BLASTX nr result

ID: Glycyrrhiza23_contig00019834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00019834
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529979.1| PREDICTED: alpha-1,4-galacturonosyltransfera...    78   1e-12
ref|XP_003623804.1| Alpha-1,4-galacturonosyltransferase [Medicag...    65   9e-09
ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransfera...    65   1e-08
ref|XP_003533632.1| PREDICTED: alpha-1,4-galacturonosyltransfera...    65   1e-08
emb|CBI38820.3| unnamed protein product [Vitis vinifera]               65   1e-08

>ref|XP_003529979.1| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Glycine max]
          Length = 734

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/50 (76%), Positives = 42/50 (84%)
 Frame = +1

Query: 442 GFHVADQDNILAVPSTQVAKWREWQALQDLKSLFSKEVFDVIVSSTNDMG 591
           G  V ++D I AVPS QV KWREWQALQDLKSLFS+EV DVIVSSTND+G
Sbjct: 103 GEMVVNEDYISAVPSKQVGKWREWQALQDLKSLFSEEVLDVIVSSTNDLG 152


>ref|XP_003623804.1| Alpha-1,4-galacturonosyltransferase [Medicago truncatula]
           gi|355498819|gb|AES80022.1|
           Alpha-1,4-galacturonosyltransferase [Medicago
           truncatula]
          Length = 678

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 38/84 (45%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = +1

Query: 343 LPLTKNRSKGSRXXXXXXXXXXXXXXXIFFLGRGFHVA-DQDNILAVPSTQVAKWREWQA 519
           +PL      GS                IFF     H + D + I  V S Q  KWRE +A
Sbjct: 1   MPLNNRTKGGSSFPLLAFVLLCLLAPLIFFFASSLHTSSDHNGISDVTSQQATKWREQKA 60

Query: 520 LQDLKSLFSKEVFDVIVSSTNDMG 591
           L DLKSLF KEV DVI SSTNDMG
Sbjct: 61  LHDLKSLFPKEVLDVIKSSTNDMG 84


>ref|XP_002272447.2| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Vitis
           vinifera]
          Length = 654

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = +1

Query: 325 MAPKRGLP---LTKNRSKGSRXXXXXXXXXXXXXXXIFFLGRGFHVADQDNILAVPSTQV 495
           MA +RGL    L +NR   SR               IFF+GRG +  D  ++ +  S Q 
Sbjct: 1   MALRRGLSGAALQRNRPSRSRLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSSKQD 60

Query: 496 AKWREWQALQDLKSLFSKEVFDVIVSSTNDMG 591
             WRE  ALQ +KSL SKEV D+I ++T+D+G
Sbjct: 61  VDWRERLALQHIKSLLSKEVIDIITATTDDLG 92


>ref|XP_003533632.1| PREDICTED: alpha-1,4-galacturonosyltransferase 1-like [Glycine max]
          Length = 664

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/78 (48%), Positives = 47/78 (60%)
 Frame = +1

Query: 358 NRSKGSRXXXXXXXXXXXXXXXIFFLGRGFHVADQDNILAVPSTQVAKWREWQALQDLKS 537
           NR+KGS                +FF      + D+ +  AV   +VAK +EWQALQDLKS
Sbjct: 6   NRTKGSHFPLLAFLFLCLLAPLLFFFFAS-PLHDRSDNSAVSIEKVAKLKEWQALQDLKS 64

Query: 538 LFSKEVFDVIVSSTNDMG 591
           LFSKEV DVIVS+TND+G
Sbjct: 65  LFSKEVLDVIVSNTNDVG 82


>emb|CBI38820.3| unnamed protein product [Vitis vinifera]
          Length = 681

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = +1

Query: 325 MAPKRGLP---LTKNRSKGSRXXXXXXXXXXXXXXXIFFLGRGFHVADQDNILAVPSTQV 495
           MA +RGL    L +NR   SR               IFF+GRG +  D  ++ +  S Q 
Sbjct: 1   MALRRGLSGAALQRNRPSRSRLPLAVVISLSLLAPLIFFVGRGIYTIDHTDVTSSSSKQD 60

Query: 496 AKWREWQALQDLKSLFSKEVFDVIVSSTNDMG 591
             WRE  ALQ +KSL SKEV D+I ++T+D+G
Sbjct: 61  VDWRERLALQHIKSLLSKEVIDIITATTDDLG 92


Top