVXXXXXXXXXXXXXXXGQYRLNLMAFCKDFNARTQKYKADTPMAVTITAF 505
           + +AATIRLTV               GQYRLNLMAFCKDFNARTQKYK DTPMAVTITAF
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAF 70

Query: 504 KDNTFEFTVKSPSVAWYLKKAAGVESGSSRPGHVTASTLSVRHVYEIAKVKQSDPYLQNM 325
           KDNTFEFTVKSPSV WYLKKAAG+ESGSSRPGHV AST++++HVYEIAKVKQSDPY Q M
Sbjct: 71  KDNTFEFTVKSPSVTWYLKKAAGIESGSSRPGHVVASTVTLKHVYEIAKVKQSDPYCQYM 130

Query: 324 PLESISKTIIGTANSMGIKIVKELD 250
            LESISK++IGTAN+MGIK+VK+LD
Sbjct: 131 SLESISKSVIGTANAMGIKVVKDLD 155


>ref|XP_002304331.1| predicted protein [Populus trichocarpa] gi|118482503|gb|ABK93174.1|
           unknown [Populus trichocarpa]
           gi|222841763|gb|EEE79310.1| predicted protein [Populus
           trichocarpa]
          Length = 155

 Score =  215 bits (547), Expect = 9e-54
 Identities = 108/145 (74%), Positives = 121/145 (83%)
 Frame = -1

Query: 684 KAIAATIRLTVXXXXXXXXXXXXXXXGQYRLNLMAFCKDFNARTQKYKADTPMAVTITAF 505
           + +AATIRLTV               GQYRLNLMAFCKDFNARTQKYK DTPM+VTITAF
Sbjct: 11  RPVAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMSVTITAF 70

Query: 504 KDNTFEFTVKSPSVAWYLKKAAGVESGSSRPGHVTASTLSVRHVYEIAKVKQSDPYLQNM 325
           KDNTFEFTVKSPSV WYLKKAAGVESGS RPGH+ AST++++HVYEIAKVKQSDPY Q M
Sbjct: 71  KDNTFEFTVKSPSVTWYLKKAAGVESGSGRPGHLEASTVTLKHVYEIAKVKQSDPYCQYM 130

Query: 324 PLESISKTIIGTANSMGIKIVKELD 250
            LESI K+I+GTAN+MGIK+VK+LD
Sbjct: 131 SLESICKSIMGTANTMGIKVVKDLD 155


Top