BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020022
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   381   e-103
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   305   2e-80
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   280   6e-73
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   276   8e-72
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        254   2e-65

>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  381 bits (978), Expect = e-103
 Identities = 207/255 (81%), Positives = 221/255 (86%)
 Frame = +3

Query: 3    ASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTGYSLVIIDELGRGTST 182
            ASSAKLHVLDRIYTRMGASDSIQ GRSTFLEELSETSHIL+SCT +SLVIIDELGRGTST
Sbjct: 819  ASSAKLHVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVIIDELGRGTST 878

Query: 183  HDGMAIAYATLHYLLKQKKCIVLFVTHYPKIADLGTEFPGLVAAYHVSHLTSHDHASKNS 362
            HDGMAIA+ATLHYLLKQK+ +VLFVTHYPKIA L TEFPG VAAYHVSHL SHD ASKNS
Sbjct: 879  HDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHD-ASKNS 937

Query: 363  NSNHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHSRLG 542
            N +H DVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVN+RIH R  
Sbjct: 938  NLDH-DVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRST 996

Query: 543  KEMLLDAPVIDQEQEPHQLMAQPHDCQRQEFCRAYKEFYSNLKAAILDDDHAKSFQLLEN 722
            KE+LLD  VI QE+E  QLMAQ  D   +EF  AYK+FY NLKAA  DDD AKSF LLE+
Sbjct: 997  KELLLDTLVIGQEKE--QLMAQSLDRPHKEFDMAYKDFYLNLKAATEDDDWAKSFHLLEH 1054

Query: 723  ARNIAKKLIDQCSLY 767
            AR+IAKKLI +   Y
Sbjct: 1055 ARSIAKKLIGRSMQY 1069


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  305 bits (780), Expect = 2e-80
 Identities = 169/257 (65%), Positives = 201/257 (78%), Gaps = 8/257 (3%)
 Frame = +3

Query: 3    ASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTGYSLVIIDELGRGTST 182
            ASSAKLHVLD IYTRMGASDSIQQGRSTFLEELSETSHIL  CTGYSLVIIDELGRGTST
Sbjct: 843  ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILRKCTGYSLVIIDELGRGTST 902

Query: 183  HDGMAIAYATLHYLLKQKKCIVLFVTHYPKIADLGTEFPGLVAAYHVSHLTSH-DHASKN 359
            HDG AIAYATL +LL+QK+C+VLFVTHYPKIA++ T F   V AYHVS+L +  ++ + +
Sbjct: 903  HDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEKNNDATD 962

Query: 360  SNSNHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHSRL 539
            S  ++EDVTYLYKLVPGVSERSFGFKVAQLAQLP+ CI RA VMA++LE  ++ RI +RL
Sbjct: 963  SKFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCRIRNRL 1022

Query: 540  GKEMLLDAPVIDQEQEPHQLMAQP----HDCQ---RQEFCRAYKEFYSNLKAAILDDDHA 698
             K  LL A  IDQ QE  + + +     HD +    +E    Y++F+ N K+A+L DD A
Sbjct: 1023 DKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFFLNFKSALLGDD-A 1081

Query: 699  KSFQLLENARNIAKKLI 749
            KSFQ LENAR+IA+ LI
Sbjct: 1082 KSFQYLENARSIARALI 1098


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  280 bits (715), Expect = 6e-73
 Identities = 157/267 (58%), Positives = 191/267 (71%), Gaps = 18/267 (6%)
 Frame = +3

Query: 3    ASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTGYSLVIIDELGRGTST 182
            ASSAKL VLD I+TRMG+SDSIQQGRSTFLEELSE SHI+H+CT  SLVIIDELGRGTST
Sbjct: 852  ASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVIIDELGRGTST 911

Query: 183  HDGMAIAYATLHYLLKQKKCIVLFVTHYPKIADLGTEFPGLVAAYHVSHL---------T 335
            HDG+AIAYATLHYLL+ K+C+VLFVTHYPKI D+  EFPG V AYHVS++         T
Sbjct: 912  HDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRAMDMDT 971

Query: 336  SHDHASKNSNSN-----HEDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASK 500
              D     S+ N     HEDVTYLYKLVPGVSERSFGFKVAQLAQLPS CI RA VMA++
Sbjct: 972  DTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRANVMAAE 1031

Query: 501  LEALVNNRIHSRLGKEMLLDAPVIDQEQEPHQLMAQPHDCQRQEFC----RAYKEFYSNL 668
            LEA++ +R+ +   ++ L         Q   Q ++    C R E       A +EF+ +L
Sbjct: 1032 LEAMIVSRVKNSSAQKTL---------QGSQQSISIQSGCSRAEQIGLEEDACREFFLDL 1082

Query: 669  KAAILDDDHAKSFQLLENARNIAKKLI 749
            K+A+ + D  +S Q L++AR+IAK+LI
Sbjct: 1083 KSALGNADPERSLQFLKHARSIAKELI 1109


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  276 bits (705), Expect = 8e-72
 Identities = 154/252 (61%), Positives = 188/252 (74%), Gaps = 3/252 (1%)
 Frame = +3

Query: 3    ASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTGYSLVIIDELGRGTST 182
            A SAKLHVLD IYTRMGASDSIQQGRSTFLEEL++           SLVIIDELGRGTST
Sbjct: 854  ALSAKLHVLDGIYTRMGASDSIQQGRSTFLEELTQ-----------SLVIIDELGRGTST 902

Query: 183  HDGMAIAYATLHYLLKQKKCIVLFVTHYPKIADLGTEFPGLVAAYHVSHLTSH-DHASKN 359
            +DG AIAYATL++LL QK+C+VLFVTHYPKI ++ TEFPG V AYHVS+LTS     +  
Sbjct: 903  YDGEAIAYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGAYHVSYLTSEKSEGAIE 962

Query: 360  SNSNHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNNRIHSRL 539
            S  + EDVTYLYKLVPGVSE+SFGFKVAQLA+LP  CI RA +MA++LEA+++    SRL
Sbjct: 963  STCDTEDVTYLYKLVPGVSEKSFGFKVAQLAELPPSCIRRATIMAARLEAVLS----SRL 1018

Query: 540  GKEMLLDA-PVIDQEQEPHQLMAQPHDCQRQEFCR-AYKEFYSNLKAAILDDDHAKSFQL 713
            G E LL+  PV  QE+    ++      ++ E    AY+EF+SNLK+A+ DDD A+S Q 
Sbjct: 1019 GNEQLLETLPVQQQEEAQENMLRSDVRIEKSEDSTVAYREFFSNLKSAMFDDDVARSSQF 1078

Query: 714  LENARNIAKKLI 749
            LE AR+IAK+ +
Sbjct: 1079 LEKARSIAKEFL 1090


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  254 bits (650), Expect = 2e-65
 Identities = 145/268 (54%), Positives = 181/268 (67%), Gaps = 17/268 (6%)
 Frame = +3

Query: 3    ASSAKLHVLDRIYTRMGASDSIQQGRSTFLEELSETSHILHSCTGYSLVIIDELGRGTST 182
            A SAKLHVLD IYTRMGASDSIQQGRSTFLEELSE S IL  C+  SLVI+DELGRGTST
Sbjct: 580  AFSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSEASDILKKCSASSLVILDELGRGTST 639

Query: 183  HDGMAIAYATLHYLLKQKKCIVLFVTHYPKIADLGTEFPGLVAAYHVSHLTSHDHASKNS 362
            HDG+AIA+ATL YLL+ KKC+VLFVTHYP+I  +  EFPG V  YHVS+LTS    + + 
Sbjct: 640  HDGVAIAFATLQYLLEHKKCMVLFVTHYPEIVSVKNEFPGSVGPYHVSYLTSQGDVTGDC 699

Query: 363  NSNH-------EDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALV-N 518
             SN        ED+TYLYKL PGV+ERSFGFKVAQLAQLP  CI RAIV+A +LEA V N
Sbjct: 700  RSNEKMNYINSEDITYLYKLAPGVAERSFGFKVAQLAQLPVACIQRAIVIAGRLEAAVCN 759

Query: 519  NRIHSRLGKEMLLD--------APVIDQEQEPHQLMAQPHDCQRQEFCRAYKEFYSNLKA 674
                SR+ +   ++        +  +D   EP+   A   +C        Y+E + N+  
Sbjct: 760  YTEQSRIRRSYSINYRQDGCKSSEPVDDVLEPYLSSAGSVNC-IDNSSELYRELFLNINF 818

Query: 675  AILDDDHA-KSFQLLENARNIAKKLIDQ 755
            A+L+++   + FQ L  A+++A +LI +
Sbjct: 819  ALLEENGGDRRFQFLMQAKSLAAQLISR 846