BLASTX nr result

ID: Glycyrrhiza23_contig00019925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019925
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   264   5e-69
ref|XP_003544214.1| PREDICTED: ribosomal RNA large subunit methy...   249   2e-64
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   245   2e-63
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   239   2e-61
ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   238   4e-61

>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  264 bits (675), Expect = 5e-69
 Identities = 132/145 (91%), Positives = 136/145 (93%)
 Frame = -3

Query: 437 SGAPDFYYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGP 258
           SGAPDF+YKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGP
Sbjct: 4   SGAPDFFYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGP 63

Query: 257 LRLGGSVLGIDHKKVKVPPLHCDSRVHTISADVMTLPKHQLTALSPQQKGFSVILSDMCP 78
              GGSVLGIDHKKVKVP  HCDSRV T++ADVMTLPK QL  LSP+QKGFSVILSDMCP
Sbjct: 64  FHNGGSVLGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSDMCP 123

Query: 77  LVSGITTKDAALSFELGMRALDLAV 3
           LVSGITTKDAALSFELGMRALDLAV
Sbjct: 124 LVSGITTKDAALSFELGMRALDLAV 148


>ref|XP_003544214.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Glycine max]
          Length = 221

 Score =  249 bits (635), Expect = 2e-64
 Identities = 122/144 (84%), Positives = 131/144 (90%)
 Frame = -3

Query: 434 GAPDFYYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLGPL 255
           G  DF+YKEAQRLGYVARSAFKL+QIQ QHK+I PGSS+LDLGCAPG WLQVACQSLGP 
Sbjct: 5   GTADFFYKEAQRLGYVARSAFKLLQIQNQHKIISPGSSILDLGCAPGGWLQVACQSLGPF 64

Query: 254 RLGGSVLGIDHKKVKVPPLHCDSRVHTISADVMTLPKHQLTALSPQQKGFSVILSDMCPL 75
           R GGSVLG+D KKVKVPPLHCDSRV TISADV TLP  +L ALSP++KGFSVILSDMCPL
Sbjct: 65  RGGGSVLGVDTKKVKVPPLHCDSRVQTISADVTTLPHQRLKALSPKEKGFSVILSDMCPL 124

Query: 74  VSGITTKDAALSFELGMRALDLAV 3
           VSGITTKDAALSFELGMRALDLA+
Sbjct: 125 VSGITTKDAALSFELGMRALDLAL 148


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  245 bits (626), Expect = 2e-63
 Identities = 119/146 (81%), Positives = 136/146 (93%)
 Frame = -3

Query: 440 GSGAPDFYYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLG 261
           G+G PDF+Y+EAQRLGYVARSAFKL+QIQK+HKLI PGSSVLDLGCAPG+WLQVACQSLG
Sbjct: 3   GAGTPDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQSLG 62

Query: 260 PLRLGGSVLGIDHKKVKVPPLHCDSRVHTISADVMTLPKHQLTALSPQQKGFSVILSDMC 81
           PL+ GG+V+GID KKVKVPPL+CDSRV T+ ADVM LPK+Q+ ALSP+QKGFSV+LSDMC
Sbjct: 63  PLKNGGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMC 122

Query: 80  PLVSGITTKDAALSFELGMRALDLAV 3
           PLVSGITT+DAALS ELGM+AL LAV
Sbjct: 123 PLVSGITTRDAALSAELGMQALGLAV 148


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  239 bits (609), Expect = 2e-61
 Identities = 117/146 (80%), Positives = 133/146 (91%)
 Frame = -3

Query: 440 GSGAPDFYYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLG 261
           G+GAPDF+Y+EAQRLGYVARSAFKL+QIQKQHKLI PGSSVLDLGCAPG+WLQVACQSLG
Sbjct: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQSLG 62

Query: 260 PLRLGGSVLGIDHKKVKVPPLHCDSRVHTISADVMTLPKHQLTALSPQQKGFSVILSDMC 81
           PL+ GGSV+GID KKVKVP  +CD+RV T+ ADVM LP+ Q+ ALS QQKGFSV+LSDMC
Sbjct: 63  PLKNGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMC 122

Query: 80  PLVSGITTKDAALSFELGMRALDLAV 3
           P VSGITTKDAALS ELGM+ALD+A+
Sbjct: 123 PPVSGITTKDAALSMELGMQALDIAI 148


>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  238 bits (607), Expect = 4e-61
 Identities = 116/146 (79%), Positives = 131/146 (89%)
 Frame = -3

Query: 440 GSGAPDFYYKEAQRLGYVARSAFKLVQIQKQHKLIKPGSSVLDLGCAPGSWLQVACQSLG 261
           G+G PDF+Y+EAQRLGY ARSAFKL+Q+QKQ+KLIKPGSSVLDLGCAPG+WLQVACQSLG
Sbjct: 3   GAGTPDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLG 62

Query: 260 PLRLGGSVLGIDHKKVKVPPLHCDSRVHTISADVMTLPKHQLTALSPQQKGFSVILSDMC 81
           PL+ GG V+GID KKVKVP +HCDSRV T+ ADVM LPK ++ A SPQ+KGFSVILSDMC
Sbjct: 63  PLKNGGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMC 122

Query: 80  PLVSGITTKDAALSFELGMRALDLAV 3
           PLVSGITTKDA LS ELGM+AL LAV
Sbjct: 123 PLVSGITTKDAVLSAELGMQALHLAV 148


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