BLASTX nr result

ID: Glycyrrhiza23_contig00020004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00020004
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546711.1| PREDICTED: U-box domain-containing protein 1...    84   9e-15
ref|XP_003542817.1| PREDICTED: U-box domain-containing protein 1...    82   3e-14
ref|XP_003627885.1| U-box domain-containing protein [Medicago tr...    82   6e-14
ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4...    60   1e-07
ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07

>ref|XP_003546711.1| PREDICTED: U-box domain-containing protein 11-like [Glycine max]
          Length = 325

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 49/75 (65%), Positives = 54/75 (72%)
 Frame = -1

Query: 230 ATGASMRTKENAVSALLNLVRCXXXXXXXXXXXXXXXXALDGIADVRDKGSSKGKSKATD 51
           AT ASMRTKENAVSALLNLVRC                ALDGIADVRD GS KGK+KA +
Sbjct: 233 ATAASMRTKENAVSALLNLVRCGGDKVAADVRDAVAFGALDGIADVRDGGSGKGKNKAAE 292

Query: 50  LLKVLLGDNSHGNVV 6
           LLKVLLG+N +G+VV
Sbjct: 293 LLKVLLGEN-NGDVV 306


>ref|XP_003542817.1| PREDICTED: U-box domain-containing protein 11-like [Glycine max]
          Length = 326

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/76 (63%), Positives = 54/76 (71%)
 Frame = -1

Query: 230 ATGASMRTKENAVSALLNLVRCXXXXXXXXXXXXXXXXALDGIADVRDKGSSKGKSKATD 51
           AT ASMRTKENAVSALLNLVRC                ALDGIADVRD GS KGK+KA +
Sbjct: 234 ATAASMRTKENAVSALLNLVRCGGDKVAADVRDVVAFGALDGIADVRDGGSVKGKNKAAE 293

Query: 50  LLKVLLGDNSHGNVVL 3
           L+KVLLG N +G+VV+
Sbjct: 294 LMKVLLGQN-NGDVVV 308


>ref|XP_003627885.1| U-box domain-containing protein [Medicago truncatula]
           gi|355521907|gb|AET02361.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 372

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
 Frame = -1

Query: 230 ATGASMRTKENAVSALLNLVRCXXXXXXXXXXXXXXXXALDGIADVRDKGSSKGKSKATD 51
           ATG+SMRT+ENAVSALLNLVRC                A+DGIADV+DKGS KG+SKA +
Sbjct: 266 ATGSSMRTRENAVSALLNLVRCGGDVVAGDVRDAVAFGAMDGIADVKDKGSVKGQSKAME 325

Query: 50  LLKVLLGD-NSHGNV 9
           L++V++GD  SHG+V
Sbjct: 326 LMRVMVGDVRSHGDV 340


>ref|XP_003523961.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 325

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/71 (52%), Positives = 42/71 (59%)
 Frame = -1

Query: 218 SMRTKENAVSALLNLVRCXXXXXXXXXXXXXXXXALDGIADVRDKGSSKGKSKATDLLKV 39
           S+RTKENAV+ALLNLVRC                 LDGIA V++ GS KGKSKA    K+
Sbjct: 241 SLRTKENAVAALLNLVRCGSERVFREVRDKVGG--LDGIAYVQEHGSPKGKSKAVAFFKL 298

Query: 38  LLGDNSHGNVV 6
           LL   S G VV
Sbjct: 299 LLDGGSSGEVV 309


>ref|XP_002513039.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548050|gb|EEF49542.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 310

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/70 (48%), Positives = 45/70 (64%)
 Frame = -1

Query: 230 ATGASMRTKENAVSALLNLVRCXXXXXXXXXXXXXXXXALDGIADVRDKGSSKGKSKATD 51
           ATG+S+R KENAVSALLNLVRC                 ++GI +V + G+SKGK+KA  
Sbjct: 231 ATGSSLRIKENAVSALLNLVRC-GGERVAADVRDMAAIVVEGIKEVAENGTSKGKAKAVA 289

Query: 50  LLKVLLGDNS 21
           L+KV+ G +S
Sbjct: 290 LVKVIEGGSS 299


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