BLASTX nr result

ID: Glycyrrhiza23_contig00019975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019975
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...    89   5e-16
emb|CBI16387.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...    89   5e-16
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding prote...    87   1e-15

>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 438

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/46 (91%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 GFVKFSDESERNRAMTEMNGVYCSTRPMRISAATPKKTTAFQHPYA 2
           GFVKFSDE ERNRAMTEMNGVYCSTRPMRISAATPKKTT FQ  YA
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYA 224



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 408 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 286
           IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRA YPSVRG
Sbjct: 123 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRG 163


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/46 (91%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 GFVKFSDESERNRAMTEMNGVYCSTRPMRISAATPKKTTAFQHPYA 2
           GFVKFSDE ERNRAMTEMNGVYCSTRPMRISAATPKKTT FQ  YA
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYA 224



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 408 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 286
           IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRA YPSVRG
Sbjct: 123 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRG 163


>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 447

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/46 (91%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 GFVKFSDESERNRAMTEMNGVYCSTRPMRISAATPKKTTAFQHPYA 2
           GFVKFSDE ERNRAMTEMNGVYCSTRPMRISAATPKKTT FQ  YA
Sbjct: 179 GFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYA 224



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 408 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 286
           IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRA YPSVRG
Sbjct: 123 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRG 163


>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 408 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 286
           IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFR HYPSVRG
Sbjct: 102 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRG 142



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 139 GFVKFSDESERNRAMTEMNGVYCSTRPMRISAATPKKTTAFQHPYA 2
           GFVKF+DE+ERNRAMTEMNGV+CSTRPMRIS ATPKKTT+FQ  YA
Sbjct: 158 GFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTSFQQQYA 203


>ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Glycine max]
          Length = 410

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 40/41 (97%), Positives = 40/41 (97%)
 Frame = -1

Query: 408 IGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 286
           IGERRPDA PEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG
Sbjct: 96  IGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRG 136



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/47 (87%), Positives = 43/47 (91%), Gaps = 1/47 (2%)
 Frame = -3

Query: 139 GFVKFSDESERNRAMTEMNGVYCSTRPMRISAATPKKTT-AFQHPYA 2
           GFVKFSDE+ERNRAMTEMNGVYCSTRPMRISAATPKKTT A+  P A
Sbjct: 152 GFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGAYAAPAA 198


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