BLASTX nr result

ID: Glycyrrhiza23_contig00019873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019873
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518948.1| PREDICTED: uncharacterized protein LOC100808...   115   1e-23
ref|NP_001235126.1| uncharacterized protein LOC100527115 precurs...   113   6e-23
ref|XP_002520688.1| conserved hypothetical protein [Ricinus comm...    62   1e-07
ref|XP_002321036.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-07
gb|ABK92873.1| unknown [Populus trichocarpa]                           58   3e-06

>ref|XP_003518948.1| PREDICTED: uncharacterized protein LOC100808717 [Glycine max]
          Length = 139

 Score =  115 bits (289), Expect = 1e-23
 Identities = 71/126 (56%), Positives = 77/126 (61%), Gaps = 2/126 (1%)
 Frame = -2

Query: 641 MACTCS-LALGTRQNMHVSTISAAPTTLPGAPL-FSPTLSPDIEPLFPTPGGAAYXXXXX 468
           MA  CS LA  +RQ+MHVSTISAAPTTLPGAPL FSPT+SPDIEPLFPTPG AA+     
Sbjct: 15  MAYNCSSLASASRQSMHVSTISAAPTTLPGAPLYFSPTISPDIEPLFPTPGRAAFSPSES 74

Query: 467 XXXXXXXXXXXXXXXPFGHPGPVLXXXXXXXXXXXXXXSHGASLLPLCSILHLAIKVICI 288
                              PG VL              SHGAS LPL S+LHLAI VICI
Sbjct: 75  SIPTIPSSPSPPNPDVTNSPGSVLAFPPSESMPAMAPSSHGAS-LPLYSVLHLAILVICI 133

Query: 287 VQLHGM 270
           +QLHGM
Sbjct: 134 MQLHGM 139


>ref|NP_001235126.1| uncharacterized protein LOC100527115 precursor [Glycine max]
           gi|255631588|gb|ACU16161.1| unknown [Glycine max]
          Length = 140

 Score =  113 bits (282), Expect = 6e-23
 Identities = 70/128 (54%), Positives = 79/128 (61%), Gaps = 3/128 (2%)
 Frame = -2

Query: 644 LMACTCS-LALGTRQNMHVSTISAAPTTLPGAPL-FSPTLSPDIEPLFPTPGGAAYXXXX 471
           LMAC CS LA  +RQ+MHVSTISAAPTTLPGAPL +SPT+SPDIEPLFPTPGG+A+    
Sbjct: 14  LMACNCSSLASASRQSMHVSTISAAPTTLPGAPLYYSPTMSPDIEPLFPTPGGSAFSPSE 73

Query: 470 XXXXXXXXXXXXXXXXPFGHPGPVLXXXXXXXXXXXXXXSHGASLLPLCSILHLAIKV-I 294
                               PG VL              S GAS LP+ S+LHLAI V I
Sbjct: 74  SSIPTIPSSPSPPNPDVTNSPGSVLAFPPSESMPAMAPSSKGAS-LPVYSVLHLAILVII 132

Query: 293 CIVQLHGM 270
           CI+QLHGM
Sbjct: 133 CIMQLHGM 140


>ref|XP_002520688.1| conserved hypothetical protein [Ricinus communis]
           gi|223540073|gb|EEF41650.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 52/150 (34%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
 Frame = +1

Query: 268 HMP*SCTMQITFIAR-CKIEHSGRSDAPWEEGAEAGIDSDXXXXXXXXXXXXXXXXXXXX 444
           H   SC+ Q T   R CK +H   +D   E   EAG D D                    
Sbjct: 22  HQAESCSKQNTIRPRKCKAKHR-IADEVKEVADEAGKDPDGEIPNTGPGASGLIISGFGG 80

Query: 445 XXX--IVGNEESDGE*AAPPGVGNNGSISGDSVG------EKRGAPGNVVGAAEMVETCM 600
                +VG+E+S GE  A P VG  GSISGD +       E++G  G   GAA++VE C 
Sbjct: 81  LGLEGMVGSEDSAGEGTAAPVVGKTGSISGDKLEVGGGEVEEKGGSGKRAGAADIVEYCT 140

Query: 601 FCRVP--KANEQVHAINAINIAENDQKEAI 684
            C     KA+++ +A+   N A+ND++EAI
Sbjct: 141 -CSTSDVKASDEKYAMKITNFAKNDEEEAI 169


>ref|XP_002321036.1| predicted protein [Populus trichocarpa] gi|222861809|gb|EEE99351.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 45/125 (36%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
 Frame = -2

Query: 641 MACTCSLALGTRQNMHVSTISAAPTTLPGAPLFSP-TLSPDIEPLFPTPGGAAYXXXXXX 465
           MA   S AL ++ +  +STISAAP  LP APL SP TLSPDIEPL PTPG  A       
Sbjct: 16  MAFFSSPALASQIHARISTISAAPAFLPVAPLSSPPTLSPDIEPLLPTPGAGAPSPTESS 75

Query: 464 XXXXXXXXXXXXXXPFGHPGPVLXXXXXXXXXXXXXXSHGASLLPLCSILHLAIKVICIV 285
                             PGP                    S  PL     L + V+C +
Sbjct: 76  LPTIPSSRSPPNPGDILAPGPARFSISPSGSLPASSSVSTTSSGPLNLAFFLGLLVLCSM 135

Query: 284 QLHGM 270
           QL G+
Sbjct: 136 QLSGV 140


>gb|ABK92873.1| unknown [Populus trichocarpa]
          Length = 141

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = -2

Query: 644 LMACTCSLALGTRQNMHVSTISAAPTTLPGAPLFSP-TLSPDIEPLFPTPGGAA 486
           LMA   S AL ++ ++  STISAAP  L  AP FSP TLSPDIEPLFPTPG  A
Sbjct: 15  LMAYFSSPALTSQIHVQFSTISAAPAFLHDAPSFSPPTLSPDIEPLFPTPGVGA 68


Top