BLASTX nr result

ID: Glycyrrhiza23_contig00019879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019879
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R...   359   3e-97
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   345   5e-93
ref|XP_003524465.1| PREDICTED: putative DEAD-box ATP-dependent R...   342   6e-92
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   323   2e-86
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   310   1e-82

>ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Glycine max]
          Length = 707

 Score =  359 bits (922), Expect = 3e-97
 Identities = 188/237 (79%), Positives = 205/237 (86%), Gaps = 4/237 (1%)
 Frame = -3

Query: 701 SIASLGKYDVKREKRVMPKPYDEDADFSEQVELIKYQLNKRKLSQSEDHHGEEQH----N 534
           S ASLG+YDVKRE+RV+PK        S +VE I+YQLNKRKLSQ E+   +EQ     +
Sbjct: 181 SSASLGEYDVKRERRVVPKT-------SPEVEFIRYQLNKRKLSQIEEQQSQEQQQSNES 233

Query: 533 ILSQTRFDECAISPLTIKALSLAGYIHMTRVQETSLPICLQGMDASVKAKTGTGKSAAFL 354
           ILS TRFDEC ISPLT+KALS AGY+ MTR+QE SLPICL+GMDA VKAKTGTGKS AFL
Sbjct: 234 ILSNTRFDECGISPLTVKALSSAGYVQMTRIQEASLPICLEGMDALVKAKTGTGKSVAFL 293

Query: 353 LPAIETAVKAMTSNTSQRVPPILVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGV 174
           LPAIET +KAM+SNTSQRVPPI VLILCPTRELASQIAA AKVLLKYH+ IGVQTLVGG+
Sbjct: 294 LPAIETVLKAMSSNTSQRVPPIYVLILCPTRELASQIAAVAKVLLKYHETIGVQTLVGGI 353

Query: 173 RFKVDQKRLESDPCQILVATPGRLLDHIENKSGISARLMGLQMLVLDEADHLLDLGF 3
           RFKVDQKRLESDPCQILVATPGRLLDHIENKSGIS RLMGL+MLVLDEADHLLDLGF
Sbjct: 354 RFKVDQKRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRMLVLDEADHLLDLGF 410


>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  345 bits (885), Expect = 5e-93
 Identities = 173/233 (74%), Positives = 200/233 (85%)
 Frame = -3

Query: 701 SIASLGKYDVKREKRVMPKPYDEDADFSEQVELIKYQLNKRKLSQSEDHHGEEQHNILSQ 522
           S A+LGKYDVK ++RVMPK  DE  DFSEQ+ELI+++L+++ L++ E+   EE  +ILSQ
Sbjct: 227 SSAALGKYDVKIKRRVMPKSIDEGDDFSEQIELIRHELSRKNLAEEEEKGDEE--SILSQ 284

Query: 521 TRFDECAISPLTIKALSLAGYIHMTRVQETSLPICLQGMDASVKAKTGTGKSAAFLLPAI 342
            RFDEC +SPLT+KALS AGY+ MTRVQE +L +CL+G DA VKAKTGTGKSAAFLLPAI
Sbjct: 285 KRFDECGVSPLTVKALSSAGYVQMTRVQEATLDVCLEGKDALVKAKTGTGKSAAFLLPAI 344

Query: 341 ETAVKAMTSNTSQRVPPILVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGVRFKV 162
           E  +KA +SN  QRVPPILVLILCPTRE+ASQIAAEA V+LKYHDGIGVQTL+GG RFK 
Sbjct: 345 EAVLKATSSNRIQRVPPILVLILCPTREIASQIAAEANVMLKYHDGIGVQTLIGGTRFKF 404

Query: 161 DQKRLESDPCQILVATPGRLLDHIENKSGISARLMGLQMLVLDEADHLLDLGF 3
           DQKRLESDPCQI+VATPGRLLDHIENK   S RLMGL+MLVLDEADHLLDLGF
Sbjct: 405 DQKRLESDPCQIIVATPGRLLDHIENKGSFSVRLMGLKMLVLDEADHLLDLGF 457


>ref|XP_003524465.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Glycine max]
          Length = 524

 Score =  342 bits (876), Expect = 6e-92
 Identities = 182/249 (73%), Positives = 201/249 (80%), Gaps = 16/249 (6%)
 Frame = -3

Query: 701 SIASLGKYDVKREKRVMPKPYDEDADFSEQVELIKYQLNKRKLSQSEDHHGEEQHN---I 531
           S ASLG+YDVKRE+RV+PK        S + E I Y+LNKRKLSQ ED   E+Q +   I
Sbjct: 184 SSASLGEYDVKRERRVVPKT-------SPEFEFISYELNKRKLSQIEDQQSEQQQSNESI 236

Query: 530 LSQTRF-------------DECAISPLTIKALSLAGYIHMTRVQETSLPICLQGMDASVK 390
           LS TR              DEC ISPLT+KALS AGY+HMTR++E SLPICL+GMDA VK
Sbjct: 237 LSNTRLKWLMQPQLCLQSLDECGISPLTVKALSSAGYVHMTRIREASLPICLEGMDAVVK 296

Query: 389 AKTGTGKSAAFLLPAIETAVKAMTSNTSQRVPPILVLILCPTRELASQIAAEAKVLLKYH 210
           AKTGTGK+ AFLLPAIET +KAM+SNTSQRVPPI VLILCPTRELA+Q+AA AKVLLKYH
Sbjct: 297 AKTGTGKNVAFLLPAIETVLKAMSSNTSQRVPPIYVLILCPTRELANQVAAVAKVLLKYH 356

Query: 209 DGIGVQTLVGGVRFKVDQKRLESDPCQILVATPGRLLDHIENKSGISARLMGLQMLVLDE 30
           D I VQTLVGG+RFKVDQKRLESDPCQILVATPGRLLDHIENKSGIS RLMGL+ LVLDE
Sbjct: 357 DAIRVQTLVGGIRFKVDQKRLESDPCQILVATPGRLLDHIENKSGISLRLMGLRTLVLDE 416

Query: 29  ADHLLDLGF 3
           ADHLLDLGF
Sbjct: 417 ADHLLDLGF 425


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score =  323 bits (828), Expect = 2e-86
 Identities = 162/233 (69%), Positives = 195/233 (83%)
 Frame = -3

Query: 701 SIASLGKYDVKREKRVMPKPYDEDADFSEQVELIKYQLNKRKLSQSEDHHGEEQHNILSQ 522
           S ASLGK DV+ +KRV  KP+DE++DF+EQVEL++Y+L+K+  ++ E    EE   I ++
Sbjct: 286 SSASLGKCDVRMKKRVPLKPFDEESDFAEQVELLRYELSKKSAAEEEGEKREEI--IFTE 343

Query: 521 TRFDECAISPLTIKALSLAGYIHMTRVQETSLPICLQGMDASVKAKTGTGKSAAFLLPAI 342
            RFDEC ISPLT+KALS +GY+ MTRVQE +L +CL+G D  VK+KTG+GKS AFLLPAI
Sbjct: 344 KRFDECGISPLTVKALSFSGYVRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFLLPAI 403

Query: 341 ETAVKAMTSNTSQRVPPILVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGVRFKV 162
           E  +KA  S+++QRVPPI VLILCPTRELA QIAAEA VLLKYHDGIGVQTLVGG RFK 
Sbjct: 404 EAVLKAACSSSNQRVPPIFVLILCPTRELACQIAAEANVLLKYHDGIGVQTLVGGTRFKD 463

Query: 161 DQKRLESDPCQILVATPGRLLDHIENKSGISARLMGLQMLVLDEADHLLDLGF 3
           DQKRLES P QI+VATPGRLLDH+EN+SG+S RLMGL+ML+LDEADHLLDLGF
Sbjct: 464 DQKRLESFPSQIIVATPGRLLDHVENRSGLSLRLMGLKMLILDEADHLLDLGF 516


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score =  310 bits (795), Expect = 1e-82
 Identities = 164/236 (69%), Positives = 186/236 (78%), Gaps = 3/236 (1%)
 Frame = -3

Query: 701 SIASLGKYDVKREKRVMPKPYDEDADFSEQVELIKYQL-NKRKLSQSEDHHGE--EQHNI 531
           S A+LGKYDVK  KRV  K  +E+ DF    E I+Y+L NK KL +++    E  EQ +I
Sbjct: 243 SRAALGKYDVKISKRVPLKELEEETDF----EFIRYELENKMKLDRNDREKSEIDEQESI 298

Query: 530 LSQTRFDECAISPLTIKALSLAGYIHMTRVQETSLPICLQGMDASVKAKTGTGKSAAFLL 351
           L Q RFDEC ISPLT+KAL+ AGY+ MTRVQE +L  CL+G DA VKAKTGTGKSAAFLL
Sbjct: 299 LGQRRFDECGISPLTVKALTTAGYVQMTRVQEATLSACLEGKDALVKAKTGTGKSAAFLL 358

Query: 350 PAIETAVKAMTSNTSQRVPPILVLILCPTRELASQIAAEAKVLLKYHDGIGVQTLVGGVR 171
           PAIE  +KA +SN   RV PI VLILCPTRELASQIAAEA  +LKYHDGI VQTLVGG R
Sbjct: 359 PAIEAVLKAKSSNVKPRVSPIYVLILCPTRELASQIAAEANAMLKYHDGISVQTLVGGTR 418

Query: 170 FKVDQKRLESDPCQILVATPGRLLDHIENKSGISARLMGLQMLVLDEADHLLDLGF 3
           FK DQKRLE +PCQI+VATPGRLLDHIENK G+S  LMGL+ML+LDEADHLLDLGF
Sbjct: 419 FKDDQKRLEMNPCQIIVATPGRLLDHIENKGGLSVHLMGLKMLILDEADHLLDLGF 474


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